Dipodomys merriami (Merriam's kangaroo rat): 138805028
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Entry
138805028 CDS
T11079
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dmer04990
]
138805028
Domain-containing proteins not elsewhere classified [BR:
dmer04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
138805028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
138805028
NCBI-ProteinID:
XP_069845697
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MKPILKDFSNLLLVVLCDYVLGEAEYILLREPGHVALSNNTVSVDFQYFDGANSTLRNVS
VLLLEANTNQTLTTKYLLTNQSQGTLEFECFYFKEAGDYWFMMTPESSANSTPVPWWEKS
AFLKAEWPVFHIELNRTSKSAEGTFQVGLFTNQPLCSFPVDKPDILVDVIFTNSLPQART
NPGQPLEIRTSKRTELTQGQWIEFGCAPVGPEAYVTVMLRLFGRDSVIASIGPIDLAQKF
GYKLVMVPELTCGSQVEVMVVPPPCIFAQGLVTVFKEAPRRPGERTIQLAENSLPLGERR
TVFNCTLFDMGKNKYCFHFGVSRRSRFSAKEKECMLIQRNIETWGMWQPWSQCSATCGDG
VRERRRVCLTSFPSSRPGCPGKSSEISPCSLEECAALRPSNPSSLPPKDPVKSNNIVTVT
GISLCLFIIIATVLITLWRRFGRPPKCSTPARHNSIHSPGFRKNSDEENICELSEQRGSF
SDGGDGPGGSPGDLGIPLTYRRSGQGSPEDDASGSESFQSNAQKIIPPLFSYRLAQQQLK
EMKKKGLTETTKVYHVSQSPLTDTAIDAATSPPLDLESPEEAANKFRIKSPFLDQPGVGA
GERPPSRLDFSVSPASCAISPSQTLIRKSQMRHTGGRGGSSERSHPRNSHFRRTASFHET
KQARPFRERSMSTLTPRQVPGYSSRTRTWDQAEDRGRPSGRGTHLLSEKGEHFQGAGGTS
GLLHPTSKSYTVGQPMRKPDSGDRQAGLVTGIERTDPHRARRGPSPSHRSVSRKQSSPSS
PQDIYQRVSPLSPSQFRKDKCQSFPAQPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEED
ETTSTLSVEKLVI
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatcttgaaggacttttcaaatctgttattggtcgtgctctgtgactatgtc
cttggagaagctgaatatatcctcttgagagaacctggccatgtagcgctaagtaacaac
acagtatccgtggatttccagtattttgatggtgctaatagcacactgaggaatgtgtct
gtcctgctgttggaggccaacaccaaccagactctaacaaccaaatacctcctaaccaac
cagtctcagggaacactcgaatttgaatgcttctactttaaggaagctggtgactactgg
ttcatgatgactccagaatcatcagccaacagcactccagtgccctggtgggagaaaagt
gcctttctaaaggcagaatggcctgtctttcatatagagttgaacaggacatccaaatca
gcagaaggcaccttccaagtgggtctatttaccaatcaacctctgtgctcatttcctgtg
gacaagcctgatatattagtggatgtcatctttaccaacagccttcctcaggcaagaacc
aatcctggacagccgttggagatcagaaccagcaagaggacagagcttactcaaggacag
tggatagagtttggctgtgcacctgtgggaccagaagcctatgttacagtgatgttgagg
ctgttcggccgagactcagtcattgcctccataggacccattgacttggcccagaaattc
ggatacaaacttgtaatggtgccagaactcacatgtgggtcccaggtagaggtgatggtg
gtacccccaccatgcatcttcgcccaaggattggttactgttttcaaagaggccccccgg
cgccctggggagaggacaattcagctggcagaaaacagcctgcccctgggagagaggaga
acagtgttcaactgcactttgtttgacatggggaagaataaatactgctttcattttggt
gtttcaaggagaagccgtttctctgccaaagagaaggagtgcatgctaattcagagaaac
atagaaacgtggggaatgtggcagccatggagtcagtgtagcgccacatgtggagatggt
gttcgagagcggcggcgggtgtgtctcacttccttcccctcctccagaccaggctgccct
ggaaagtcctcggagatctccccgtgctctctggaggagtgcgctgctctccggccatcc
aatccatcttctcttccacccaaggatccagtgaagtccaacaacatagtgactgtgact
gggatttccctgtgtttgttcatcatcattgccacggtgctcatcacactttggaggagg
ttcggccggccccccaaatgcagcacccctgctcgacacaactctatccattcccctggc
ttccggaagaactcggatgaagagaacatctgcgagctgagtgagcagcgggggagcttc
tcagatgggggtgatgggcctgggggtagcccaggagacctgggcatccctctgacctac
aggcgcagtggacaggggtctcctgaggatgatgcttctggcagcgagagctttcagtcc
aatgcccagaagatcatcccccctctctttagctatcgccttgcccagcagcagttgaag
gagatgaagaagaaaggtctgacagaaaccaccaaagtatatcacgtgtctcagagtccc
ctcacagacactgccattgatgctgccaccagccctccgttagacttagaaagcccagaa
gaagcagccaacaagttcaggatcaaatctccatttctggatcagcctggggtgggtgct
ggggaaagacctccctccaggctggatttcagtgtgtccccagccagctgtgccattagc
cccagccagaccttgatccgcaagtcccagatgaggcacactggtggcagagggggctcc
tcggaaaggagccaccctaggaattcccacttccggaggacagctagttttcatgaaacc
aagcaggcacgaccattccgggagaggagtatgtccactttgactccacgacaggtccct
ggctacagctccaggacaagaacctgggaccaggcagaggacaggggtaggccttcaggt
cgaggcacccatctgctttctgagaaaggggagcatttccaaggggcaggtgggaccagt
ggtctcctacacccaacctctaaatcctacactgtggggcagcccatgaggaaaccagat
tctggggatcgccaggcaggattagtgacaggaattgagaggacagatcctcacagagct
cgaaggggaccatcccccagccacaggagtgtttcaaggaagcagtcatccccatcttcc
ccgcaagacatctaccagagggtcagtccactgagcccttctcaattcaggaaagacaag
tgtcaaagtttcccagcccaaccagagtttgccttctatgacaatacatcatttggcctc
acagaggctgagcagaggatgctggacctcccagggtattttggctcaaatgaagaggat
gaaaccacgagcacacttagtgtggagaagcttgtcatctag
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