Dipodomys merriami (Merriam's kangaroo rat): 138803324
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Entry
138803324 CDS
T11079
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138803324 (Ndc1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138803324 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138803324 (Ndc1)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138803324 (Ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
138803324
NCBI-ProteinID:
XP_069843284
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MAVPASGPSAGGSRDILWRVLGWRIVASIVWSVLLLPVCVTVFVIFNSLNLFHPIQWLSD
SINDLYSSYVIFYLLLLSVVMVIISIFNVEFYAVVPSIPCSRLALIGRIVHPQQLMHSFV
HAAMGMVTAWCAAVINKGQYSFLVVPCTGTTSLDSPPVQTCLNEYHLFFLLAGAFMGYSY
SLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLLKHSCVESLFLVRNFCLVYYFLGYIPKA
WISTAMNLHIDEHFHRPLDTVSGLLNLSLLYHVWLCGVFLLMTWYISWILFKIYATEAHV
FPVQPPFAGDSDECLPKVLSSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNDMTQKLVLYQEAAATNGRLSSSYPVEPKKLNSSEETALQTPKPSQI
PRSSLPPSAKTALFSSKLSTPDTSSTFGSPFGSNVVNRMAGIFDANICYTSSQSPLLIRR
GPRLWTSASDEQMSGFSNLPPCTSISANGKTVRQPNVIYSWIQNKREQIKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNALLTLQE
AVDKYFKLPHASSKPPRISGSLVDRSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccggcgagtgggcccagcgccggcgggtcgcgggacatcctgtggcgcgtt
ttgggctggaggatagtagcaagtattgtttggtcagtgttgcttctgcccgtctgtgtc
acagtctttgtcatcttcaacagccttaatctatttcatcctatacaatggctatcagat
tctattaatgatttgtatagttcgtatgtgatcttttatctcctgctgctgtcggtggta
atggtaataataagtattttcaatgtggaattctatgcagttgtgccttctattccctgc
tccagactggccctgataggaaggatcgttcatcctcagcaactcatgcactcatttgtg
catgctgccatggggatggtgacagcttggtgtgcagcagtaatcaacaagggccagtac
agttttcttgtggttccctgcactggtactacaagcctagacagccctcctgtgcagacc
tgcttaaatgaatatcatctgtttttcttactggctggagcattcatgggctatagctat
agcctcctgtactttgttaacaacatgaactatcttccatttcccatcattcagcaatac
aagttcttgcggtttaggagatctctgctcctactacttaaacatagttgtgtggaatca
ttgttcctggttagaaatttttgccttgtgtattattttcttggctatatacccaaagct
tggattagcactgctatgaaccttcacatagatgagcactttcacaggcctcttgacaca
gtaagtggcctcttgaacctctcattactctaccatgtctggctttgtggtgtcttcctc
ctgatgacttggtacatctcatggatactcttcaaaatctatgccacagaggctcatgtg
ttccctgttcagccgccatttgcaggagactcagatgaatgcctcccgaaagttttaagt
agcaatcctcccctcatcataaagtatttagctttgcaggacctgatgttgctttctcag
tattctccctctcgaagacaagaagtttttagccttagccaaccaggtggacatccccac
aattggactgccatttccagagaatgtttgaatcttttaaatgatatgactcagaaactg
gttctgtaccaagaagctgctgctaccaatgggaggctatcttcatcatacccagtagaa
cctaagaaactaaattcctcagaagaaactgctcttcagacgccaaaacctagccagata
cctcgatcatcactaccaccatcagctaaaactgcactattttcttcaaaattatctaca
cctgatacttcaagtacctttgggtctccttttggctctaatgtggtgaatcgaatggct
gggattttcgatgcaaacatttgttatacgtcatcacaaagtcctctgctaataagaaga
gggccaagattatggacttctgcttctgatgagcaaatgtctggattttctaatctacct
ccatgcacctctattagtgctaatggtaagacagtgagacaacccaatgtgatctattca
tggatacagaataagcgtgaacagattaagaatttcttgtccaaacgggtgctgataatg
tattttttcagtaagcatccagaggcctccattcaagctgttttttcagatgcccaaatg
catatttgggcattagaaggtctatctcacttagtagcagcatcattcacagaagataga
tttggagttgtccagactacactaccagctatccttaatgctttattgacactgcaagag
gcagtggacaagtacttcaagcttcctcatgcttccagtaaaccaccccggatttctgga
agccttgtggacaggtcttataaaacattaagatttgcatttagagcatcactgaaaact
gctatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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