KEGG   Drosophila melanogaster (fruit fly): Dmel_CG9323
Entry
Dmel_CG9323       CDS       T00030                                 
Symbol
Rhau
Name
(RefSeq) RHAU helicase, isoform B
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG9323 (Rhau)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG9323 (Rhau)
   03012 Translation factors [BR:dme03012]
    Dmel_CG9323 (Rhau)
Enzymes [BR:dme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Dmel_CG9323 (Rhau)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     Dmel_CG9323 (Rhau)
Translation factors [BR:dme03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    Dmel_CG9323 (Rhau)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C DEAD HA2_C HA2_N nSTAND3 AAA_22 AAA_19 NB-ARC ATPase ResIII ABC_tran TrwB_AAD_bind TsaE MavL Rad17 AAA_7 SRP54 AAA_16
Other DBs
NCBI-GeneID: 35339
NCBI-ProteinID: NP_001260639
FlyBase: FBgn0032883
UniProt: Q8SWT2
Structure
LinkDB
Position
2L
AA seq 942 aa
MQRDRDSSGSNARKGNRPPGLRGKDIGLYYRNLARQQKKDRGENAESKEPQIRLGCNVSA
PSGVLERVKELMEDYSRAPSRQNVDDKNVDAKFQQQFRHLLSVNFEEFVAETKERNADLD
WVNPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGC
GKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRL
ESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPH
RPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRR
PKRDPPERRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENE
PEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPA
GQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGR
AGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAP
NPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAA
AALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKN
FLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMA
HLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLD
STMVFPMALIIFGDGVEAGVTQNTPYLCVAKTYYFKCNRETADVVIQLRSNLEKLLLKKA
LYPAPIEENGYEKQLIKAIELLLSLDERLGEDYISSDEIDDI
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgcagcgcgatagggactcatccggctccaacgcccgcaagggcaaccgcccaccgggt
ctcaggggcaaggacatcggtttgtactatcgcaatcttgcccggcagcaaaagaaggac
agaggcgagaatgcggaatcaaaggagccgcaaatccgcttgggctgcaatgtcagtgct
cccagtggagtgcttgagcgtgtgaaggagttaatggaggactacagccgggcaccgtcc
agacaaaatgtggatgacaaaaatgtggatgccaaatttcagcaacagtttcgccatctt
ttgagtgtaaactttgaggaattcgttgcggagaccaaggaacggaacgcggacttagac
tgggtaaaccccaagctggacgagagactgcagctggaactggggcaacgccagttggag
gagaatgccaagaaacggctagaagcacggaaaaaactgcccaccatgaaatacgccgac
gatattatccaggctgtgcgggaaaaccaagtaatactcattgtaggaagcactggatgt
ggcaagaccactcaggtgcctcaaatcctcctcgacgacgccatttcccgcggatgtgcc
tcgtcgtgccgcatcatttgcactcagccacgaaggatttcagccatcgccattgccgag
tgggtgagttacgagcgctgcgagagcctgggcaattcggtaggctaccagattcgccta
gagagcaggaaggccagggagagagcctccatcacttactgcaccacaggcgttctactg
cagcagcttcaatcggacccactgatgcacaatctaagtgtcttaatcctggatgagatc
cacgaacgcagcgtggaaacagatctcctaatgggtcttctaaaggttatcctgccccac
agacccgatctaaaggtgatcctgatgagtgcaactgtacgggagcaggatttttgtgac
tactttaacaactgtcccatgttccgcatcgagggcgtgatgtttcccgtgaagatgctc
tacttggaggatgttctgtccaagacgaactacgagttccaaaagttccgcgatcgtcgt
cccaagcgggatccgcctgagcgcaggatgaagcacgaggctatgatagaaccgtatctg
cgacgcatcaggaactcgtacgatagtcgtgtgctcgacaagctgcgtttgccggagtcg
gagggctgcgaggatattgattttatagccgatttggtttactacatatgcgaaaacgaa
ccagagggtgccatattagtgttcctgcctggttatgataagatctcccaactgtacaat
attctggataaaccaaagacttcgaagggccaaaggtggcgggatcatatggccgtattt
ccattacattccctaatgcagtcaggggaacagcaggcagtgttcaggcgaccaccggcg
ggccagcgtaaggttataatctctacaattatcgccgaaacgtcggtgactattgacgac
gtggtttatgtgataaactctggccggacgaaagccaccaactatgacatcgaaacgaac
atacagtcgctggatgaggtttgggtgaccaaagcaaatacccagcagcggagaggcagg
gcaggtcgagtgcggccgggcatatgctataatctgttctcccgcgctagagaggatcgc
atggacgatattccgacgccggagatactacgctccaagctggaatccataattttaagc
ctcaagctactgcacatcgacgatccgtatcggttcctgcaaactcttattaatgccccc
aatcccgaggccataaagatgggagtggaactgctaaagcgcattgaggcgttggaccag
acgggcacccttactccactgggcatgcacttggcaaagctgcccattgatccgcagatg
ggaaaaatgatcctgatgtcggcgctcttctgttgcttggatcccatcacttcggcggcg
gctgccttgtcctttaagtcccccttctactcgcctttgggtaaagagagccgagtggat
gaaatcaagcggagaatggcccgaaatatgcggagcgatcacctgatggtgcacaatacc
attattgcgtaccgcgatagccgctattcgcacgcggaacgagacttctgctataagaat
ttcctcagctccatgacactgcagcagttggagaggatgaagaatcagttcagtgagctg
ctctacaactacaaatttctggcatcgtcaaactgcaaggatgctgcatccaataagaat
tctgagaagattcccctactgagggccattataggagcgggactctatcccaacatggct
cacttgcgaaaatcacggcagatcaagaatagagtacgcgctatccacaccatggcaacg
gacgatggacgccgcgttaactttcatccctcctcggtgaacagcggagagagtggcttc
gactcggcatactttgtctactttcagcggcagaagtccaccgatcttttcctgctcgac
tccacaatggtttttcccatggcactgatcattttcggagatggcgtggaagcgggagtg
acccaaaatacgccatatctgtgcgtggccaagacatattactttaaatgcaatcgtgaa
actgccgacgtagtcatacaattaagaagcaatttggagaaactgctgctcaaaaaggct
ttgtatccggccccgatcgaggagaacggatatgaaaagcagttgatcaaagccatcgaa
ttgcttctctcgctagacgaaagactcggcgaggactatatttcatccgatgaaatcgat
gacatataa

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