KEGG   Drosophila melanogaster (fruit fly): Dmel_CG9615
Entry
Dmel_CG9615       CDS       T00030                                 
Symbol
tex
Name
(RefSeq) tex
  KO
K12880  THO complex subunit 3
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG9615 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG9615 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG9615 (tex)
   03041 Spliceosome [BR:dme03041]
    Dmel_CG9615 (tex)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Dmel_CG9615 (tex)
Spliceosome [BR:dme03041]
 Complex C
  Other components
   EJC/TREX
    Dmel_CG9615 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dmel_CG9615 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_EML RMC1_N DSE1_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st B-prop_COPA_B_2nd TRM82_WD Beta-prop_EIPR1 Beta-prop_ELP1_1st Beta-prop_TEP1_C Beta-prop_SPT8 WD40_RFWD3 Beta-prop_NUP159_NUP214 PD40 CFAP251_N Beta-prop_SCAP ASA1 PAC11 DPPIV_N Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_WDR41 Beta-prop_WDR11_1st WD_LRWD1
Other DBs
NCBI-GeneID: 40983
NCBI-ProteinID: NP_649784
FlyBase: FBgn0037569
UniProt: Q6A3Q4 Q9VHT2
LinkDB
Position
3R
AA seq 320 aa
MSRTEQTLEDLKSYLRSHSKIREQRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERD
RFLKGNTYRGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINI
AWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEPFSFEVNEISWNNTNDLFFLTNGLGCMH
ILSYPSLEHQMTLKAHPANCICIEFGPTGKYFATGSADAQVSLWDANELACLRMISRLEW
PVRTISFSHDERMIALASEDLIIDIAFTETGERVTDIHVDASTFTVAWHPKQYLLAYACD
EKDNDRRRDAGNVKIYGFSE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagtcgcacggagcagacattggaagacctgaagtcgtatttgcggagtcacagcaaa
atccgcgagcagcggtcgcacatgtctaaggttcactcggtctgctggaatgccgatggt
cgttacctggcctccggaagcttcgacaagacggtggtcgtctactcgctggagcgggac
cgcttcttgaagggcaacacataccggggacacactgcgtccgtggaccagctgtgttgg
catcgcaccaatcccgaccagtttgccaccgcaagcggagacaagaccgtgcgcatctgg
gacatacgagttggaaaatgcgtatcggtgacgaacaccaagggggagaatatcaacatt
gcctggtcgcccgatggcaaaacgatcgccgtgggcaacaaggaggatctgatcaccttt
atagacacacgcacgaacaagattcgcgtggaggagccgttcagcttcgaggtcaacgag
atatcgtggaacaacaccaacgacctgttcttcctaaccaacggactcggctgcatgcat
atcctcagctatcccagtctcgagcaccagatgaccctgaaggcccatcccgccaactgc
atttgcattgagttcggacccacgggtaaatactttgccactggctcggcggacgcacaa
gtctccttgtgggatgccaacgagctggcctgcctgcgcatgatcagccgcctggagtgg
cccgtccgcaccatatcgtttagccacgacgagcgaatgattgccttggccagcgaggac
ctcattatcgacattgccttcacggagacgggcgagcgggtaaccgacattcacgtggac
gcctccacgttcacggtggcctggcatccgaagcagtacctgctggcctacgcctgcgat
gagaaggacaacgatcggcgacgtgacgctggcaacgttaagatatatggcttttcggaa
taa

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