Dipodomys merriami (Merriam's kangaroo rat): 138805174
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Entry
138805174 CDS
T11079
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138805174 (Chd6)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138805174 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
138805174
NCBI-ProteinID:
XP_069845868
LinkDB
All DBs
Position
Unknown
AA seq
2715 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVFNHSPMSDASVNFDDKSPSPFDCSTDQEEKIEDLASHCLSQKD
LYTAEEDTLFSRKMTSHNGMEDNGGRGTGVKKKRKKKEPGEQEGTAKGSKDREPKPKRKR
EPKEPKEPRKTKEPKKAKEPKELKQKDGTKKSRKPREASGTKEAKEKRSCSDSSTRTKSK
KASREQGPTPVERKKKGKRKSETTLESLELDQGLRNSSLRSTEESTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDV
PLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLDKVGMPDEKSLSA
EQGVTDGTSDIPERGSPDKEDNAEDKLDSLQKQTESPGDGGGDGIFGEKKDDSRAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDL
ISKEAQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKEDGTPDATIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQNNSKLYESLTYTQMSRTSESLESEPENAVKIESRDDHLGLPGGSLPR
VTCESFLPNAQDVISINHDESLLPESLEKMMYGKKGLSRDPGSFQESPSTNTESRKDAIT
ISASRDGSCQRGGHKAEIDSASSLMESLEAGVAQMNIKNGKHLLISLSKDGEPCYSEAGQ
RPESAGQLEDKCLASPAVDAESESGFVELCSLSVCDSKRNLSSDQQLIDLLESKRLESKL
ILSQNQSDEEEDEEENEEETLAVVTRTRERPDVLHLTEPTPVIPRGKNRAFHLDEGKKGS
LEVVSQTPGPQRTFPPIACQCHCKHMERWARGLGSEEFEVEKPKAYNPDLFRSRANSTTV
EREPTAVPSEPFKVKLLKDPWKESTEGKKGFPTYISEGSEPKSEDMDFENKDDYDRDGTC
PNQDYPGKYSEEESKSSASGIADLGDDTQEARAPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPPSQQYEPSGTPPTPILASHAGSGNSFSEPETAEHSFSNGAVLAAQL
QQESFVAPVFTKDEQKHRRPYEFEVERDSKARSLEQFSVTHGHPPIVLNGWHGESAIDLS
CSSEGSPGATSPFPVSASTPKIGAISSLQGTLGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAATRRRRGRRKPAEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPGPATSAPE
PPGTASSQAEKAIPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDVSS
LSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGSRRRGRRPRTDLLKAPTIVADS
PSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPM
MLPGVAAVPQMFGVGGLLNTPMATTCTSTAPASLSSTAKSGTAGTEKTAEDRPSSHDVKT
DSLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQ
QARHSEIIGLESQKRKKKKTKGDSPNPNPEPAPGCEREPGSDQNCTEASVPLPPEREHVA
QAGEGVLKDSGTTTN
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaatacagaagaaggagaagcagttgtcaaatttaaaagttttcaatcac
tccccaatgtctgatgcctctgtcaattttgacgacaaatccccatcaccgtttgactgc
agcactgaccaggaagagaaaattgaagatcttgccagtcactgtctgtcccagaaagac
ctgtacactgctgaagaggatacccttttttctaggaaaatgacatcccataatgggatg
gaagacaatgggggtagaggtactggggtaaagaagaaacggaagaaaaaggagccagga
gaacaagagggtacagcaaagggcagcaaggacagggagcccaagccaaagaggaaacga
gagcccaaagagccaaaggaacccaggaagaccaaggaaccgaagaaggccaaggagccc
aaggagctgaagcagaaagacggaactaagaagtcccggaagcctcgggaggcctcaggt
accaaggaggccaaagagaagaggagctgctcggactcttcaaccaggacgaagtctaag
aaggccagcagggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaa
agtgaaaccacattggagagtttagagctggaccagggcctgcggaactcgtccctgcgg
agtactgaggagtccactgagtctgcagacagccagaagcgacgttcaggacggcaagtg
aagcgcagaaaatacaacgaggacctagacttcaaagtggtggatgatgatggggaaaca
attgcggttcttggagctggccgaacatctgcactctcggcttctacactggcctggcag
gctgaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatccaagacc
gtccaggaggttcaccctggagagcctccattcgacctagagctattctacgttaagtat
agaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaaggatcct
cgcatcgcacagaagatcaagcgctttaggaataagcaagcccagatgaagcacattttt
acagagcctgatgaagacttgttcaatccagattatgtggaagtggatcgtatcctggag
gtggcacacaccaaggatgcagaaacaggggaggaagtgacacattacctggtgaagtgg
tgttccctgccatatgaagagagtacatgggagttagaggaagatgtggatcctgcaaaa
gttaaagaattcgaatctcttcaagttcttcctgaaattaagcatgtggagcggcctgct
tcagactcctggcagaagctcgagaagtctcgggaatataagaacagtaaccagctccgg
gaataccaactggagggaatgaactggcttctttttaattggtataacagaaaaaactgt
attttggctgatgagatgggcctagggaaaaccatccagtccatcacgttcctttcagaa
atattcctcaggggaatccatggccctttcctcatcattgcccctctctcaaccatcact
aactgggagcgggaattccggacatggactgagatgaatgccattgtgtaccacggcagt
cagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcacagggaaat
cccctttcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatcctggca
gattgcccagaactgaagaagattcactggagctgtgtgataattgatgaggctcacagg
ttgaagaataggaactgcaaacttctagagggactgaagctcatggcgctggaacataaa
gtgctgctcactggaacacccttgcagaactcagtggaagaactctttagtttgctgaat
tttctggagccatcacagtttccttcagagactgctttcttggaggagtttggagatctg
aaaacagaagaacaggtaaagaaactgcagtctatcctaaaaccaatgatgcttcggcgc
ctgaaagatgatgtggaaaagaacctggctcccaaacaagagacaatcattgaagtagaa
ctgaccaatattcagaaaaagtactaccgtgccatcctggagaaaaacttttccttcctg
acaaagggagcaaatcagcataacatgcccaaccttatcaataccatgatggagctgaga
aagtgctgcaaccatccttacctgatcaatggggcagaggaaaaaattctagaagatttc
cgaaaaacccacagccctgatgcctctgactttcagctacaggccatgatccaggcagca
gggaagctggtgctgatagataaactgctccctaagctgatcgcaggtggccacaaagtg
ctcatcttctcccagatggtgcgctgccttgacatcttggaagattatctcatccagagg
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgtaccagagcggga
ggcctggggattaatctcacggctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggcccaggctcgatgtcaccgcatcggccagagcaaggctgtg
aaggtgtatcgcctcatcacccggaactcctacgagcgggaaatgtttgacaaggccagc
ctgaagctgggcctggacaaggccgttcttcaggacatcaaccgaaagggcagcaccaat
ggagtacagcagctctcaaaaatggaggtggaggacttactccggaaaggtgcttatgga
gccttgatggatgaggaggacgaaggttcaaagttctgtgaagaagacatagatcagatc
ctgcagagaagaacacacaccatcaccatccagtctgaggggaaagggtccacttttgcc
aaggccagttttgtggcttcaggaaacagaactgatatttccttagatgatcctaacttt
tggcagaaatgggctaaaatagctgaattagacactgaagcaaagaatgagaaggaaagc
ttagtgatcgaccgacctcgcgtgagaaaacagaccaaacactacaactcatttgaagag
gatgagctcatggaattttcagagttggacagtgactcagatgaaaggcccacgagatcg
aggcggctcaatgacaaagccaggcgctacctccgagccgagtgcttccgggtggagaaa
aacctgctcatctttggctggggccggtggaaggacatcctgactcacgggcgattcaag
tggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtgtactgtgtc
aagcattataagggggatgagaaaatcaagagtttcatttgggagctgatcaccccttcc
aaagatgggcaggcccagaccctccagaaccactcagggttgtctgccccggttcccaga
gggaggaaagggaagaagacaaagaaccaactactgctcccagaattaaagaatgcggac
tggctagccacctgtaatcctgaggtggtcttacatgatgatggctacaagaaacatctc
aaacagcactgcaacaaagtcctcttgagagtccggatgctgtactacctaaaagctgaa
atactgggagaagcagctgataaagcatttgagggaactcctgccagggagctggatgta
cctctgcctgacatagactatgtggagatcccagtggattggtgggatgctgaggctgat
aagtcccttctcattggtgtgttcaagcatggttatgagagatataatgccatgcgagca
gacccagcactctgcttcctggataaagttgggatgccagatgagaagtctctttctgca
gagcagggcgtcacagatggaacctcagatattcctgaaagaggcagccccgataaagaa
gacaatgctgaggacaaattagatagcctccagaagcaaacggagagtcctggtgatgga
ggcggtgatggcatttttggtgaaaaaaaggatgacagccgggcagcccaggatggctct
gacccagacaaatcaccgtggccggtctcatctgctcttacggctcgtctccggcgtctg
gtcactatttatcagcgttgcaaccgcaaggaactctgcagacctgaaatcctgggacca
ggtaaccaaggatactgggttcaagaggagatgtttaggagaacatcagaaatggatctc
atcagcaaagaagcccagaagaggtggaccaggagagaacaagcagacttctatagaaca
gtgtcttcctttggagtcatttatgatcaagaaaagaaaatcttcgactggacacagttc
cgcatcatttcccgtttagacaagaagtcagatgagagcctagaacattatttttatagt
tttgtggccatgtgccggaatgtgtgtcgtctgcccgcatggaaagaggatggcactcct
gatgctaccatctatgttgaacccatcactgaggagcgggctgcaaaaactctgtaccgc
attgagctgttacggaaggtccgagagcaggtgctcaggtgtcctcagctgcatgagcgt
ctgcagctctgcaggcccagtctctacctcccagtctggtgggagtgtggaaagcatgac
cgagacctgctcattggcactgccaaacacgggctcaaccgtaccgactattacatcatg
aatgacccccagctgtccttcctggatgcttacagaaactatgcccagcataaaaggact
gacacccaggcaccagggagtctctgttgcctttaccagaacaactccaaattatatgaa
tctcttacctatactcaaatgagtaggacttcagaatcccttgaaagtgaacctgagaat
gcggtgaaaatagaaagcagagatgatcatcttggtcttcctggaggcagcttaccccgg
gtgacctgtgaaagcttccttcctaatgctcaagacgtcatttctatcaaccatgatgaa
agtctgctgcccgagtccttggaaaaaatgatgtatggtaagaaaggactcagccgagat
ccaggctctttccaggagagcccaagtaccaacacagaatctaggaaagatgccattacc
atctctgccagcagagatgggagctgccagcgtggtggccataaggcagaaatagattca
gcctcctcgctcatggaaagcttggaagcaggagtggctcaaatgaacattaaaaatgga
aagcatctgttgatatctctttcaaaagatggggagccatgctacagtgaggcaggccag
agacctgaaagcgcagggcagctcgaggacaaatgcttagcttcccccgccgtggacgca
gaaagcgaaagcgggtttgtagagctgtgcagtcttagtgtctgtgactccaaaagaaac
ctgtcgtccgaccagcaattaattgatttactagaaagcaagcgtttagaaagtaagctg
attctgagtcagaaccagagtgatgaggaagaggacgaggaagaaaatgaggaggaaacc
ttagcagtggtaactcgcaccagagaaaggccggatgtgttgcacctcaccgagcccacc
cctgtcatcccaaggggaaagaaccgagccttccatctagatgaaggcaagaaaggaagc
ctagaggtggtgagccagactcctggaccacagaggaccttccctcctatagcctgtcag
tgccactgcaaacacatggagaggtgggcacggggccttgggagtgaggaattcgaagtg
gagaaacccaaagcttataacccagacttgttcaggagcagagccaacagtaccacagtg
gaacgcgagcccactgctgttccatcagagccatttaaagtgaagctcttaaaagacccg
tggaaagaaagtacagagggaaagaagggtttccccacatacatttccgaaggaagtgaa
cccaagtcagaagacatggattttgaaaataaagatgattatgatagagatgggacctgc
cctaatcaagactatccagggaagtactcagaagaggagagcaagagttcagcctccggc
attgcagaccttggggatgacacacaggaagctcgggcccccaccatcgcccagctactc
caggagaaaacactctattccttctcagagtggccaaaagaccgggtgataattaaccgc
ctagataatatctgccacgtggtgttgaaggggaagtggccccccagccagcagtatgag
ccttcaggcacacctcccacccccatcttagccagccatgctggttctggaaacagcttc
tcagagccagaaacggcagagcacagcttcagcaacggggcagtattggcagcccaactc
cagcaggagagctttgtagctccggtattcacaaaagatgaacagaagcacagacgaccc
tatgagtttgaggtggaaagggattccaaggctcggagcctagaacagttctctgtcacc
cacgggcaccctcccatcgtcctcaatggctggcatggggaatcagccatagacctctcc
tgctcatcagaggggtccccgggagccacatcccctttcccagtgagtgccagcaccccc
aagattggagctatcagttcacttcaaggaaccctcggcatggacttgtctgggattcta
caagctggcctgatccatccagtgactggacagattgtcaatgggagcctaaggagagat
gatgcagccacaaggaggcggagagggaggcggaaacctgctgaaggagggatggacctc
atctttctgaaggagcaaacactccaggcaggaatcttggaagtccatgaagacccagga
caggccaccctgagcaccacacaccctgaagggccgggacccgctacctcagcccctgag
cctccaggaacagccagcagccaggctgagaaagccattcccagcaagagcttgcttgac
tggctgcggcagcaggctgactactctttggacgttcctggatttggagcaagtttttca
gataaaccaaagcagaggagaccacgctgtaaagaacctggaaaattagatgtcagctct
ctgagcggagaagagagggttcctgctgtccccaaggagccaggactaaggggatttctc
ccagaaaacaagttcaaccacaccttggccgagcctgttcttcgagacgcaggctcacgc
aggagaggcagacggccacggactgatctcctgaaagcgcccaccatcgtggcagactct
ccctccggaatggggccgctgttcatgaatgggctaattgcgggcatggatctggtaggg
ttgcagaacgtgagaaacatgccaggcatccccctcaccggactggtgggcttcccagct
ggcttcgccaccatgcccacgggtgaagaggtcaagagcaccctgagcatgctgcccatg
atgctcccgggtgtggccgctgtgccccagatgtttggcgttgggggacttctcaacaca
cccatggccaccacctgcacctccaccgcgccagcatctctctcaagcacagccaaaagt
ggcacggcgggcactgagaagacagcggaggacaggccaagcagccacgacgtgaaaaca
gactcactagccgaagacaagcctggtcctagcccgttttctgatcagtccgaacctgca
ataactactagtagtcctgtggcttttaacccatttctcattccaggagtgtctcctgga
ctcatctacccatccatgtttctctcccccggcatgggcatggctctgccagccatgcag
caggccagacactcggaaatcataggtctggagagccagaagaggaagaagaagaagaca
aagggagacagccccaaccccaacccagagcccgctcccgggtgcgagcgggagccaggc
agcgaccagaactgcaccgaggccagtgtccctttgcccccagagagagaacacgtggca
caggctggggaaggggtgctcaaagactccggcaccaccaccaactag
DBGET
integrated database retrieval system
