KEGG   Drosophila melanogaster (fruit fly): Dmel_CG8383
Entry
Dmel_CG8383       CDS       T00030                                 
Symbol
Pnn
Name
(RefSeq) pinin, isoform B
  KO
K13114  pinin
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG8383 (Pnn)
   03015 mRNA surveillance pathway
    Dmel_CG8383 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG8383 (Pnn)
   03041 Spliceosome [BR:dme03041]
    Dmel_CG8383 (Pnn)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Dmel_CG8383 (Pnn)
Spliceosome [BR:dme03041]
 Complex C
  Other components
   EJC/TREX
    Dmel_CG8383 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N G0-G1_switch_2
Other DBs
NCBI-GeneID: 41185
NCBI-ProteinID: NP_001097727
FlyBase: FBgn0037737
UniProt: A8JQW3
LinkDB
Position
3R
AA seq 307 aa
MVNDSGLSTVDDLEQKLNSAKQSLVILNENIRRIAGRVPKESLQRSEKFKYTQDGKKNEH
NGDRPFPRNATPGGVFKDKRRMYESKNPISRFPIEENEGRPPRINSRVIREMPTKKEIVE
AQGTDSESRARNRRMFGSLLGTLQKFCQEESRLKSKEDKKAEIDRKVEKQELQERAMLRK
QRETLFLDRKKKQFEIRRLEYKMARMKDFKVWEATMLNAKNNIRTKTKPHLFFRPKVHSP
RTEKLLSKSKSEADVFIEFRREELEVELKNLENMNFGKMEDDTAIDESFYEEPDDEEQLD
KSLLYVK
NT seq 924 nt   +upstreamnt  +downstreamnt
atggtgaatgactctggtctatcgacagtggacgacttggagcaaaaactgaattcggcc
aagcagtcgctggtgatcctaaatgaaaacattcgccgcattgctggtcgcgtccccaag
gaatccctgcagagatcggaaaaattcaaatacacccaagatggcaagaagaacgagcac
aatggggaccgaccgttcccccgaaatgcaacacccggtggggtcttcaaagacaagcgg
cgaatgtacgaaagcaagaatccaatttcccgtttcccaatcgaagaaaacgagggtcgt
ccgccacggattaactcgcgggtcatccgggagatgccaactaaaaaggagattgtcgag
gcacagggcacagactctgagtcgagggccaggaatcgcaggatgttcggatcgctgttg
ggaaccctacagaagttctgtcaggaggaatcgcgactgaagagcaaggaggataaaaag
gctgagatcgataggaaggtggaaaagcaggaactgcaggaaagagcgatgctgaggaaa
cagcgtgaaacactattcttagataggaaaaaaaagcaattcgagatccgtagattagag
tacaaaatggccagaatgaaggacttcaaggtctgggaagcaactatgttgaatgcgaaa
aataacatccgaacaaaaacgaaaccacatctgttctttaggccaaaagtgcattcgcct
agaacggaaaaattgttgagcaaaagcaaaagtgaagctgatgtgtttatagaattccgg
cgcgaagaattggaagttgagcttaaaaacttggagaacatgaactttgggaagatggaa
gacgatactgcaatagacgaaagtttctatgaagagcctgacgacgaagagcagttggat
aagtctttattatacgttaagtaa

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