KEGG   Drosophila melanogaster (fruit fly): Dmel_CG8440
Entry
Dmel_CG8440       CDS       T00030                                 
Symbol
Lis-1
Name
(RefSeq) Lissencephaly-1, isoform G
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme00565  Ether lipid metabolism
dme01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dme00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    Dmel_CG8440 (Lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG8440 (Lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dme04147]
    Dmel_CG8440 (Lis-1)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Dmel_CG8440 (Lis-1)
Exosome [BR:dme04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Dmel_CG8440 (Lis-1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st LisH_PAC1 eIF2A Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_RIG_1st LisH Nucleoporin_N Beta-prop_IFT140_2nd Beta-prop_WDR11_2nd WD40_like Beta-prop_IP5PC_F CALCOCO1
Other DBs
NCBI-GeneID: 36791
NCBI-ProteinID: NP_001246361
FlyBase: FBgn0015754
UniProt: Q7KNS3 A0A0B4K812
LinkDB
Position
2R
AA seq 411 aa
MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR
LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIF
ALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ
QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRM
VRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGA
DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD
KTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaatggtgttgtcgcagcggcagcgcgaggagcttaaccaagcgattgccgattat
ctgggctcaaatggctacgccgactcattggagaccttccgcaaggaggccgatctcagc
acagaagtggaaaagaaatttggcggactgttggaaaagaagtggacgtccgtgattcgg
ctgcagaagaaagtgatggaactagaggctaagctcactgaagctgagaaggaggtcatc
gagggggcgcccacaaagaacaaacggacgcctggcgagtggatacctcggccgccagag
aagttctccctgaccggtcatcgtgccagcataacgagggtaattttccaccccatcttt
gctcttatggtttccgcatccgaagacgccaccattaggatttgggacttcgaaactggc
gagtacgaacgcagcctgaagggacacacggactctgtgcaggatgtcgcatttgatgcc
cagggcaagcttttggcctcctgcagcgcggacttatccatcaaattgtgggatttccag
cagagctacgagtgtatcaaaactatgcatggtcacgatcacaatgtctcgtcggtggcc
tttgtgccggccggagattatgtactctctgcatcccgggaccgcactattaaaatgtgg
gaggtggccacaggctactgtgtgaaaacctacacaggccatcgagagtgggtgcgaatg
gtgcgagtgcacatcgaaggcagcatctttgccacatgctcaaatgatcagacaatacgt
gtttggttgacgaattcaaaagactgcaaggttgaattacgcgatcatgagcatactgtg
gagtgcattgcctgggcgccggaagccgcagcctctgcgataaacgaggcagccggagca
gacaacaagaagggccatcaccagggcccgttcctggcctccggctctcgcgacaaaacc
attcgcatttgggacgtgagcgtcggcctgtgcctgcttaccctgagtggccatgacaat
tgggtgcgtggcctggcattccatcctggtggcaaatacttggtgtcggccagcgatgac
aagaccattcgggtgtgggacttgcgcaacaagcgatgcatgaagacgctatacgcgcat
cagcatttctgcacctccatagattttcacaaagcgcatccgtacgtaattagcggtagc
gtagatcaaacagtaaaggtctgggaatgtcgttaa

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