KEGG   Drosophila melanogaster (fruit fly): Dmel_CG8571
Entry
Dmel_CG8571       CDS       T00030                                 
Symbol
smid
Name
(RefSeq) smallminded, isoform C
  KO
K14571  ribosome biogenesis ATPase
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Dmel_CG8571 (smid)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dme03009]
    Dmel_CG8571 (smid)
Ribosome biogenesis [BR:dme03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    Dmel_CG8571 (smid)
SSDB
Motif
Pfam: AAA AAA_lid_3 Nucleolin_bd AAA_16 AAA_5 RuvB_N AAA_22 TIP49 nSTAND3 AAA_14 AAA_33 NPHP3_N AAA_28 RNA_helicase ABC_tran Rad17 Mg_chelatase AAA_18 AAA_17 NACHT TsaE IstB_IS21 AAA_2 ATPase Parvo_NS1 Sigma54_activ_2 NB-ARC AAA_7 Vps4_C AAA_11
Other DBs
NCBI-GeneID: 38824
NCBI-ProteinID: NP_001163371
FlyBase: FBgn0016983
UniProt: P91638
LinkDB
Position
3L:7381614..7385637
AA seq 943 aa
MKKAKPLLHDHLITIRVKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQ
AFSIISESYNLDKVSSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPRKPLAPKPISEPID
ISSGDENEDDSNTKTTNGDGVAAAAAPPPPTPAVQGSALKRLMEEVPEIAVAAKKAKPNT
IHVSSSEAIQKLHQVVGNRAKNLSEDAVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDL
EVQHPTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLA
RAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW
ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIP
SRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFR
ELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSE
GDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSS
SNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTW
DDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAG
INFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSG
TRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEIL
KATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLC
VRSQHFQEALQQLRPSVNEQDRKIYDKLRLKYAAPRVPTLNDK
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgaagaaagccaagccgctgctgcacgaccatctaataacgatccgagtaaagaagtat
ctggaggagcacatcggggaaacctacctggatgtgaaacagatgaccagggagttgatg
caaaagtatccggaatattcacgacgcaaattcggaccattcagacagctggtgcaccaa
gcattctcgatcatttcggaaagctataacttggacaaggtaagcagttccgaggaagat
tgtgttagcgaggactccgagccaccacccacgaatagtgtgatgaacaatatgatgaac
agcctgtatagtcaaccaagaaagccgctggcgcccaagccaatcagcgagcccatcgat
atatccagtggagacgagaacgaagatgactccaatacaaaaaccaccaacggagatggg
gtagctgctgctgctgctcctcctcctcctactccagcagtgcagggcagtgctttgaaa
cgcctgatggaggaagtgccggagatcgcagtggctgcaaagaaagctaaaccgaatact
attcacgttagcagttcggaggccattcaaaagctgcaccaagttgtgggcaacagagcg
aaaaatctttcagaggacgccgttccgcgttccaaagatcaccgtaatgtgcctggctta
tatcagcagttgcaccaaaaccaaagtcgcgatcgccttcggaagttcaaaagggatctg
gaggtgcagcacccaacggaaagtttccgggacattggtggcatggatagcactcttaag
gagttgtgtgaaatgctgatccatattaagtcgccggagttctactttcaattgggtcta
ttgccttcgagaggtttattgcttcatgggccgccaggctgtggcaaaacctttcttgct
cgtgccattagcgggcaactaaaaatgcctctaatggaaattccggccacagagctaatt
ggtggcatctctggtgagtcggaagaacggattcgcgaggtctttgaccaggccattggc
tactcgccttgtgtgcttttcatcgatgaaatcgacgccatcggaggaaatcgtcagtgg
gcgtccaaggatatggaacgtcgcattgtctcgcagctgataagcagtctggacaacctg
aaggccaacgagtttggccaatcagtagtcgtcatagcggccaccacgcgtcccgatgtc
ctcgaccctggactacgtcgcatcggtcgcttcgatcacgaaattgccatacacatccca
tcgcggaaagagcggcgtgaaatcttgcgcatccagtgcgagggcttgtccgtcgatccc
aagctaaattatgataagattgcagagctaacaccgggatatgtcggtgctgatctaatg
gctctcgtaagtcgtgcagcttctgtggccgtaaagcgtaggtccatgaagaagttccgt
gaactgcacgctgctagtgaaaagaatatgacaacggtcactttggatgacgacgagccc
agcgaggacgcaggtgaaacacctgtgcctgattcaaaaggtgaagaaactgcaaaagat
gcagaggcagaacaaaaggtagatggtgacaaggaaacatctgctaaggataaatcagaa
ggcgactcgccaaatattgaaacccccaagaaagcgaccaacggcaactcatcgataaag
tcgccgcagaaaacaccgaagaaatcagcggagaaaccaactgacgcagcgatggatgta
gacaatgttgctcccgaggagccgaaaaaagccgttgagcaggaggtggattcctcctcc
tccaacgacgagtactacgaacccacactggccgaactgaccaattttcttgacaacccc
cctgaagagttcgccgacccaaacttttgcctcactctcattgatttcgtagatgccatt
aaggtgatgcagccttcggccaagcgcgagggctttataacagtaccagataccacttgg
gatgacattggtgccctagagaaaattcgcgaagagcttaagttggctgtcttggcacca
gttaagtatccagagatgctggaacgtcttgggctgacagctccgtcaggcgttctgcta
tgcggtccgccgggttgcggcaaaactcttttggccaaggctattgccaatgaggctggc
atcaatttcatatcggtgaagggccccgaacttatgaacatgtatgtcggcgagagcgaa
cgagctgtgcgtgcctgtttccaacgtgcccggaactctgcaccctgcgtcatcttcttc
gacgagttcgactccttgtgccccaagcgatcggatggtggcgatggtaataattcgggc
actcgtatcgttaaccaactgctgaccgaaatggatggcgtcgaggagcgcaagggtgta
tacatattggcggccaccaacagaccggatatcattgatccggccatcctgcgaccgggt
cgcctggacaccattttgtacgtgggtttccccgagcagagcgaacgtaccgagattttg
aaggccaccacaaagaacggaaagcgtccggttctggccgatgatgtagatctcgatgaa
attgctgcccaaaccgagggctatactggcgcagatttggcaggattggtcaagcaggcc
tccatgttctccctgcgacaatctctaaacaacggcgacacaaatctcgacgatttgtgc
gtacgcagccagcatttccaggaagctttgcagcaacttcggccctcagttaacgaacag
gaccgcaaaatatacgataaactgcgcctgaaatatgctgcaccaagggtacccactcta
aatgataagtaa

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