Dipodomys merriami (Merriam's kangaroo rat): 138804773
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Entry
138804773 CDS
T11079
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138804773
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138804773
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138804773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
138804773
NCBI-ProteinID:
XP_069845303
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MNAEALPEWITCLVQRAQWTVGKLNCPFCGARLGGFNFVSAPKCSCGQLAAVHLSKSRTD
YQPAQADGLMRPSLKSMSHPRVQSGCDKKTLPTGGSSKTRNHKLLNMAQNNNGLGRLTEA
LCLEVRATYFEMKNEKLLFKTSDPKYQRFVPQLVTGRCTRAFHRKSHSLDLNISEKRTLL
PTLYQIHSKITAYPRLNETQPIDLSGLPLQSSKNSCSFQNPSRFDPNMLLQRFSVASRET
QTQRGEFQCGLEASSVYSDHTTNTSNLTFVMDLPSTGRSMLEASEQEEQLSPLDFLHSAS
FSLGTINQRLNKRERSKLRSLRRKQRRHERWLQKQTLNNEMSTDDDNEYAEEKDGYICAV
CLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPANTPCPLCRTIISRVFFQTELNNATKTFF
TKEYLKIKQSFQKSSSAKWPLPSCKKRFHLFGGFHRRAAPVTRRQFPHGAHRMDYLHFED
DSRGWWFDMDMVIIYIYSVNWVIGFIVFCFLCYFFFPF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagaggcccttccagaatggataacctgcctggtacaaagagcccagtggaca
gttggaaaactgaattgccctttttgtggggctcgcttagggggctttaattttgtcagc
gctccaaaatgttcctgtggccagcttgcagctgtccatctctctaagagccggactgat
tatcaaccagcacaggcagacggactaatgagaccatcgctgaaatccatgtcacatccc
agagttcagtcaggttgtgacaagaaaactctgccaacaggtggtagctccaaaaccaga
aaccataagcttttaaatatggcccaaaataataatggtcttggaagattaacagaagca
ctctgcctagaggtacgggccacatactttgagatgaagaatgaaaaactgctcttcaaa
acgtcagatcccaaataccagcgttttgttccccagctggtgactggcagatgcacaaga
gcgtttcataggaaatcacatagtttagatttgaacatcagtgagaaacggactttatta
cccactttgtaccaaatacatagtaagattacagcttaccccaggctaaatgaaacacag
cccatcgacctttcaggactgcctttacagtctagtaaaaatagctgttcttttcagaat
ccatcccgttttgatcctaatatgctgcttcaaaggttttcagtggcttcccgtgagacc
cagacacaaagaggagaatttcagtgtggactagaagcttcttcagtgtactctgaccac
actactaataccagcaacctgacttttgtgatggatctgccctccactgggaggagcatg
ctggaggcctcagagcaagaagaacagctgtctcctctggactttctgcattccgccagt
ttttcactaggcaccattaaccaaaggctgaataaaagagaaagaagcaagttgaggagt
ctgagaaggaagcaacggaggcatgaaagatggctacagaagcagaccttgaataatgag
atgagtacagatgatgacaatgaatatgcagaagaaaaggatggctacatctgtgccgtg
tgcctggatgtttacttcaacccttacatgtgttacccttgccaccacatcttctgtgag
ccctgcctacggactctggccaaagacaatcctgcaaatactccctgcccactgtgtcgg
acaattatttctagagtctttttccagacagaactgaacaatgccacgaaaacattcttt
actaaggagtatttgaaaataaaacaaagctttcagaaatccagctctgcaaaatggccc
ctaccaagctgcaaaaaaagattccatctttttgggggtttccatagacgtgcagctcca
gttacacgaaggcagttcccacatggtgcacacaggatggactatctgcacttcgaggac
gatagccgtggatggtggtttgacatggatatggtgatcatctatatttactcagtgaat
tgggtcattggattcattgttttctgctttctttgctattttttctttccgttttag
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