Dipodomys merriami (Merriam's kangaroo rat): 138805638
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Entry
138805638 CDS
T11079
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmer03037
]
138805638 (Cfap54)
Cilium and associated proteins [BR:
dmer03037
]
Motile cilia and associated proteins
Sperm associated proteins
138805638 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
138805638
NCBI-ProteinID:
XP_069846619
LinkDB
All DBs
Position
Unknown
AA seq
3209 aa
AA seq
DB search
MAASGTLMSSPSDDSPSTSSPPELPPTPPPTITVPLKSPQESKVCWSPLLRWTCPEEKLP
IAAFYGPLDAKNPLLASFEKEIRELLGFMRKKKALATTEEPKPEFRRRCATTLFNIWTKY
APRLPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFSTNFDENGADVNQFKTTFF
PKGFGDETSGLTFHALSGRSICSYELVCDSDANLQNKESVKKCLHILSSLRLIMQVALPQ
EHLCWIIFNGTIYIYTICRKLMIMGQASQALEYLLWASICMESSVPLLSVRYLTWRTTLY
TAVCQCYYDCQAGIHGEAFARRALAKIDELRQLELMSSSMSQEESRRYYREATLKMAVMI
FKRGVFESRRKNKVLFRPKIRLNLKEIQSNSWPRTLTERLLEELFDSTASRFLAVLEALS
DSNRRVLQTGPFATDEVELRDVVTELFIAGKELFVANIGTSGKLEFPRISLLECMVEKKN
VISLDAALKFIKLAFTYEEWSLFESSAVQLLLSLEKENDPESKKAEKDLILLIAIEPLIN
VKRNKGLILPLENDKEGHPIHMYFKKFTNSETYLGNSGSLEDIFQAAAILHFCVCDSSSK
SVQPDKEIIVDMLMLLWQKCKVGIQKINVSKYDYVKYIQKISTNKWVYLLWQISEVIHSC
KVEGIDIVVMAEVTLRLCEILECFGIPKRKFKKSPGTSTKRGNEELSGTPKGIPEGISIL
KKTPVEQLSYAYELLDKTINGMNLHFMLTTLPNGSSVIDHCYVKCSHDTDGDTYKPISEN
SFMMDLHLELIQAQHRIAIALLDQLHVFQIPTDSKSMSTKASEKMKKSRSPDCFTEESVM
NKIKMNKLSKAVYLMQKALLLFENNVISTSALNILMEAYSLIEKVEAEQSALYSHQKYLE
NSKTKKSRIPPPPILLSRTHCSVTFKPAPFISDIKVSWYCILGCKAEGNYGKVRLNHNHL
PNSGEAIPADGKTIFEVKGLETNENYIFAIAAYCSNGKLIGDAIGETTKPILLYPPLSAI
TARMYLTQVAYQTGNYKLAKKVFSTAWDYFVASPPRDEQSIVSLSNIMTITQRSIYSFCR
LHSDILTETSSILLYLFLRNIFVTSDIKIKEENMFCDNIKGNEIFPAQQIARLMECERIL
VALELSNFLNDSNYALQAVTQCYGLLAPIIYHNIVLVPVIQILIKCIVVLQGLPSILFAK
KQVLSYESVQHMIACCIFYMTKILRSWKEYDLAIMMINYGKRMLDTTSSCKSLLGITEPE
EVIEENSLKKPLKPKKPQQVLFPEKINEQLSTLETYLLKMTKQYTSYELSGTEDPIFLYP
VVLNWAVKNSVKEVMKFKQRPRFLEFFTQVMLKCLNDEKFHFLVEITSPVHDFLRRRNES
LLGVKKQKYKENIFNKKSGKNPKKFKAVIIEIGKSSEVGARRRRRRRETLKDFFSKNQNL
LELPEHERNKRADVRKIASRSLRDCLTPIVVNYIRKKRFHQIFLEEMPWRAQMNLFLASA
HYHLLLQKLGERMKAKPGTSHPLVSFRTCDPNLFSLYNSGTVLPTAKLKVENYKGILNFL
STKKKKGTLSPEYEEFSELLNVKAKEETLCKPQIMYESDSQLVLNVKEKDRTSNLVLDHF
MKTFLYCRRAMVLAHRGGYWTLLQNCCRVFWNFTQELQILLKQAVDLYKTFSISQEGFLC
TSVIPFYLGAELLIDMLLQLQISSSLKFIEDNGEFSVPSCYGNIKYDNGGSSLVFEHPLD
DINVVDLKWIHDFVLKSLEILYQVEKWETLVSLAIQFNIISHERYTEQVTPLLVYAQRQL
LLRIKKFQGPDISQQPCARYEAEHKEKITCRNFIGKQLKIDPSSPKIIETGNNVDLLTVL
IYSEYIQAKQLLCVPVDVTDTLRCFRESLEKSRYHNRSIRHSRKLFSLFLAQTQEDKGRV
NSSRSAKRKVEFCLGTEEMHMSTPPDLSQEQFRVCSSVEKNKLPYSQLGLVISSYHQTID
VLQASNQRSLKVQALHSLGSLLIFAEKKRAAFKCWCQALDDIFRKTDVLHTWKEFGTSLP
SATHGANFKDYSEEFLSKVGIWGCLQGAVIAAKIAQFIKTLNTEKRINCCLLSALLFQGL
LRTTLPHPKADRCYAQYEITQLLPGIELFSDNFRADIRSVIASLYYIIRELHFAKHNLII
LPLLALYQYFVSGICQDLVRNLEARILKIEVLIDLGFFSEAFYELAQIFYGKNMPCSIPA
GFKATGKIKLFQSFDSGKPLNSKENMQALDELMSKGQPWTLTTLGQQHLLNKFYFVKAYF
FISLAATINCIPDYSFKQLSRGVITEKNKASAPITKGAASNCFHQLNMNLSGSLDIYKAA
KRKHSLTADSLSRDNGTSVYQFIKFKEEVTLSTLKAMLLMEAEDRLNFLVCEMENIVYKN
LTHCSAGELEIVVESRLQLAEISLQRHRAAYSAAILCSTLNLLQDSKLFKKKAVYDDKET
PVSSSNSVTENEDENEFLDPVSLNAREHFNIHLWLRCRLALVTAFVAQIRGIGIVKENDM
TDCMSLINEVCMEAKNAGNKELEAEFLMQAVMLGLQEKHLKADIIRNLQDIIHLLEGNEF
ISPRSWLTLARSLVLLDDLTKARKFKESPSSKSDKLFLLMQAHHILIEQMLTFGETIEYP
SSSTEYANPLEPLKNLYLPHIMLLAKIKMRIGHALAKQVYYTNRKKDFSKWLPALHLFEI
ALKLCKVSAIEECEVEAEILFQKGKVERQILMEDKSPNIQLDSFFEAIQLSLKNDQNSGL
IRNSYLEMALYYFHLKKPTKKNSATSSSLKTLSRRHSSNREPSNKSEMCTSLAWIAIRAA
AQVSESVLEINLLIGKKNSKSDEINQVILPNIPEFATVDLVSSYTDYLLDDYQADFEASL
LFENEDIPESTDGRKKIQTKVDITWVLLLRYYIHLQRINNMSQLLASTTPESGISLPDDT
LLTSLYNSRLILRQKEMHFYLKKVLNFYSSSCIDEFPKELLQGFNDIQFSEKDLSDSSVK
VFHESSIQSILSLNVTANSSCTDVLSLEMATQALNKELCFQWYLPPLDRAPGDIFQIEPM
VILLYAYNVKPVKIIDVKQSMGNNVYVGFLWVPLNRVISIHEKLSDLAQIAEISLPSVPE
STSKGNMSESPEVEEKPVDTDMENMIIECCSEIVSLFVSGEKTPLTEVPFDVSLPAVFNL
ERLFDLATGCIITGGSLYNWIMSLISRIP
NT seq
9630 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccggcaccttgatgagctctccatccgatgactctccctcgacatcatcg
ccaccggagcttccaccgaccccaccaccgaccatcacggtccctctgaagtcaccccag
gagtccaaggtctgctggagtccgctgcttcgctggacgtgtcctgaggagaagctgccc
attgccgcgttttacgggccgttggacgctaaaaaccctctgctggcctctttcgagaag
gagattcgggagttgttaggttttatgaggaaaaagaaggcgctggcgacgacggaggaa
ccgaagcccgagttccggcgacgttgtgccaccactttgtttaatatctggaccaaatat
gcccccaggctgccagctgactattacaatgaaaagcttctgaaggttggagatagcctt
tgtcaaatgaaagaatataaactggcccttctgcagtgctatggaagatatcttcaacaa
tttagtaccaattttgatgagaatggagcagatgtgaatcaattcaaaactaccttcttt
ccaaaaggttttggagatgaaacttctggacttacatttcatgctttgagtggcagaagc
atttgcagctatgagctagtgtgtgactctgatgcaaacctgcaaaacaaggagtctgtg
aagaagtgtctgcatatcttgtcctccctaaggctcatcatgcaggtggctctcccacag
gagcacctttgctggattattttcaatggtaccatttatatttacaccatttgccgaaaa
ctgatgatcatgggccaggcttcccaggccctagaatacctgctgtgggctagcatatgc
atggagtcctcagtcccactcctgtctgtcaggtacttgacgtggagaactactctttat
acagctgtttgtcaatgctactatgactgccaggctggcattcatggtgaggcattcgct
cggcgtgctttagctaaaattgatgagttaagacagttggaattgatgagctcttcaatg
tctcaggaagaatccagaagatattatagagaggctacattaaagatggcagtgatgatc
ttcaaaagaggagtatttgaatctcgaagaaaaaacaaagttttgtttagaccaaagata
agacttaacctaaaggaaatacaaagtaattcgtggccacgaactcttacagaacggcta
ctggaagagttgtttgacagcactgcatcccggtttctggccgtcttggaagctctttct
gattcaaataggcgagtactgcaaactggaccttttgctactgatgaagtggagcttcga
gatgttgttacagaactgtttatagcaggaaaagaactctttgtagcaaatattggtaca
agtggaaagcttgagtttcccagaatatcactgctggagtgcatggtagagaagaaaaat
gtgatttctctggatgctgctctgaaatttataaaattagcttttacttatgaagaatgg
agtttatttgaatcctcagctgtacaacttcttctttctctggagaaggagaatgatcca
gagtcaaagaaagcagagaaagacttaattcttctgattgcaatagaaccactaatcaat
gtcaagagaaacaaagggttgattttgcctttggaaaatgataaagaaggacatcccatt
catatgtattttaaaaagtttactaatagtgaaacttacctgggaaatagtggctcttta
gaagacatttttcaggctgcagcaatcttgcatttctgtgtctgtgactcttcttcaaag
agtgttcagcctgataaagaaatcattgtggacatgttaatgctcctgtggcagaaatgc
aaagtaggaattcagaagatcaatgtgtccaaatatgactatgtaaaatacattcagaaa
atcagcactaacaaatgggtttatcttctgtggcagataagtgaagtgattcattcctgt
aaagtggaagggattgatattgtggtgatggcagaggtcacattacgattatgtgaaata
ttagaatgttttggaatccccaaaaggaaatttaaaaaatctccaggtacatctacaaaa
agaggaaatgaggaactttctggaaccccaaaagggatcccagaaggtatttcaatacta
aagaaaacacctgtggaacagttgtcttatgcttatgaacttcttgataaaacaattaat
ggaatgaatttacatttcatgttaactactttgccaaatggatcatcagtaattgaccat
tgctatgtcaagtgctcccatgatacagatggagacacttacaaaccaatctcagaaaat
agtttcatgatggatttgcatctggaactcattcaagctcagcaccgaatagccattgca
cttcttgaccaattgcacgtttttcagatcccaactgatagcaaaagtatgtctaccaaa
gcttcagaaaagatgaaaaagtctagaagccctgattgttttacagaagaaagtgtaatg
aacaaaataaaaatgaataagctctccaaagcagtctacttaatgcagaaggccctttta
ctatttgagaataatgtaatatctacatctgcattgaacatcttgatggaagcatattct
ttaattgagaaggtagaagcagaacaaagtgctctatattcacatcagaagtatttggaa
aattcaaaaacaaagaaaagcagaatccctcctccacctattctgctgtcccggactcat
tgctctgtgacgtttaagcctgctccatttatttctgatattaaggtgtcttggtactgc
attttgggttgcaaagcagaaggaaactatggaaaagtaagactaaaccataatcatctc
ccaaattcaggagaagcgataccagctgatggaaaaaccatttttgaagtgaaaggtttg
gagactaatgaaaactacatttttgcaattgctgcttattgttctaatgggaagctcatt
ggtgatgccattggagagacaactaaaccaattctgctttatccacctctttctgctatc
acggctcggatgtacctgacacaggttgcctatcagactggtaactataaattggccaag
aaagttttctcaacagcttgggattattttgttgcatcaccacctcgagatgagcaatcc
attgtttctttaagcaatataatgacaataacacagagaagcatttattccttttgcaga
ttgcattcagatattttgaccgagacttcttcaatccttttatacctttttcttagaaac
atttttgtaacaagtgacattaaaattaaagaagaaaatatgttctgtgataatattaaa
ggcaatgagattttccctgctcaacaaattgctagactgatggaatgtgagagaatatta
gtagcattggaacttagcaactttcttaatgattccaattatgcccttcaagctgtgact
cagtgttatggcctccttgctcctataatatatcacaatattgttttggtacccgttata
cagattttaataaagtgtatagtggttttgcaaggactgccaagtattctcttcgcaaag
aaacaggttttaagttacgagagtgtacagcacatgatagcttgttgtatcttctacatg
acaaagattctacgttcatggaaggaatatgacctggcaataatgatgataaattatgga
aaaagaatgttggacaccacatcaagctgcaaatctctacttggtattactgagccagaa
gaagtaatagaggagaattctttgaagaaacctttaaaacctaagaagcctcagcaggta
ctgttccctgaaaaaataaatgagcagctgtccacattggagacatacctactcaaaatg
acaaaacaatatacttcgtatgaactctcaggaacagaggaccctatctttctttatcct
gtggttttaaattgggctgtgaaaaattctgtgaaggaagttatgaaatttaagcaaaga
cctagattcctggaattctttacacaggttatgcttaagtgtctgaatgatgaaaaattt
cactttttggtggagataactagtcctgttcatgacttcttgagaaggaggaatgagtct
ctacttggagtaaagaaacaaaaatataaggaaaatatttttaataaaaagtcagggaaa
aatccaaagaagttcaaagctgtaataatagagattggaaaaagttcagaagtgggagca
aggagaagacgtagaagaagagaaaccctcaaggattttttttccaaaaatcaaaattta
cttgaattgccagaacatgaaagaaataagagagctgatgttagaaaaatagcatcccga
agcttgagagattgcttgactccaatagtagtaaattacattagaaagaagagatttcat
caaatatttcttgaggaaatgccttggagagctcagatgaacctgtttctggcaagcgca
cactatcacttgcttttacaaaagctaggggagcgcatgaaggcgaaacctggcacttca
cacccgttggtcagtttccgaacctgtgatcctaatctgttctcactatataattcagga
actgtattaccaacagcaaaattgaaagtagaaaactacaagggaatacttaatttcctt
tcaactaaaaaaaagaagggaactttatcaccagagtatgaagaattttctgaacttctg
aatgttaaagccaaggaagaaactctttgtaagccacaaataatgtatgagtctgactct
cagttagttcttaatgtcaaagaaaaggatcgaacatcaaatttggtactggatcatttt
atgaaaacctttttatattgcagaagagcaatggtccttgctcaccgtggtggctattgg
actctacttcagaactgctgtcgagtcttttggaacttcactcaagagctgcagatacta
cttaaacaggcagtagatctttacaaaacattttcaattagtcaggagggcttcctctgt
acctctgttataccattctatttgggagcagaattacttattgatatgttattacaacta
caaattagcagttctcttaagtttattgaagacaatggagagttcagtgtcccaagttgt
tatgggaatatcaaatatgataatggtggttccagccttgtttttgaacatcctctggat
gacataaatgtggttgatttgaaatggatccatgactttgtgttaaaatctttagaaatt
ttatatcaagtggaaaaatgggaaacacttgtatcacttgctattcaatttaatataatt
tcacatgagcgatacacagaacaagtgacaccactgctagtatatgcccaacgtcagctc
cttctgagaattaagaagttccagggccctgatatttcccaacaaccgtgtgcacgatat
gaggctgaacacaaagagaagataacctgccgaaatttcattgggaaacagctcaagatt
gatccttcttcacccaaaataatagaaacaggaaacaatgtggatttactaacagtgctc
atctattcagaatacatccaagccaaacagctcctctgtgtgcctgtggatgtgacagat
actttgagatgctttagagagtccctggaaaagtccagataccataacagatcaatccga
cacagcaggaagttgttttcattgtttcttgcacagacacaagaagacaaaggaagagta
aactcttcaagatctgccaagaggaaagtagaattttgcctggggactgaagagatgcac
atgtcaactcctcctgacctttctcaggagcaattcagagtttgtagttcagtggagaaa
aacaaacttccctattcacaactgggactggtaatttcttcttatcatcaaactattgat
gttctccaagccagcaatcaaaggagtcttaaagttcaggcattgcattcacttggaagt
ctactcatctttgcagaaaagaaaagagccgctttcaagtgttggtgtcaagctcttgat
gatatattcagaaaaacagatgtgctgcatacttggaaagaatttggtacctctctcccc
agtgccacccatggtgccaatttcaaagactacagtgaagaatttctatcaaaagttggc
atttgggggtgtttgcaaggtgctgtcatagcagcaaagatagcacaatttattaagaca
ctgaacactgaaaagaggataaactgttgccttttgtctgcattactctttcagggtttg
cttcgaaccacacttccacatcccaaagcagatcgttgctatgctcagtatgaaatcact
cagctactcccaggcattgaactcttcagtgacaatttcagagctgatatccgttctgtc
attgccagcctgtattacatcatccgggaactgcattttgctaagcacaatctaattatt
ctgcctctccttgccttgtaccagtattttgtttctggaatctgccaagacctagtcaga
aacctagaagcacgaatcctcaagattgaagtccttatagatctgggcttcttttctgaa
gccttttatgagcttgctcagattttttatggaaaaaacatgccttgctcaatacctgct
ggttttaaagctactggaaaaatcaagctatttcagtcatttgactcaggaaaacctctt
aacagtaaagagaatatgcaggcacttgatgaattaatgagtaaagggcagccctggact
cttactaccctgggccaacaacatctcttaaataaattttattttgtaaaggcatacttt
tttataagtttagctgcaaccattaattgtatccctgattattcatttaaacaactcagt
cgtggagttattactgagaaaaacaaagcaagtgctccaatcacaaaaggagctgcttca
aactgcttccaccagctgaacatgaatctttctggctccctggatatttacaaagcagcc
aaacgaaagcattctctgacagcagattcattatcaagggataatggaacttctgtttat
caatttataaaatttaaagaggaagttactctaagcacacttaaggcaatgttactgatg
gaggctgaagacaggctaaacttccttgtatgtgagatggagaatatagtctataagaac
ctcacccattgttctgctggtgagttggagattgtggtggagtccagacttcagctggca
gaaatttccctgcagagacatcgtgcagcatacagtgctgcaatactatgctccacactt
aaccttctccaagattctaaactttttaaaaagaaggcagtatatgatgacaaagagact
cctgtctcatcatcaaattctgtcacagagaatgaagatgagaatgagtttttagatcct
gtttccctgaatgctcgagaacatttcaacatccatctgtggttgaggtgccgcttagcc
ctggtgactgcatttgttgcccagattcgtggcattggaattgtgaaagaaaatgacatg
acagattgtatgagcctcatcaatgaagtgtgtatggaagcaaaaaatgcaggcaacaaa
gagttagaggctgaattcttaatgcaagctgtgatgctgggcctacaagaaaagcattta
aaagcagacattataagaaatcttcaggatataatacatttgcttgaaggaaatgagttt
atttctcctcggtcttggttaaccctggcaagaagcctagttctactggatgacttaaca
aaagctaggaaattcaaggaaagtccttcgtcaaaatcagacaaattatttcttttgatg
caggctcaccacattcttattgaacagatgttaacttttggagaaacaattgaatatcct
tcatcaagcactgaatatgcaaatccattagaacctttgaaaaatttgtatcttcctcat
atcatgttactggccaaaataaaaatgagaattggacatgcattggccaagcaagtatat
tataccaacagaaagaaggacttctcaaagtggttgcctgctcttcatctttttgagata
gcactgaagctctgtaaagtatccgccatagaagaatgtgaggtggaagctgaaatcctt
tttcagaaaggcaaagtagagcgtcaaatactgatggaagacaaatctccaaatatacaa
ctagatagtttttttgaagctatacaactaagcttgaaaaatgaccaaaattcagggttg
ataagaaattcctacctagaaatggccctgtactattttcatctgaagaagccaacgaaa
aagaattcagccacatcatcatcgcttaagactctttccagaaggcatagctctaataga
gaaccatccaataaatctgaaatgtgcacatccctggcctggattgcaatcagagctgct
gcacaggtcagtgaatcagtgctggaaattaacctacttattggaaagaagaattctaaa
tcagatgaaattaatcaagtgatattaccaaacattccagaatttgctactgtggatctt
gtgtcttcatataccgattatttgcttgatgactaccaagctgactttgaggcttcactt
ctgtttgaaaatgaagacattcctgaaagcacagatggtagaaaaaagattcaaacgaaa
gtggatattacttgggtccttctgctgcgctattacatacacctgcaaaggatcaacaac
atgagccaactgctggcatctacaactccagaatctggaatttctctgccagatgataca
cttctcacctccctttacaactctagactgattttacgccaaaaagaaatgcatttttat
cttaaaaaagtcttaaatttttattcttcttcttgtattgatgaatttccaaaagaactt
cttcaaggatttaatgatatacagttttcagaaaaagacttaagtgattcttcagtcaag
gtgtttcatgaaagttccatacagtctattttgtctttaaatgtcactgccaattcatct
tgtacggatgttttgtcattagaaatggcaacacaagccctaaacaaagaactttgcttt
cagtggtaccttcctcctctggacagagctccgggggatattttccaaatagaacctatg
gttatattgttgtatgcatataatgtaaagccagtaaagattatagatgtcaaacagtcc
atgggtaacaacgtctatgttggttttctctgggttccactgaacagagtcatttcaatt
catgagaaactatctgatcttgcacaaattgctgaaatatcattgccatctgttcctgaa
agtacttcaaagggaaatatgtctgagtcaccagaagtagaagagaagcctgttgacaca
gatatggaaaacatgattattgaatgttgctctgaaattgtgtctctatttgtgagtgga
gagaaaacaccactaactgaggttccatttgatgtctccctgcctgctgtattcaatctt
gagagactttttgatcttgctactggttgtattataacaggaggaagcctttacaactgg
ataatgtcacttatttctcgaataccttaa
DBGET
integrated database retrieval system
