Dipodomys merriami (Merriam's kangaroo rat): 138804449
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Entry
138804449 CDS
T11079
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmer03016
]
138804449
Enzymes [BR:
dmer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
138804449
Transfer RNA biogenesis [BR:
dmer03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138804449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
138804449
NCBI-ProteinID:
XP_069844810
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MMASPCAAGFPAEGRCGYYVEKKKRFCRMVAAAGKRFCGEHAGAAEEENSRKRILCPLDP
KHTVYEDQLAKHLKKCNAREKPKPDFFIQDINAGLKDDTEIPEQLVPISSLSEEQLGNLI
NKLRKASEGLSSTLNDHIMSHPALHDAINDPRNGDSATKHLKQQASILGNIEKLQLLGPR
RCFVEFGAGKGKLSHWVDVALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQIDIQ
HLCLNKIPVLREGKLPVVGIGKHLCGVATDLALRCLVETYAACYEKRNEEPLAKRIKNDK
TENEINTLAKEGSENNVPEKWTPVAGIVIALCCHHRCEWRHYVGKEYFRGLGLGAVEFHY
FQRMSSWATCGMRKAPLEDTAITTKSKDHQSDDSEEHDDGEYRITDDSTDNLPGILTVEE
KKKIGHLCKLLIDQGRVQYLQHKGFSPALQNYIDPLVSLENVLLTALPIPSSSLQTTG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgagtccgtgcgctgctgggtttccagccgaggggagatgcgggtactacgtg
gaaaagaagaagcggttctgcaggatggtggcggccgcggggaagaggttctgcggcgag
cacgccggcgccgcggaggaagaaaattctcgaaaaagaatcctgtgtcctttagatcca
aaacacacagtatatgaagatcaactagcaaagcatttgaaaaaatgtaatgcaagagag
aagccaaaacctgatttctttattcaagatattaatgcaggcttaaaagatgatacagaa
atacctgaacaattagttcccatttcttctctatcagaagagcagttgggaaacttaatt
aacaaattgagaaaagcaagtgaaggtttgagttccacacttaatgatcacatcatgtct
cacccagcattacatgatgccattaatgaccctagaaatggggattctgcaaccaagcac
ttgaaacaacaggcttctattttaggtaacattgaaaaattacagttacttggtccaaga
agatgctttgttgagtttggagcaggcaagggaaaattatctcattgggttgatgttgcc
ttaaaagatgctgaaaaagttcacttcatcctcgtagaaaaagtaactacaagattcaag
gtggatggtaaacacagaaagaaaaattcagtgttcgaaagacttcaaattgatattcag
cacttatgtttgaacaagattcctgtgctaagagaaggaaaactacctgtggtaggaatt
ggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttggttgaaacctat
gctgcctgttatgagaaaaggaatgaagaacctttagccaaacgcataaagaatgataaa
acagaaaatgaaattaacactttggccaaggaaggaagtgaaaataatgtcccagagaag
tggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgtgaatggaga
cattatgtgggcaaagaatatttcaggggtctaggccttggagcagtggaattccactat
ttccagcgaatgagtagttgggcgacttgtgggatgcggaaagcgcctttggaagacaca
gctattactacaaagagcaaagatcatcaaagtgatgacagtgaagagcatgatgatgga
gaatataggatcacagatgacagcactgataatttgccggggattctcactgttgaagaa
aagaagaagatagggcatctttgtaaactgctgattgaccaaggccgagttcagtattta
cagcacaagggattcagtcctgctttacagaactatatagaccctttggtgtctctggaa
aatgtattgttaacggccttaccaattccttcttcttcactacaaacaactggttaa
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