Drosophila melanogaster (fruit fly): Dmel_CG7504
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Entry
Dmel_CG7504 CDS
T00030
Symbol
Setx
Name
(RefSeq) senataxin, isoform B
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
dme
Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dme03021
]
Dmel_CG7504 (Setx)
Enzymes [BR:
dme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Dmel_CG7504 (Setx)
5.6.2.5 RNA 5'-3' helicase
Dmel_CG7504 (Setx)
Transcription machinery [BR:
dme03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Dmel_CG7504 (Setx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
AAA_19
Yop-YscD_cpl
AAA_30
AAA_16
NPHP3_N
AAA_22
AAA_25
AAA_23
Motif
Other DBs
NCBI-GeneID:
38904
NCBI-ProteinID:
NP_001137907
FlyBase:
FBgn0035842
UniProt:
B7Z0D7
LinkDB
All DBs
Position
3L
Genome browser
AA seq
1676 aa
AA seq
DB search
MSSVWYLEHVTTGARLILHNGTNLMGRHSRCRIILGGQYQFVSREHANIIVSEKGVEVES
LNPLNGLFINGGKLGDKINRLAVAEGSTISLGVTGVNLNEITGIHAIFILKKKEPVVEEI
VLSSDDDDTTPLPAVRCPTGTQPTEFNLKQQIPNFGGKQDPGQEEEVLPSSSNLHLPKLT
EVKQEIVKHTSEEIQNIFGEPSDAILNSVLELNPYLYNKLTNKTANNEITRKKIHDGDCI
ELDTDTDRRSISEAQKAEDPSAEREVDDEEEYDESFAMSQAVIREMKAEMHVSDGEEDFL
LTNGMGNLPEGSPSNQAYDDIVYVSDSDDDELYDKVADWSKLLSQKVVPDVIEMSQTYPL
ENEHKDSDSDLDIGAKKPKRTLRISSSSDEDSADEVIVHQTKQKGRRSKSKSPNDHVVRQ
ADSTTPDLPAVRKLSVSSIDSVYENKQTKLNSKLKSCLKSPTKTSVDNMENMTETKSCSN
RQREQIVASRNEPTNICPQKIETNKTSTRKRFVSTTSRDELSTTSKEIKDAPKNNVEPPK
KMLRSRSKSCYIDRPVELDEHITKNEVPLKKKYESVDNSKEELIVTLEAPAMLTTPTKSK
TQCVKKKATQTRGRRKTIHSRDEIRSLTAEAEENKKISPAKQTNEEIPIPTKSPLKRNAR
LLNRSKSCYMDRLVISETEDPAKKVIKDISPTKSDTTDNVLNFVDVRQTRGPSVIEAPSL
PKNRGKLRGVSAEVKVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEKLKECRREALK
KLSEKPKENSHRSTTNKRKNPTSVPTVQNTNRGGFLTKGVDGPAPKLAKTDNAKPPPKKP
VPKQPPAIETFSQQLQAADKAVLHPQPQCSRPVERKEAELARNQRTCNKVTFAEMELYHQ
KAEDSKKLQKKLRKVHFNDDVKVHCIERVKGASSKVQGRKECIKLRLSSYRERREWIRRE
NKPVNDIRQHSRSILKWANQWLKHGSVDAVAEQDVLMPIPPEFDSFKNYREIFVPLMKLE
LLSTIERDYKINNKNTFSVSLINVETQDMCYRLVTRVNSKPFGKFVLYTLYCCGMLKETF
ANLLELKFVSGNVFDLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRS
SPLCRRILKPTQTVNEVSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQG
PPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRDQFH
LLRFGMHEKMSHYSRPFSLEAHFNKAKEQKLQRVSKENAEILKKQHNDLKDEIQQLKEKT
NLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLAN
YVDFFDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMF
DRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTARFA
SPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQN
QCYALSQVIPSHMNITPQTVDSYQGLEKDVIIISNARTRGCGFLTNYQRLNVALTRPRRC
LVICGNFEDLKSVEMWRNLLDDARKRKVYFNLDRDDVNDLDRSLIKKMMVNTINLI
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtgtggtacctggaacatgtgaccactggcgcacggctcatcctgcacaac
ggcactaatttgatgggtcgccactcgcgttgcaggataatcttgggtggacagtaccaa
tttgtgtcccgggagcacgccaatatcatcgtgagcgaaaagggcgttgaggttgagtct
ctgaaccccctgaatgggctcttcatcaacgggggcaaattgggcgacaagatcaaccgt
ctggcagtagctgagggctccacaatcagcctaggagtcacgggagtcaacctaaatgaa
ataactggcatacatgctatattcatcctaaagaaaaaggagccggtagtcgaggaaatc
gttctgtcgtccgacgatgacgatacaacaccactgcccgccgtgcgatgccccactggc
actcagcccaccgagttcaatctgaaacagcaaataccaaactttggcggcaaacaggac
cccggccaggaagaggaagtactaccttcgagttccaatttgcatctaccaaaactaaca
gaagttaagcaggaaatcgtaaagcatacctccgaagagatacaaaacatttttggtgaa
ccaagtgacgctattctgaattctgtattggaactaaatccatatctgtacaacaagcta
actaacaagaccgcgaacaatgaaataacccgcaaaaaaatacacgacggcgactgtata
gaactggacacggatacggataggaggagcatttcggaggcgcagaaagccgaagaccct
tcggcagagcgggaagtagacgacgaggaagaatacgatgagagtttcgccatgtctcag
gcagtgatcagggaaatgaaggccgaaatgcacgtaagtgatggcgaagaagacttcttg
ctgaccaatggcatgggaaacttgcctgaaggttctccatcgaaccaagcttacgacgac
atcgtctacgtcagcgattccgatgacgatgagctgtacgataaggtggcggattggtca
aagctgctaagccaaaaggtggtaccagacgtcatagaaatgtcgcagacctatccgcta
gagaatgaacacaaagattcagactcagacttagatattggagcaaaaaaaccgaaaagg
acactgcggatctcatcctccagtgacgaagactctgcagacgaagtgattgtccatcaa
acaaaacaaaagggaaggcgctccaaatcgaaatctccaaacgaccatgttgtgcggcag
gccgacagcacgactccggatcttccagctgttcgtaaattatccgtctcatctattgat
tctgtatatgaaaataaacagacaaaattaaactctaagcttaagtcgtgcttaaagagc
ccgaccaagacatcagtagataacatggaaaatatgacggaaaccaaaagttgctcaaac
cgtcagcgcgagcaaatagttgcatcccgaaatgaaccaactaatatctgtccgcaaaag
attgagactaacaaaacctcaacccgtaagcgattcgtatcgaccacttctcgggatgag
ttatctaccacttcaaaagaaatcaaagatgctcctaaaaataatgtggaacctcctaaa
aaaatgttgcgcagccgttcaaaatcctgttatatagataggcctgtggaattggatgaa
cacataaccaaaaatgaagtgccccttaagaagaaatatgaaagtgttgataatagtaag
gaagaactgatagtaaccctggaggctccagcaatgttaacgacacctactaaatctaaa
acccaatgtgttaaaaaaaaagcaacgcagactcgcggcagacgaaagacaatacacagc
cgtgatgaaataagatccttgacagctgaggctgaggaaaataaaaagatttcaccagca
aaacagaccaacgaagaaatccctattccaactaaaagtcctcttaaaaggaatgcgcgg
ctgctcaaccgatcaaaatcgtgctatatggatcgtctggtgatctcggaaaccgaagat
cctgccaagaaggtgattaaggatatatctccaactaaaagcgacactacagacaacgtt
ctaaactttgttgatgtgagacagacacgcggcccctctgtgattgaggctccatccttg
cccaaaaatcgaggtaagcttcgaggggtctcggctgaggtgaaagttaaagataaggtg
ctagatcgccagcgttttattgactatcaagccgaaatgaacgctaaatggaagcagaaa
cccaaagacaagaaaaaagaagacgaaaagctaaaagagtgccgccgcgaagccctcaag
aagctgtctgaaaaaccaaaggaaaatagtcatcgttcaacaaccaataagagaaagaat
cctacaagtgttcccaccgttcaaaacaccaatcgtggcggatttttaacgaaaggagtg
gatggcccagccccaaaactggcaaagacggataacgctaagccaccaccaaagaaacca
gttcccaaacaaccacccgctatcgaaacgttctcacagcagctccaagcagctgataaa
gctgttctgcatccgcagccacagtgctcgcgtccagtagaacggaaagaagcggagctg
gcgaggaatcagcgcacttgtaacaaagttacctttgctgaaatggagctttaccatcaa
aaagccgaagactcaaagaagctacaaaagaaactgcgtaaggtgcatttcaacgatgat
gtgaaagtacactgtatcgaaagggttaagggagccagttctaaggttcagggccgcaag
gagtgcataaagctccgcctcagctcctaccgcgaacgccgcgaatggattcgaagggaa
aataaaccagtgaacgacatacgccagcactctcggagtatcctaaagtgggctaaccaa
tggctaaagcatggcagcgtagatgcggttgctgaacaagatgtcttaatgcccattcca
cctgaatttgatagctttaagaactatagagagatatttgtgcccttgatgaaactggag
ctgctttccaccatcgaaagagactacaaaattaacaataaaaacactttttcggtcagc
ttaataaacgttgaaacgcaggatatgtgctaccgtttggttaccagagtcaatagcaaa
ccattcggaaaattcgtcctttataccctttactgttgtggcatgctaaaagagaccttt
gccaatctgttggagcttaagtttgtctcaggcaacgtattcgacttaacatttgagatc
ctgaaacaagatatatccgaggagaagctcaaaaacattaagcagttgactgcacggcca
gtagtggacagcttaagggtggagcttggcgctttgagtgccgtccatcagctccgtagc
tctccgctctgccggcggatcttgaagcctacgcaaacagtcaatgaggtttcactccct
aaacagccgtttacgttcaaggggtgccacaagttaaatgaacatcaggagaacattgtc
ctgcatacctatcaacgtataattgacgacttacaaccgagtctcactctgatccagggt
ccccccgggaccggaaagtcaagagttatttcggaactatgtctgcagactttgtacgga
aatgctgccaaaacgctggaccgcaaaatcttgatatgtgctcattccaatacagctgta
gatcatattgttgggctgctaggctcagttttgcgtgtgatgaaccgcgaccaattccac
ctactacgttttggaatgcacgagaagatgagccactactctcgtccattttcgctggag
gcgcatttcaacaaagccaaggagcagaagttgcagcgcgttagtaaagagaacgctgaa
atcctaaaaaagcagcataatgatcttaaagatgagattcaacagctgaaggagaaaacg
aatctcacgtcaacgtatctcttgcaacagttgcaacagaaggaaaaaaaactgcagctg
ataagtaaccaactgagtccgccgctgacgcagcgcgaggagtttgaaatctctcacatg
tgcgtgaccagggcgaacatcatctgcacaacgctttcctcttgtgtaaaactggcaaac
tatgtagatttctttgacatatgcatcgtcgacgaggccacacaatgtaccgagccctgg
actttactgccaatgcgatttggattaacgcatatggtcttggttggcgacatgcagcaa
cttccggctgtggtgctgtccaagaaggccatagactttggcctttctaattcaatgttt
gatcgcattcagcgaagcctgcagacacagcttgataagccgggaagttatcacttaatg
catacgaaactatttaagctgagcacgcagtaccgcatgcatccagagatctgtcgatgg
ccaaaccagtatttctacgaggatcagttgataaacgccgagtgtactgctcgtttcgcc
tcaccgctcattccatactgcgttattaatttaaaatacacttgcgacagcaatggcgcc
caaaacaagagtatcagcaataacgaggaggctcgttttgtggccaaacttctgacagaa
atggacaaacatatgcccagcaagcgatttagctatggattaatttcgccgtaccaaaac
cagtgttacgcgctaagccaggttattcccagtcacatgaatataactcctcagactgtg
gactcgtatcaaggattggaaaaggatgtgataataatttcaaatgccaggacacgcggc
tgtggctttctaacgaactatcagcgacttaatgtggcgctgaccagaccgcgtcgttgt
ctagtcatatgtggcaattttgaagatctaaaatctgttgaaatgtggcgcaaccttctc
gatgatgctcgcaagaggaaagtttacttcaatttggaccgcgatgatgtgaacgaccta
gaccgttccttaatcaaaaagatgatggtgaatactatcaacttaatttag
DBGET
integrated database retrieval system