Dipodomys merriami (Merriam's kangaroo rat): 138805610
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Entry
138805610 CDS
T11079
Symbol
Trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmer03016
]
138805610 (Trdmt1)
Enzymes [BR:
dmer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
138805610 (Trdmt1)
Transfer RNA biogenesis [BR:
dmer03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138805610 (Trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
138805610
NCBI-ProteinID:
XP_069846538
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MEPLRVLELYSGIGGMHHALRESCVHAQVVAAIDVNTVANEVYKHSFPHTQLLEKTIEGI
TLEDFDKLSFNMILMSPPCQPFTRIGLQGDMSDPRTNSFLHVLDILPRLQKLPKYILLEN
VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTTLGIPNSRLRYFLIAKLQSEPLPFQAPG
QVLMEFPKMECGHPQTYAVDAEKKIKEEKIEASACLESSTHCSGKDGILYKLETAEEIER
KYQQNSDLSVKMLTDFLEDDIDMSQYCLPPKSLLRYSLLFDIVSPTCRRSTCFTKGYGTY
IEGTGSVLQTSKDVQIENIYNSLSNLPEEEKLTKLAMLKLRYFTPKEIANLLGFPPDFEF
PEKITMKQRYRLLGNSLNVHVVAKLIKILCE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgcgggtcctggagctgtatagcggcattggcggcatgcaccatgcgctg
agagaaagttgtgtccatgcacaagtggtagcagccatcgatgtaaacactgtcgctaat
gaagtctacaagcatagttttcctcacacacagttgctggagaagacaattgaaggtatt
acattggaggactttgacaaattatctttcaatatgattttaatgagccctccgtgtcag
ccattcacaagaattggcctgcagggtgatatgagtgatccaaggacaaatagcttctta
catgtcctggatatccttccaagattacagaaattaccaaaatatatccttctggaaaat
gttaaagggtttgaagtatcttctacaagagacctattgatacaaacaatagaaaattgt
ggctttcagtaccaagaatttctattatctccaaccactcttggcattccaaattcaagg
ctaaggtatttcctcattgcaaagcttcagtcagagccactaccttttcaagcccctggt
caggtactgatggagtttcccaaaatggaatgtgggcatccacaaacatatgcagtagat
gcagaaaagaaaattaaagaagagaaaattgaagccagtgcttgcttagaaagcagcaca
cactgttctggaaaggatggcattctttataaacttgaaacagctgaagaaattgagaga
aaataccaacagaacagcgatctctctgtgaaaatgctaacggattttctcgaagatgac
attgatatgagtcagtactgtttaccacccaagtcattgctacgatactcccttttattt
gatattgtcagccctacttgcagaaggtccacgtgcttcaccaagggttatggaacctac
attgaagggacaggatctgtgttacagacttcaaaggatgtgcagattgagaatatctac
aattccctttcaaatttgccagaagaagaaaagctaacaaaattggcaatgcttaaactg
cgatatttcacgcctaaagaaatagcaaatctccttggatttcctccagatttcgaattt
cctgagaagataacaatgaagcagcgttaccgtctacttggaaatagtctcaacgtgcat
gttgtagctaaactaatcaagatcctatgtgaataa
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