Dipodomys merriami (Merriam's kangaroo rat): 138803752
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Entry
138803752 CDS
T11079
Name
(RefSeq) mitochondrial inner membrane m-AAA protease component AFG3L1-like
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
138803752
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmer01002
]
138803752
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dmer03110
]
138803752
Peptidases and inhibitors [BR:
dmer01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
138803752
Chaperones and folding catalysts [BR:
dmer03110
]
Other chaperones and cochaperones
AAA proteases
138803752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
AAA_16
TIP49
AAA_2
RuvB_N
nSTAND3
AAA_17
Mg_chelatase
AAA_14
Peptidase_M50B
AAA_28
AAA_33
IstB_IS21
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
138803752
NCBI-ProteinID:
XP_069843907
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSHRLVAAAGSRAVARPLAVLWRCGGSAGSSGTAETRTRAQGTARQCLRDIHFQYLPLQG
RLTSLSQWFFSKPPRGFEKFFKRRGRKTDSENSTAPKKETGESKNADPGTDGSKRGSKQD
DFTWWKRIQKGELPWDDKDFRNLALLGAGVAAGLFYFYFQEHGKEITWKHFVQYYLSRGL
VDRLEVVNKQFVRVIPAPGTTSEKFVWFNIGSVDTFERNLESAQWELGIEPTNQVTVVYT
TESDGSFLRSLVPSLLLVGILLYAVRRGPMRAGRGGRGVGLFSVGETTAKILKNSVNVRF
ADVAGCEEAKLEVMEFVNFLKNPKQYQDLGARIPKGAMLTGPPGTGKTLLAKAAAGEASV
PFITVNGSEFLEMFVGVGPARVRDMFAMARKNAPCILFIDEIDAIGRKRGRGHLGGQSEQ
ENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIF
KVHLRPLKLDETLSKNVLARKLAALTPGFTGADISNVCNEAALIAARHLSSSVQEQHFEQ
AIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWLLEHADPLLKVSIIPRGKGLGYAQ
YLPREQYLYTREQLLDRMCMMLGGRVAEQLFFGRITTGAQDDLRKVTQSAYAQIVQFGMS
EKLGQVSFDFPRQGEALVEKPYSEATAQLIDEEVRRLISSAYDRTLELLTQCREQVEKVG
RRLLEKEVLEKADMVELLGPRPFAEKSTYEEFVEGTGSLEEDTSLPEGLKDWNREREGDG
TEQHLQESPV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccgcctggtggcggccgccggcagtcgggcagtggctagaccgctcgccgtg
ctgtggcgatgcggcggcagcgccggaagcagtgggacggccgagacccgcacaagggcg
caaggcaccgcccggcagtgtcttcgggatatccactttcagtatttgcctctacaggga
agactgacttcattgtcccagtggttcttttcaaaaccacccagagggtttgagaaattt
tttaagaggcgtggaagaaaaacggattcagaaaattcaacagctccaaagaaagaaact
ggtgaatcaaagaatgctgaccctggaacagatggaagcaagagaggaagtaagcaggat
gactttacctggtggaaacggatacagaagggagaattaccctgggatgacaaagatttc
cgaaatctggcccttttgggggcaggtgttgctgcgggacttttctacttctactttcaa
gagcacggaaaagagatcacctggaaacactttgtacaatattacctgtccagaggtctg
gtggaccggctagaagttgtgaacaagcaatttgtgcgtgttattcctgctcctgggaca
acctctgagaagttcgtatggtttaacatcggcagtgttgacacctttgaacgtaacctg
gagtctgctcagtgggagctgggaattgagcccaccaatcaggtcacagtggtctatact
actgaaagtgatgggtctttcctgcgaagcctggtacccagcctactactggttggcatc
ctcctgtatgctgtgaggaggggcccgatgcgggctgggcgtggtgggcgaggagtgggc
ctcttcagtgttggtgagacaacagccaagatcttaaagaacagcgtgaatgtgcgattt
gcagatgtcgctggctgcgaagaggccaagttggaggttatggagtttgtgaatttctta
aagaaccctaagcagtatcaggacttgggggccagaattccaaagggagccatgcttact
ggcccgcctggtactggcaaaacgcttcttgcgaaagccgctgcaggagaggccagtgtg
cccttcatcactgtgaatgggtcagagttcctggaaatgtttgttggagtcggtccagca
agggttcgtgacatgtttgcaatggctcgaaaaaatgcaccttgtatcttgttcattgat
gagattgatgctattggacggaagcgaggccgagggcacctgggaggccagagtgagcag
gagaacacactgaaccagatgcttgtggagatggatgggtttaattccaccaccaatgtg
gtggtgctggctggcaccaaccgccctgatatccttgacccagctttgacacggcccggc
cggtttgatcgccagatatatattggtccccctgacatcaaaggtaggtcctctatcttc
aaggtccaccttcgtccactcaagctggatgagacccttagtaagaatgtcctagcgagg
aagctggcagctctcactccaggcttcactggtgctgatatttctaatgtatgcaatgaa
gcagctctgattgcagctcgccacctgagctcttctgtccaggagcagcactttgagcaa
gccattgaaagggtcattggaggtttggagaagaagacccaggtcctacagcccagtgag
aagacaactgtggcctatcatgaggccggccacgcagtggtgggctggctcttggagcat
gcagatcccctgctgaaggtgtccatcatcccccggggcaagggacttggctatgcccag
taccttccccgggagcagtacctctacacaagagagcagctcttggaccgcatgtgcatg
atgctggggggcagggtggctgagcagctcttctttgggcggatcaccacaggggctcag
gatgacctgaggaaggtcactcaaagtgcctatgctcagattgtgcagtttggaatgagt
gaaaagctgggccaggtgtcctttgactttcccagacaaggtgaggctctggtggagaag
ccgtacagtgaggcaactgcccagctcatcgatgaggaggttcggcgcctcatcagctct
gcctatgatcggaccctggaattgcttacccagtgccgggagcaagtggagaaagtgggc
aggcggctcctggagaaagaagttctggagaaggccgacatggtggagttactgggccct
cggccctttgcagagaagtccacttatgaggagtttgtggagggcactggcagtcttgag
gaagacacatctcttcctgagggcctgaaggactggaaccgggaacgggagggggacggc
actgagcagcacctgcaggagagcccggtgtag
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