Drosophila melanogaster (fruit fly): Dmel_CG8571
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Entry
Dmel_CG8571 CDS
T00030
Symbol
smid
Name
(RefSeq) smallminded, isoform C
KO
K14571
ribosome biogenesis ATPase
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dmel_CG8571 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dme03009
]
Dmel_CG8571 (smid)
Ribosome biogenesis [BR:
dme03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Dmel_CG8571 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_5
RuvB_N
AAA_22
TIP49
nSTAND3
AAA_14
AAA_33
NPHP3_N
AAA_28
RNA_helicase
ABC_tran
Rad17
Mg_chelatase
AAA_18
AAA_17
NACHT
TsaE
IstB_IS21
AAA_2
ATPase
Parvo_NS1
Sigma54_activ_2
NB-ARC
AAA_7
Vps4_C
AAA_11
Motif
Other DBs
NCBI-GeneID:
38824
NCBI-ProteinID:
NP_001163371
FlyBase:
FBgn0016983
UniProt:
P91638
LinkDB
All DBs
Position
3L:7381614..7385637
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AA seq
943 aa
AA seq
DB search
MKKAKPLLHDHLITIRVKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQ
AFSIISESYNLDKVSSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPRKPLAPKPISEPID
ISSGDENEDDSNTKTTNGDGVAAAAAPPPPTPAVQGSALKRLMEEVPEIAVAAKKAKPNT
IHVSSSEAIQKLHQVVGNRAKNLSEDAVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDL
EVQHPTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLA
RAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW
ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIP
SRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFR
ELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSE
GDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSS
SNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTW
DDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAG
INFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSG
TRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEIL
KATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLC
VRSQHFQEALQQLRPSVNEQDRKIYDKLRLKYAAPRVPTLNDK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccaagccgctgctgcacgaccatctaataacgatccgagtaaagaagtat
ctggaggagcacatcggggaaacctacctggatgtgaaacagatgaccagggagttgatg
caaaagtatccggaatattcacgacgcaaattcggaccattcagacagctggtgcaccaa
gcattctcgatcatttcggaaagctataacttggacaaggtaagcagttccgaggaagat
tgtgttagcgaggactccgagccaccacccacgaatagtgtgatgaacaatatgatgaac
agcctgtatagtcaaccaagaaagccgctggcgcccaagccaatcagcgagcccatcgat
atatccagtggagacgagaacgaagatgactccaatacaaaaaccaccaacggagatggg
gtagctgctgctgctgctcctcctcctcctactccagcagtgcagggcagtgctttgaaa
cgcctgatggaggaagtgccggagatcgcagtggctgcaaagaaagctaaaccgaatact
attcacgttagcagttcggaggccattcaaaagctgcaccaagttgtgggcaacagagcg
aaaaatctttcagaggacgccgttccgcgttccaaagatcaccgtaatgtgcctggctta
tatcagcagttgcaccaaaaccaaagtcgcgatcgccttcggaagttcaaaagggatctg
gaggtgcagcacccaacggaaagtttccgggacattggtggcatggatagcactcttaag
gagttgtgtgaaatgctgatccatattaagtcgccggagttctactttcaattgggtcta
ttgccttcgagaggtttattgcttcatgggccgccaggctgtggcaaaacctttcttgct
cgtgccattagcgggcaactaaaaatgcctctaatggaaattccggccacagagctaatt
ggtggcatctctggtgagtcggaagaacggattcgcgaggtctttgaccaggccattggc
tactcgccttgtgtgcttttcatcgatgaaatcgacgccatcggaggaaatcgtcagtgg
gcgtccaaggatatggaacgtcgcattgtctcgcagctgataagcagtctggacaacctg
aaggccaacgagtttggccaatcagtagtcgtcatagcggccaccacgcgtcccgatgtc
ctcgaccctggactacgtcgcatcggtcgcttcgatcacgaaattgccatacacatccca
tcgcggaaagagcggcgtgaaatcttgcgcatccagtgcgagggcttgtccgtcgatccc
aagctaaattatgataagattgcagagctaacaccgggatatgtcggtgctgatctaatg
gctctcgtaagtcgtgcagcttctgtggccgtaaagcgtaggtccatgaagaagttccgt
gaactgcacgctgctagtgaaaagaatatgacaacggtcactttggatgacgacgagccc
agcgaggacgcaggtgaaacacctgtgcctgattcaaaaggtgaagaaactgcaaaagat
gcagaggcagaacaaaaggtagatggtgacaaggaaacatctgctaaggataaatcagaa
ggcgactcgccaaatattgaaacccccaagaaagcgaccaacggcaactcatcgataaag
tcgccgcagaaaacaccgaagaaatcagcggagaaaccaactgacgcagcgatggatgta
gacaatgttgctcccgaggagccgaaaaaagccgttgagcaggaggtggattcctcctcc
tccaacgacgagtactacgaacccacactggccgaactgaccaattttcttgacaacccc
cctgaagagttcgccgacccaaacttttgcctcactctcattgatttcgtagatgccatt
aaggtgatgcagccttcggccaagcgcgagggctttataacagtaccagataccacttgg
gatgacattggtgccctagagaaaattcgcgaagagcttaagttggctgtcttggcacca
gttaagtatccagagatgctggaacgtcttgggctgacagctccgtcaggcgttctgcta
tgcggtccgccgggttgcggcaaaactcttttggccaaggctattgccaatgaggctggc
atcaatttcatatcggtgaagggccccgaacttatgaacatgtatgtcggcgagagcgaa
cgagctgtgcgtgcctgtttccaacgtgcccggaactctgcaccctgcgtcatcttcttc
gacgagttcgactccttgtgccccaagcgatcggatggtggcgatggtaataattcgggc
actcgtatcgttaaccaactgctgaccgaaatggatggcgtcgaggagcgcaagggtgta
tacatattggcggccaccaacagaccggatatcattgatccggccatcctgcgaccgggt
cgcctggacaccattttgtacgtgggtttccccgagcagagcgaacgtaccgagattttg
aaggccaccacaaagaacggaaagcgtccggttctggccgatgatgtagatctcgatgaa
attgctgcccaaaccgagggctatactggcgcagatttggcaggattggtcaagcaggcc
tccatgttctccctgcgacaatctctaaacaacggcgacacaaatctcgacgatttgtgc
gtacgcagccagcatttccaggaagctttgcagcaacttcggccctcagttaacgaacag
gaccgcaaaatatacgataaactgcgcctgaaatatgctgcaccaagggtacccactcta
aatgataagtaa
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integrated database retrieval system