Dipodomys merriami (Merriam's kangaroo rat): 138804706
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Entry
138804706 CDS
T11079
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138804706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138804706
Enzymes [BR:
dmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138804706
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138804706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
138804706
NCBI-ProteinID:
XP_069845253
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MLVSKNLPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDGLGNPSGNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPSATEIQEELEEYTTQILQNNLLGSQGAH
VKNVCESRSKLIAYFWKTHMTAKRCPHCKTGRSLVRKEHNSKLTVMYPAVVHKKSDQKDT
EDPASGIEEAQMGKRGYLTPSSAEEHLFAIWKNEGFFLNYLFSGLAVGTEARFNPSMFFL
DFVVVPPSRYRPVNRLGDQMFTNGQTVNLQAVIKDVVLIRKLLALMAQEQKLPCEVVALT
TDKEKDSSIAMDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQ
ILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQE
LRQAVINGPNVHPGASMVINEDGSRTALSSVDITQREAVAKQLLTPATGAPKPQGTKIVC
RHIKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYR
GLTDKVGRVKLLPPAILKPFSLWTGKQVVSTLLINIIPDDYIPLNLTGKAKISGKAWVKE
TPRPVPDFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGQTSGKVLT
CLARLFTAYLQLYRGFTLDVEDILVKPKADVKRQQIIEESTHCGPRAVRVALNLPEAASC
DEVRGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGI
RPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLY
GEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWHSKH
STAQLRKGAFLNYSQKMQAAVKALNLEGKNQNGRSPETQQMLQMWYELDEQSRWKYQKKA
ASCPDPSLSVWRPDIYFASVSETFEKKMDDYSQEWAAQAEKNYMKSELSLDRLRTLLQLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLQKVDVQESFCMGEKQNKFRVYELRF
EFLPHAYYQQEKCLRPEDILHFMETRFFKLLMECIRKKSSKESTFRSVNTRRATQKDLDN
AEESGRARGEQEGDEEEEGNIVDAEADEGDTDASDTKRKEKQEEEVDYESEEEEEKEEEE
EEEETTEEGNIHGEGGALQAHGSDEEVGSGLEEDLPQKPPRHHRGPQGAEAVQRRVQAVR
EAHSFIEDYQYDTKEGLWCQVTMKLPLMKINFDMSSLVVSLAHSAIVYTTKGITRCLLNE
TTNSENEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRVIEKEIK
DVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSSSSPLQQMTFETSFQFLKQATM
MGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgttggtctccaagaacctgccttggcggcggctgcaaggcatttccttcggcatgtat
tcggctgaggagctcaagaaattaagtgttaaatccattacgaaccctcgttatgtggac
ggtctaggaaacccatccggaaatggtctctatgatttagccttgggacctgcagattcc
aaggaagtatgctccacctgtgtgcaggacttcagcaactgctctgggcacctgggccac
attgagcttccactgacagtgtataaccctctcctctttgataaactctacctgttgctc
cgaggctcctgtttaaattgccacatgctgacttgtccccgggctgtaattcacctgttg
gtctgccagctaagggttctggaagttggggccctacaagcagtctatgagcttgaacga
attctgaacaggtttctggaagaaaatgctgatccttctgccactgaaattcaggaagag
ttagaagaatacacaacccaaattctgcagaacaacctcttggggtcccaaggtgcacat
gtaaaaaatgtgtgtgagagcaggagcaaactcattgcttacttctggaagacacatatg
actgctaagcgatgtccccactgcaagactgggcggtcacttgtccgaaaggagcacaac
agtaagctgacagtcatgtaccctgctgtggtgcacaagaaatctgaccagaaggacaca
gaggatccagcttcaggaattgaggaagctcagatggggaaacgagggtatttaacacct
agcagtgccgaagaacatctttttgccatttggaagaatgaaggattctttttgaattac
ctcttttctggacttgctgtgggcacagaagcgagattcaatcccagtatgttttttctt
gattttgtggtggtgccgccctccaggtatcgtcctgtcaatcgcctgggggaccaaatg
tttaccaatggccagactgtgaacctacaagctgtcataaaagatgtagttctaatccgg
aaacttctggcattgatggcccaagaacagaagctgccctgtgaggtggtagcactcacc
acagacaaggaaaaggactcttcaattgctatggaccgatcctttttaagtatgcttcca
ggccagtctctcacagacaaactttataacatttggattcgacttcagagccatgtcaat
atcgtgtttgatagcgagatggataaattaatgatggaaaagtaccctggcattagacag
atcctggagaagaaggaaggacttttccgaaagcatatgatgggaaagcgagtagattat
gcagcacgctcagtcatctgcccagatatgtacatcaacaccaatgaaattggcattccc
atggtgtttgccacaaaattgacctaccctcagccagttaccccctggaatgtgcaggaa
ttgaggcaagcagtcattaatggccccaatgtgcatccaggagcctccatggtcatcaac
gaggatggcagtcgcacagctctaagctcagtggacataacccagcgggaagctgtggct
aaacagcttctgacaccagccacgggggccccgaagccccaagggacaaaaattgtttgc
cggcatataaagaatggagacattcttctactgaaccgacagcccaccctgcacagacca
tccatccaggcccaccatgctcgtatcctacctgaagagaaagtccttcggctccactat
gccaactgcaaggcctataatgctgactttgatggagatgagatgaatgcccacttccct
cagagtgagctgggtcgggcagaggcctatgtcctggcctgtactgatcaacagtacctt
gttcccaaggatggccagccattggcaggactgatccaagatcacatggtttcaggtgca
aacatgactattcggggttgctttttcacccgagaacagtatatggagctggtataccga
ggactcacagacaaagtaggacgcgtgaagctccttcctcctgccattctgaagcccttt
tcactgtggactggaaagcaggttgtatcaacactgctcataaacataatcccagacgac
tacattccactgaatttaactggaaaggctaaaatcagtgggaaagcctgggtgaaagaa
actcctcggcctgttcctgactttaaccctgactccatgtgtgagtctcaggtgatcatc
agggaaggggagctgctctgtggagtgctggacaaggcgcactatgggagctctgcctac
ggcctagtccactgctgctatgagatctatgggggtcagaccagtggcaaggttcttacc
tgcttggctcgtctcttcactgcctaccttcagctctacagaggatttaccttggatgtg
gaagacattttggttaagccaaaggcagatgttaagagacagcagatcattgaagaatcc
actcactgcggacctcgggctgtcagggttgcgttgaacctaccagaagctgcatcatgt
gatgaggtccgtgggaaatggcaggatgcacatcttggcaaagaccagcgggattttaac
atgattgatatgaagttcaaggaggaagtaaaccattacagcaatgagattaacaaggca
tgcatgccttttggcctgcacagacagtttccggagaacaacctacagatgatggtgcag
tctggagccaaaggttcaactgtgaacacgatgcagatctcttgcctgctgggtcagatt
gagttggaaggtcggagacctccactgatggcgtctggcaaatcattgccctgctttgaa
ccttatgaattcacccccagggctggtggctttgtcactggaaggtttctcacaggtatt
agacctccggagttcttctttcactgcatggcagggcgagagggcctggtagatactgct
gtgaaaaccagccgttctggctatctccaaaggtgtatcatcaagcacttggaaggcctt
gttgtccagtatgatctgacagtccgtgacagcgatggcagcgtggtgcagttcctatat
ggggaagatggcctggatatccccaagacgcagttcttgcagcccaagcagtttcccttc
ctggccagcaactatgaggtgataatgaaatcaaagcatctccatgaagttttgtccaga
gcagatcctcagaaagctctccgtcacttcagagccattaaaaaatggcacagcaagcat
tctactgcccagctaaggaaaggtgccttcctgaattactcccaaaagatgcaggcagct
gtgaaagccttgaacctcgagggcaagaaccagaatggccgcagcccagaaactcaacag
atgttacagatgtggtatgagttggatgaacagagcaggtggaaataccagaagaaagca
gcctcttgtcctgaccccagtctgtctgtgtggcgcccggacatctactttgcatctgtc
tcagaaacatttgaaaaaaagatggatgactacagtcaagaatgggcagctcaagcagag
aagaattacatgaaatcagagctttctctcgacaggctgagaaccttgctgcagctaaaa
tggcagcgctcgctgtgcgacccaggcgaggctgtgggactgctggctgcccagagcatt
ggggagccctccacacagatgactctgaacaccttccacttcgcaggcagaggcgagatg
aacgtcaccctgggtattccaaggttaagggagattctcatggtggctagtgccaacatc
aagacacccatgatgagtgtccccgtcttcaacaccaagaaagccctgaagagagtgaag
agcctgaagaagcagctcaccagggtgtgcctaggggaggtgttgcagaaagttgatgtc
caggagtccttctgcatgggggaaaaacagaacaaattccgggtgtatgagctgaggttt
gagttcctgccgcatgcctattaccaacaggagaagtgcctgagacctgaggacatcctg
catttcatggaaacaagattctttaaactcctgatggagtgcatcagaaagaagagtagt
aaagaatcgaccttcagaagtgtgaatacacgaagagctacacagaaggatcttgataat
gctgaggagtcagggagggctcggggagaacaggaaggtgatgaagaagaagaggggaac
attgtggatgctgaggctgatgagggggatactgatgcctctgacactaaacgcaaggag
aagcaagaggaagaggtggattatgagagcgaggaagaggaagagaaggaagaggaggag
gaggaggaggaaacaacagaagaagggaacatccatggtgaaggtggtgcccttcaggcc
catggttcagatgaggaagtgggctcaggcctggaagaagacttgccccagaaacctccc
cgccaccaccggggaccccagggagctgaggctgtgcagcgccgggtccaggctgtgcgt
gaggcccattcattcattgaagactaccagtatgacaccaaagaaggactgtggtgccag
gtgacgatgaagctccctctgatgaagattaactttgacatgagctccctggtggtgtcc
ttggcccacagtgccattgtttacacaaccaagggcatcactaggtgcctcctgaatgaa
acaaccaacagtgagaatgagaaggaacttgtgctgaacacagaaggaatcaacctccca
gagctgttcaaatatgctgaggtgctggacctgcgccgcctctactccaatgacatccat
gccatggctaacacttacggcatcgaggcagcactgcgggttatcgagaaggagatcaag
gatgtgtttgccgtgtatggcattgcagtcgatcctcgccatctctccttggttgctgat
tatatgtgttttgagggtgtttacaagccactgaatcgcttcgggatccggtccagctcc
tcccctctgcagcagatgacgtttgaaaccagcttccagtttctgaagcaggccaccatg
atgggatcccacgatgaactgaggtccccttcagcctgccttgtggtggggaaagttgtc
aaggggggaacaggcctgtttgaactcaagcagcccctgagatag
DBGET
integrated database retrieval system
