Drosophila melanogaster (fruit fly): Dmel_CG9998
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Entry
Dmel_CG9998 CDS
T00030
Symbol
U2af50
Name
(RefSeq) U2 small nuclear riboprotein auxiliary factor 50, isoform D
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmel_CG9998 (U2af50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dme03041
]
Dmel_CG9998 (U2af50)
Spliceosome [BR:
dme03041
]
Complex A
U2 snRNP components
U2 related factors
Dmel_CG9998 (U2af50)
Complex B
Dmel_CG9998 (U2af50)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
32602
NCBI-ProteinID:
NP_001245710
FlyBase:
FBgn0005411
UniProt:
Q24562
M9NDZ4
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Position
X:complement(16356696..16359039)
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AA seq
416 aa
AA seq
DB search
MGYDDRERDRERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLYWDVPPPGFEHITPMQYK
AMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLV
GLAQAAGSPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMP
GITDTPAIKPAVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVK
DAATGLSKGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSV
MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIP
RPIEGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgatgaccgtgaacgcgatcgcgagagacgccgacatcgttcccgctctcgg
gaccgccatcgcgaacgctccagggatcgacgccatcaccggaactcgaggcgcaagccg
tcgctttattgggatgtaccgccgccgggattcgagcacatcaccccgatgcaatacaaa
gccatgcaggcgtccggacaaatcccggcaagcgttgtgccggatacaccacaaacggca
gtgcccgtggtcggatcgacaattacccgacaggcgcgtcgcctgtacgttggcaacatt
ccgtttggcgtcaccgaggaggaaatgatggagttcttcaaccaacagatgcatttagtt
gggctcgcccaggcggccggcagtcccgtcttggcatgccaaattaacttggacaaaaac
tttgctttcctcgaattccgatcgattgatgaaaccacccaggccatggcattcgatggc
atcaatttgaaggggcagagcttaaagattaggcgtccgcacgattaccagcccatgccg
ggtataacagatacgccggcaattaagcccgctgttgtttccagtggagttatttcgaca
gtggttccggactcgcctcacaaaatcttcatcggaggtctaccaaactatctgaatgac
gatcaggttaaggaactgcttttgtcgtttggcaagctacgagccttcaacctggttaag
gatgccgctactgggttgagtaagggttatgctttctgtgaatatgtcgatcttagcatc
acagatcagtcgattgctggcctaaatggaatgcagctgggtgacaaaaaactgattgtc
caacgagccagtgtgggcgccaagaatgcccagaacgcggccaacaccacgcagtccgta
atgctccaagtgccgggcctgtccaatgtggtgacctctggaccgccgactgaggttctt
tgcttgctcaacatggtcacgcccgatgaactgcgggacgaggaggagtacgaggacatc
ttggaggacatcaaggaggagtgcacgaaatacggagtcgtgcggagcgtggaaattcca
cgtcccatcgagggcgtcgaagttcccggttgcggcaaggtctttgtcgaattcaactcg
gttctcgactgtcagaaggcgcagcaagcacttactggacgtaaattcagcgaccgcgtt
gtggtcacatcatatttcgatcccgacaaataccacagacgcgagttttag
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