Drosophila melanogaster (fruit fly): Dmel_CG8232
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Entry
Dmel_CG8232 CDS
T00030
Symbol
PAN2
Name
(RefSeq) Poly(A)-binding protein-dependent poly(A) ribonuclease 2, isoform A
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG8232 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG8232 (PAN2)
Enzymes [BR:
dme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
Dmel_CG8232 (PAN2)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dmel_CG8232 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
Dmel_CG8232 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
WD40_CDC20-Fz
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
35893
NCBI-ProteinID:
NP_610427
FlyBase:
FBgn0033352
UniProt:
A1Z7K9
LinkDB
All DBs
Position
2R
Genome browser
AA seq
1241 aa
AA seq
DB search
MDYVYCGTDPIGASEDILSVYDAGSAPGNGHFSPSFNGFNIGTTDPEYVELVPVLADGGE
HFGVSSVAFDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLAL
TQTSLRHQIRRGLPKFTFKSNNMKEMVSMLQLSPHRLVMAGLQDELIDFDLRTLKETRIE
HVGAGGCTVLRKNSRYLFAGDQLGTVTLRDLNSLSVQHTIKTHTNILSDFSVQGNLLISC
GYSGRQNNLAIDRFLMVYDLRMLRLIAPIQVMIDPQMLKFLPSLTSQLAVVSSYGQVQLV
DTVELSEPRVSMYQINTNGSQCLSFDISSSSQAMAFGDQSGHINMIAAVQTPQPQFNLYS
RSTEFADVVPQLPMVSITDTNFPLSSVMLPHLTTGTQWFSDWPEELLRYRYHRPKTIDPE
VLSNMKMQGPIGYSPNPRTARRNQIPYVIEQGGVCSPNGNGTAAATKAENGVKIIPRRYR
KVELKYTKLGTQDFDFDQHNQTCFAGLEATLPNSYCNAMLQILYFTDALRVKLLEHSCIK
EFCLSCELGFLFNMLDKSTASSPCQASNFLRSFRTVPEASALGLILTDRSSNVNLISLIQ
NWNRFILHQMHYEIFDSSKNASTYSGSVQTSTNAENAGSSETSGSSDLYDSISDENSKED
DRERSKINAETDISKIFGTKQICINRCIKCQEEKIKESILLACNLSYPNHIKDSDQYFNF
GTILKRSLSSEKSIQAFCERCKKFSPTNQSVKVTSLPQILSINCGLNNEKDITFLKRQLN
RCSEKTTVDAAASLSTSKPCRYGANCSRSDCHFMHPDRKSPSHTSQPNAVNNSPNGRQKS
WFPLTFTMGINDQGEVQVQTQSDASSGKSEQEEETEKPPTKGLDNNRMYALHAVVCQVDD
GTQKNLVSLINVQRPYHTMKLAESADDPQSQWYIFNDFSISPVSPQESVWFTLDWKVPCI
LFYRHVEDDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADAT
LQPLQSDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPA
EGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIF
VGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMVSLRFLAWHFLGTKIQSETHDSIED
ARTTLQLYKHYLKLQEEKKFANALKNLYERGKQLQWKVPED
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggattacgtgtattgcggcaccgaccccatcggggcctccgaagacatactaagtgtt
tatgacgcgggatctgcgccgggaaacgggcacttttcgcccagcttcaatggattcaac
atcggcaccaccgatccggaatatgtggagcttgtgcccgtgcttgccgacggcggggag
cacttcggcgtttccagcgtggcgttcgacgactacgaagagctgctgtggatgggcaac
cagggcggccacgtcacatcgtactacacaaactccatgcagaagtacacatcctttcag
gtccacgccaccgacattgtgcgcgacatctccaccctggactccggagtgctggcgctc
acgcagacctcgctgcgtcatcagatccgcaggggtctgcccaagtttaccttcaaatcg
aacaacatgaaggagatggtgagcatgctgcagctatcaccgcatcgtctggtcatggcc
ggactgcaggacgagcttatcgacttcgacctgcgcacgctcaaggaaacccgcatagag
catgtgggtgccggcggatgcacggtgctacgcaagaattcacgttatctgtttgccggc
gaccagctgggaacggtaacgttgcgcgacctgaacagcctgagtgttcagcacacaatc
aagacgcacaccaacatcctttcggacttcagtgtccagggaaatctgctaatctcttgc
ggctacagcggaaggcaaaataacctggccatcgaccgcttcctaatggtctacgatctg
cgcatgctgcgcctgatcgcgcccattcaagtgatgattgatccgcagatgttgaagttc
ctgccatcgctgacatcccaactggccgtcgtgtccagctacggccaggttcagctggtg
gacactgtggagctcagcgagccgcgagtatccatgtaccagatcaacaccaacggcagc
cagtgcctcagcttcgacattagctcctcttcacaggccatggcatttggggaccagtcg
ggccacatcaacatgattgccgctgtacaaacgcctcagccgcagttcaatctctactcg
cgaagcacagagtttgcggacgtggtgccacagctgccgatggtctccattacggacacc
aactttccgctatcgtcggtcatgctaccgcacttgacgacgggcacacaatggttctca
gattggccggaggaactgctgcgctaccgctaccacaggcccaagaccattgatcccgaa
gtgctgagcaacatgaaaatgcagggaccgattggatactcgccaaacccacgcaccgcc
cgtcgtaatcaaattccgtacgtgattgagcagggcggcgtgtgcagtccgaacggaaat
ggaactgcggcggcgaccaaggcggagaacggtgtgaaaatcattccacggcggtatcgc
aaagtcgagctgaagtacacgaagctgggcacccaggactttgactttgaccagcataat
caaacatgtttcgcggggctggaggcaacgctaccgaactcctactgcaatgctatgcta
cagattttgtatttcaccgacgcgcttcgcgtgaagctgctggagcattcgtgcatcaag
gagttttgcctgtcctgcgaactagggttcctcttcaacatgctggataaaagtaccgct
tcttcaccttgccaggccagcaatttcctgcgatctttccgcactgtgccagaggcctcg
gcactgggattgattctcaccgaccgctcatcgaacgtcaatctaatatcgctgatacag
aactggaaccgattcattttgcatcaaatgcattacgaaatattcgattctagcaagaac
gcatccacctacagcggatctgtgcaaacatcaacgaacgcggaaaacgcgggctcttca
gaaacaagtggctcctcggacctttacgattccataagtgatgagaactccaaggaggac
gatcgggaacgcagtaagatcaacgcagaaactgacatcagtaagatctttgggaccaag
caaatctgtataaaccgctgcatcaaatgccaagaagagaagataaaggaaagcattcta
cttgcctgcaatttgtcgtatcccaaccacatcaaagatagtgatcagtatttcaacttt
ggcaccattttgaagcgatctctcagctccgagaagagtattcaggccttctgcgagaga
tgtaagaagttttcgccaaccaatcagagcgtgaaggtgacttcgcttccgcaaattctg
tccattaactgtggcctcaacaacgaaaaagacattaccttcctgaagcgccagctcaat
cgctgcagcgaaaagacgactgttgatgcggccgcttccttgagcacaagcaagccgtgt
cgatatggagccaactgttcgcgaagtgactgccatttcatgcatccggatcgaaaatct
ccatcgcacacaagccaaccgaatgctgtcaacaattctcccaatggacgccaaaagtcc
tggtttccccttacatttactatgggcatcaatgaccaaggtgaggtgcaggtgcaaact
caatcagatgcaagcagtggcaaatcggaacaggaggaggaaacggaaaagccaccaaca
aagggcttggacaacaatcggatgtacgcgctgcatgccgtggtgtgccaagtcgatgat
ggtacccaaaagaacttggtatcgttgataaatgtgcagcggccataccacaccatgaaa
ctggctgaatctgcagatgaccctcagagtcaatggtatatttttaatgattttagcata
tcgcccgtttcgccacaagaatcggtatggttcacattggattggaaagttccttgcata
ctcttctacagacacgtagaggatgactctgagtctgctagtactactagctcgaccgtc
acggaaagtgaagaaaccattccatcagagagcagcagcggctcgccaacaaatctatcc
aacccttttctagaggaaattgtgagtcctatgctaggcaacttaagtgcagacgccacg
ctgcagcccctgcagtcagatgaaatgccgcagtcgggtgatctggtcgcaatggatgcc
gagttcgttaccctaaatccagaggaaaatgagattcgcccggatggcaaaacggcgacc
attaagccatgccacatgagtgtggcccggatttcatgtatacgaggacaaggcccggct
gaaggagttccattcatggacgattacatatccacccaggagaaggtcgtggactaccta
actcagttctcgggaatcaagcctggcgacttggacgctaacttcagcaaaaagcgactg
actgccttgaagtactcataccagaaattaaaatacctcgttgacgtaggagtaatattt
gtcggacatggtctgaagaacgactttagggtcataaacatctatgtaccgtcggagcag
ataatagatacggtgcacctgtttcacatgccacatcatcgcatggtttccctaagattt
ctagcctggcatttcttgggtactaagattcagtccgagacgcacgactccatcgaagat
gcacggaccactctgcagctctacaagcactatttgaagctgcaggaggagaagaagttt
gccaacgctctcaagaatctttacgaacgcggaaagcagctgcagtggaaggttccagag
gactga
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