KEGG   Drosophila melanogaster (fruit fly): Dmel_CG9433
Entry
Dmel_CG9433       CDS       T00030                                 
Symbol
Xpd
Name
(RefSeq) xeroderma pigmentosum D
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03022  Basal transcription factors
dme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Dmel_CG9433 (Xpd)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dmel_CG9433 (Xpd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG9433 (Xpd)
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG9433 (Xpd)
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG9433 (Xpd)
Enzymes [BR:dme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Dmel_CG9433 (Xpd)
Transcription machinery [BR:dme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Dmel_CG9433 (Xpd)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Dmel_CG9433 (Xpd)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Dmel_CG9433 (Xpd)
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 DEAD ResIII nSTAND3 AAA_11 ALKL1_2
Other DBs
NCBI-GeneID: 37414
NCBI-ProteinID: NP_726036
FlyBase: FBgn0261850
UniProt: Q7KVP9
LinkDB
Position
2R:21171001..21174504
AA seq 769 aa
MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM
VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE
VSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDL
KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID
NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD
TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD
ISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP
FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS
FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT
SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA
RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW
LRRMAQPFTREDQLGISLLTLAQLENMEQEKLERQAQGKQGVGGEVQEL
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgaagctcagcgtggacggcctgttggtgtactttccgtacgagtacatctacccggaa
caatatgcctacatgctggaacttaagcgtagcctggacgccaagggccactgcctgttg
gagatgccctcgggaacgggcaagacggccacgctgctctccctgatcgttgcctacatg
gtggagcatccggaaacggtgcgcaagctcatctactgctcgcgtactgttccggagatc
gagaaagtgatcgccgagctgcagaacctgatggtttactacgagcgccactgccccaat
ccaccacccttcaccggtctggtgctcagctctaggaagaacatgtgcatccatccggag
gtcagtaaggagcgcgagggcaaggccgtggacggtaaatgttacggactcactgccagc
tacattcgcgaacggcacgagatggacaccgagacgcccatttgccagtactttgaggga
tttagcctggaaggcaaggagtccacattgccggtcggcgtctacagcatcgatgatctt
aaggaatacggtcggtcgcgcaactggtgtccctactttttggctcgctatgctattgcc
catgctcacattgtggtatacagttaccactatctattagatccgaaaattgcccaggtg
gtatctaaggaaatgagccgcgagtcctgtgtggtctttgatgaggcgcacaacatcgac
aacgtttgcatcgattcgatgagtgtgaagatcaacagacgcaccgtggagcgaagcacg
aatgctttgaaccatctaactaaactggttcaggacattcgcgaagaggacacaaatcgt
ctgaacgaggagtatcagcgcatggtgcagggtctgaaggatgccagtgtgcagcgcgac
acggacatgatcctggccaatccggtcctgccaaacgatgtcctaaccgaggtggtgccc
ggaaatattaggaacgccgatcatttccttagctttctgcgtcgattcatcgagtatata
aagacaagactgcgcgttcatcatgtcgttcaggagtcacctgcgggcttccttaaggat
atttcctccaagatttgtatagagagaaagcctctgcgtttttgtgctgagcgcctgtcc
agtctgctgcgcacgcttgagatcagtgatttgacggagtatggagcccttacactgatt
acacactttgccaccctggtgtccacctacacaaagggcttcacaatcattatagaaccc
ttcgacgataaaacgccgactgtttcgaatcccattttgcactttagttgcctagactct
tccattgccatggctccggtattttcgagatttcaaaccgtggtcatcacttctggcaca
ttgtcacccatggacatgtacccgaagatactcgatttcgatccagtggtgatgagcagc
tttaccatgacactagcccgtccgtgtcttcttcctatgattgtatcgaagggcaacgac
caggtgaccatttcgtccaagttcgagacgcgagaagacaccgccgtcattcgaaactat
ggccagcttttggtggaggtggcaaagacagtgcccgacggtattgtatgcttcttcacc
tcctatttgtacttggagtctgtggtggcctcttggtatgatcagggaatcgtcgatacc
ctgcttcgctacaagcttctattcattgagactcaggacaatgccgagaccagctacgcc
ctgatgaactatgttaaggcctgcgattgtggtcgtggagcagtgctgttggctgtggcg
cgtggcaaggtctccgagggtgtggatttcgaccatcattatggtcgcgcggtgctcatg
ttcggcatcccctacgtgtacacgcagtcgcgtattctgaaggcccggttggactacctg
cgggatcagtttcagatacgtgagaatgacttcctgaccttcgacgccatgcgtcatgct
gcccagtgcgtgggtcgtgcactgcgcggcaagacggactacggcatcatgatcttcgcg
gacaagcgcttttcgcgccacgacaagaggtcgcgtttgcccaagtggatccaagagcat
ctggtggacagcttctgcaacctgagcacggaggaggccgtccagctggcccgtcgttgg
ctgcggcgcatggcgcaaccgttcacacgtgaggaccagctgggcatctcgctgctgacc
ctcgcccagctggagaacatggagcaggagaagctggagcggcaggctcagggcaagcag
ggcgttggcggcgaggtgcaggagctgtga

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