KEGG   Drosophila melanogaster (fruit fly): Dmel_CG7504
Entry
Dmel_CG7504       CDS       T00030                                 
Symbol
Setx
Name
(RefSeq) senataxin, isoform B
  KO
K10706  ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG7504 (Setx)
Enzymes [BR:dme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Dmel_CG7504 (Setx)
    5.6.2.5  RNA 5'-3' helicase
     Dmel_CG7504 (Setx)
Transcription machinery [BR:dme03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Dmel_CG7504 (Setx)
SSDB
Motif
Pfam: AAA_11 AAA_12 FHA AAA_19 Yop-YscD_cpl AAA_30 AAA_16 NPHP3_N AAA_22 AAA_25 AAA_23
Other DBs
NCBI-GeneID: 38904
NCBI-ProteinID: NP_001137907
FlyBase: FBgn0035842
UniProt: B7Z0D7
LinkDB
Position
3L
AA seq 1676 aa
MSSVWYLEHVTTGARLILHNGTNLMGRHSRCRIILGGQYQFVSREHANIIVSEKGVEVES
LNPLNGLFINGGKLGDKINRLAVAEGSTISLGVTGVNLNEITGIHAIFILKKKEPVVEEI
VLSSDDDDTTPLPAVRCPTGTQPTEFNLKQQIPNFGGKQDPGQEEEVLPSSSNLHLPKLT
EVKQEIVKHTSEEIQNIFGEPSDAILNSVLELNPYLYNKLTNKTANNEITRKKIHDGDCI
ELDTDTDRRSISEAQKAEDPSAEREVDDEEEYDESFAMSQAVIREMKAEMHVSDGEEDFL
LTNGMGNLPEGSPSNQAYDDIVYVSDSDDDELYDKVADWSKLLSQKVVPDVIEMSQTYPL
ENEHKDSDSDLDIGAKKPKRTLRISSSSDEDSADEVIVHQTKQKGRRSKSKSPNDHVVRQ
ADSTTPDLPAVRKLSVSSIDSVYENKQTKLNSKLKSCLKSPTKTSVDNMENMTETKSCSN
RQREQIVASRNEPTNICPQKIETNKTSTRKRFVSTTSRDELSTTSKEIKDAPKNNVEPPK
KMLRSRSKSCYIDRPVELDEHITKNEVPLKKKYESVDNSKEELIVTLEAPAMLTTPTKSK
TQCVKKKATQTRGRRKTIHSRDEIRSLTAEAEENKKISPAKQTNEEIPIPTKSPLKRNAR
LLNRSKSCYMDRLVISETEDPAKKVIKDISPTKSDTTDNVLNFVDVRQTRGPSVIEAPSL
PKNRGKLRGVSAEVKVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEKLKECRREALK
KLSEKPKENSHRSTTNKRKNPTSVPTVQNTNRGGFLTKGVDGPAPKLAKTDNAKPPPKKP
VPKQPPAIETFSQQLQAADKAVLHPQPQCSRPVERKEAELARNQRTCNKVTFAEMELYHQ
KAEDSKKLQKKLRKVHFNDDVKVHCIERVKGASSKVQGRKECIKLRLSSYRERREWIRRE
NKPVNDIRQHSRSILKWANQWLKHGSVDAVAEQDVLMPIPPEFDSFKNYREIFVPLMKLE
LLSTIERDYKINNKNTFSVSLINVETQDMCYRLVTRVNSKPFGKFVLYTLYCCGMLKETF
ANLLELKFVSGNVFDLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRS
SPLCRRILKPTQTVNEVSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQG
PPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRDQFH
LLRFGMHEKMSHYSRPFSLEAHFNKAKEQKLQRVSKENAEILKKQHNDLKDEIQQLKEKT
NLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLAN
YVDFFDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMF
DRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTARFA
SPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQN
QCYALSQVIPSHMNITPQTVDSYQGLEKDVIIISNARTRGCGFLTNYQRLNVALTRPRRC
LVICGNFEDLKSVEMWRNLLDDARKRKVYFNLDRDDVNDLDRSLIKKMMVNTINLI
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgagcagcgtgtggtacctggaacatgtgaccactggcgcacggctcatcctgcacaac
ggcactaatttgatgggtcgccactcgcgttgcaggataatcttgggtggacagtaccaa
tttgtgtcccgggagcacgccaatatcatcgtgagcgaaaagggcgttgaggttgagtct
ctgaaccccctgaatgggctcttcatcaacgggggcaaattgggcgacaagatcaaccgt
ctggcagtagctgagggctccacaatcagcctaggagtcacgggagtcaacctaaatgaa
ataactggcatacatgctatattcatcctaaagaaaaaggagccggtagtcgaggaaatc
gttctgtcgtccgacgatgacgatacaacaccactgcccgccgtgcgatgccccactggc
actcagcccaccgagttcaatctgaaacagcaaataccaaactttggcggcaaacaggac
cccggccaggaagaggaagtactaccttcgagttccaatttgcatctaccaaaactaaca
gaagttaagcaggaaatcgtaaagcatacctccgaagagatacaaaacatttttggtgaa
ccaagtgacgctattctgaattctgtattggaactaaatccatatctgtacaacaagcta
actaacaagaccgcgaacaatgaaataacccgcaaaaaaatacacgacggcgactgtata
gaactggacacggatacggataggaggagcatttcggaggcgcagaaagccgaagaccct
tcggcagagcgggaagtagacgacgaggaagaatacgatgagagtttcgccatgtctcag
gcagtgatcagggaaatgaaggccgaaatgcacgtaagtgatggcgaagaagacttcttg
ctgaccaatggcatgggaaacttgcctgaaggttctccatcgaaccaagcttacgacgac
atcgtctacgtcagcgattccgatgacgatgagctgtacgataaggtggcggattggtca
aagctgctaagccaaaaggtggtaccagacgtcatagaaatgtcgcagacctatccgcta
gagaatgaacacaaagattcagactcagacttagatattggagcaaaaaaaccgaaaagg
acactgcggatctcatcctccagtgacgaagactctgcagacgaagtgattgtccatcaa
acaaaacaaaagggaaggcgctccaaatcgaaatctccaaacgaccatgttgtgcggcag
gccgacagcacgactccggatcttccagctgttcgtaaattatccgtctcatctattgat
tctgtatatgaaaataaacagacaaaattaaactctaagcttaagtcgtgcttaaagagc
ccgaccaagacatcagtagataacatggaaaatatgacggaaaccaaaagttgctcaaac
cgtcagcgcgagcaaatagttgcatcccgaaatgaaccaactaatatctgtccgcaaaag
attgagactaacaaaacctcaacccgtaagcgattcgtatcgaccacttctcgggatgag
ttatctaccacttcaaaagaaatcaaagatgctcctaaaaataatgtggaacctcctaaa
aaaatgttgcgcagccgttcaaaatcctgttatatagataggcctgtggaattggatgaa
cacataaccaaaaatgaagtgccccttaagaagaaatatgaaagtgttgataatagtaag
gaagaactgatagtaaccctggaggctccagcaatgttaacgacacctactaaatctaaa
acccaatgtgttaaaaaaaaagcaacgcagactcgcggcagacgaaagacaatacacagc
cgtgatgaaataagatccttgacagctgaggctgaggaaaataaaaagatttcaccagca
aaacagaccaacgaagaaatccctattccaactaaaagtcctcttaaaaggaatgcgcgg
ctgctcaaccgatcaaaatcgtgctatatggatcgtctggtgatctcggaaaccgaagat
cctgccaagaaggtgattaaggatatatctccaactaaaagcgacactacagacaacgtt
ctaaactttgttgatgtgagacagacacgcggcccctctgtgattgaggctccatccttg
cccaaaaatcgaggtaagcttcgaggggtctcggctgaggtgaaagttaaagataaggtg
ctagatcgccagcgttttattgactatcaagccgaaatgaacgctaaatggaagcagaaa
cccaaagacaagaaaaaagaagacgaaaagctaaaagagtgccgccgcgaagccctcaag
aagctgtctgaaaaaccaaaggaaaatagtcatcgttcaacaaccaataagagaaagaat
cctacaagtgttcccaccgttcaaaacaccaatcgtggcggatttttaacgaaaggagtg
gatggcccagccccaaaactggcaaagacggataacgctaagccaccaccaaagaaacca
gttcccaaacaaccacccgctatcgaaacgttctcacagcagctccaagcagctgataaa
gctgttctgcatccgcagccacagtgctcgcgtccagtagaacggaaagaagcggagctg
gcgaggaatcagcgcacttgtaacaaagttacctttgctgaaatggagctttaccatcaa
aaagccgaagactcaaagaagctacaaaagaaactgcgtaaggtgcatttcaacgatgat
gtgaaagtacactgtatcgaaagggttaagggagccagttctaaggttcagggccgcaag
gagtgcataaagctccgcctcagctcctaccgcgaacgccgcgaatggattcgaagggaa
aataaaccagtgaacgacatacgccagcactctcggagtatcctaaagtgggctaaccaa
tggctaaagcatggcagcgtagatgcggttgctgaacaagatgtcttaatgcccattcca
cctgaatttgatagctttaagaactatagagagatatttgtgcccttgatgaaactggag
ctgctttccaccatcgaaagagactacaaaattaacaataaaaacactttttcggtcagc
ttaataaacgttgaaacgcaggatatgtgctaccgtttggttaccagagtcaatagcaaa
ccattcggaaaattcgtcctttataccctttactgttgtggcatgctaaaagagaccttt
gccaatctgttggagcttaagtttgtctcaggcaacgtattcgacttaacatttgagatc
ctgaaacaagatatatccgaggagaagctcaaaaacattaagcagttgactgcacggcca
gtagtggacagcttaagggtggagcttggcgctttgagtgccgtccatcagctccgtagc
tctccgctctgccggcggatcttgaagcctacgcaaacagtcaatgaggtttcactccct
aaacagccgtttacgttcaaggggtgccacaagttaaatgaacatcaggagaacattgtc
ctgcatacctatcaacgtataattgacgacttacaaccgagtctcactctgatccagggt
ccccccgggaccggaaagtcaagagttatttcggaactatgtctgcagactttgtacgga
aatgctgccaaaacgctggaccgcaaaatcttgatatgtgctcattccaatacagctgta
gatcatattgttgggctgctaggctcagttttgcgtgtgatgaaccgcgaccaattccac
ctactacgttttggaatgcacgagaagatgagccactactctcgtccattttcgctggag
gcgcatttcaacaaagccaaggagcagaagttgcagcgcgttagtaaagagaacgctgaa
atcctaaaaaagcagcataatgatcttaaagatgagattcaacagctgaaggagaaaacg
aatctcacgtcaacgtatctcttgcaacagttgcaacagaaggaaaaaaaactgcagctg
ataagtaaccaactgagtccgccgctgacgcagcgcgaggagtttgaaatctctcacatg
tgcgtgaccagggcgaacatcatctgcacaacgctttcctcttgtgtaaaactggcaaac
tatgtagatttctttgacatatgcatcgtcgacgaggccacacaatgtaccgagccctgg
actttactgccaatgcgatttggattaacgcatatggtcttggttggcgacatgcagcaa
cttccggctgtggtgctgtccaagaaggccatagactttggcctttctaattcaatgttt
gatcgcattcagcgaagcctgcagacacagcttgataagccgggaagttatcacttaatg
catacgaaactatttaagctgagcacgcagtaccgcatgcatccagagatctgtcgatgg
ccaaaccagtatttctacgaggatcagttgataaacgccgagtgtactgctcgtttcgcc
tcaccgctcattccatactgcgttattaatttaaaatacacttgcgacagcaatggcgcc
caaaacaagagtatcagcaataacgaggaggctcgttttgtggccaaacttctgacagaa
atggacaaacatatgcccagcaagcgatttagctatggattaatttcgccgtaccaaaac
cagtgttacgcgctaagccaggttattcccagtcacatgaatataactcctcagactgtg
gactcgtatcaaggattggaaaaggatgtgataataatttcaaatgccaggacacgcggc
tgtggctttctaacgaactatcagcgacttaatgtggcgctgaccagaccgcgtcgttgt
ctagtcatatgtggcaattttgaagatctaaaatctgttgaaatgtggcgcaaccttctc
gatgatgctcgcaagaggaaagtttacttcaatttggaccgcgatgatgtgaacgaccta
gaccgttccttaatcaaaaagatgatggtgaatactatcaacttaatttag

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