Dipodomys merriami (Merriam's kangaroo rat): 138805644
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Entry
138805644 CDS
T11079
Symbol
Fbh1
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138805644 (Fbh1)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138805644 (Fbh1)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138805644 (Fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
F-box
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
138805644
NCBI-ProteinID:
XP_069846636
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MCISSQPPVKVQSLWKSSPSEVQRFKRKHLTAIDCQHLAQSHLAGTQPFGQRWTNRDPNQ
GLYPRPRTQRGSRGQGCRRHSPEFFLAGQQQCTNDMAKSSSVGQDSCQDSEGHMIFPAEG
SCALPQEGDGEVRVGSSRSALPPRKRSRSFEEDSNKVTGTRQWDGVAKKTARLQLSPPCT
RPREAMQEAEDCLSQHSADSGETVQDIEDIGPDPIPDSYYGLLGTLPCQEPPSHICSLPN
EVLRHIFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGIL
LNCGIEKESDLCVLNLIRYTATTKCSPSVDPERVLWSLRDHPLLPEAEACVRQYLPDLYM
AAGGVNVWALVAAMVLLSSGVHDIQQLLFCLRRPGSTVTMPDVTETLYCIAVLLYAMREK
GINISNRIHYNIFYCLYLQENSNTQATKVKEEPSVWPGKKASIQLTHEQQLILNHKMEPL
QVVKIMAFAGTGKTSTLVKYAEKWSQSRFLYVTFNKSIAKQAELVFPSNVICKTFHSMAY
GHVGRKYQLKKKLNLFKLTPFMVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHV
PIWCKNSQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECKEEAYQMTHDGYLKLWQLSKP
LLASFDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVF
YLTQSFRFGVEIAYVGATILDVCKRVRKKTLVGGNHQSGIRGDVKGQVALLSRTNANVFD
EAVRVTEGEVPSKIHLIGGIKSFGLDRIIDIWTLLQPEEERKKRNLVIRDRFIRRWVHKE
GFSGFKRYVTAAEDKELEAKIAVVEKYNIRIPELVERIERCHIEDLDFAEYILGTVHKAK
GLEFDTVHVLDDFVKVPCARHNLAQLPHFRVESFSEDEWNLLYVAVTRAKKRLIMTKSLE
NILTLAGEYFLQAELTSNVLKTGVVRCCVGQCNNAIPVDTVLTMKKLPITYSNRKENQGG
YLCHSCAEQRIGPLAFLTASPEQVRAMERTVENIVLPRHEALLFLVF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatatcatcacagcctcctgtcaaagtgcagagcttgtggaaaagctcaccaagt
gaggtgcaacgatttaagcggaagcatcttacagctatcgactgccagcatttggctcag
agtcacttggctggaacccagcccttcggccaaagatggacaaacagagatcccaaccaa
ggtctctatcctagacccagaacacaaagagggagtaggggtcaaggatgtcgaagacac
agtcctgagttcttcctagctggccagcagcagtgcaccaatgacatggccaagagcagt
tcagttggccaggacagctgtcaggactctgagggtcacatgatctttcctgctgagggc
agttgcgccctgccccaggaaggcgatggagaagtgagagtaggctcatcaaggtcagct
ctacctcccaggaagaggtcccggtcctttgaggaagacagcaataaggttacagggacc
aggcagtgggatggagtggcgaagaagactgcacggcttcagttgtccccaccgtgcaca
aggcctagggaggccatgcaagaagcagaggactgtttgtcacagcactctgcagattct
ggagaaactgtccaagacattgaggacattggtcctgaccccattcctgactcatactat
ggccttcttgggaccttgccctgccaagaaccaccaagccacatttgtagcttgcctaat
gaagtcctgaggcatatctttgccttcctgcctgtggaagacctctactggaatctgagc
ctggtgtgccacctgtggagggaaataatcagtgacccactgttcattccttggaaaaag
ctgtatcatcgatacctgatgaatgaagagcaagctgtgagcaaagtggacggcatcctc
ttgaactgtggcatagaaaaagagtcagacttgtgtgtgctgaacctcataagatacaca
gccaccactaagtgctccccaagtgtggatcctgagagggtgctgtggagtctgagggat
catcctctccttcctgaggcagaggcatgtgtgcgtcagtacctgcccgacctctacatg
gctgctgggggcgttaatgtctgggccttggtggcagccatggtgcttctctccagcggc
gtccacgacatccagcagctgctgttctgcctcaggagacccggctccacagtgaccatg
ccagatgtcaccgaaaccttatactgtatagctgtgctgctctacgccatgagggagaag
ggaatcaacatcagcaataggattcactacaacattttctactgcctatatcttcaggag
aattctaatactcaggccactaaagttaaggaggagccatctgtctggccaggcaagaaa
gcatccattcaacttacacatgagcaacagctgattctgaaccataaaatggagcctctc
caggtggtaaaaattatggcctttgcaggcaccgggaagacctctaccctagtcaagtac
gccgagaagtggtctcagagcagatttctgtatgtcacattcaacaagagcatcgcaaag
caggctgagctcgtcttccccagtaatgtcatctgcaaaacctttcattccatggcctat
gggcacgtcgggcggaagtaccagctgaagaagaagttgaatctcttcaagttgacgcct
ttcatggtcaattcggttcttgctgaagggaaaggtggattcatcagggccaagcttgta
tgtaagactttggaaaacttctttgcctccgctgatgaagagctgactattgatcatgta
cctatttggtgtaagaacagccaaggacagagagtcatggttgaacagagtgagaagttg
aatggtgtccttgaagcaagccgactctgggacaacatgcggaagctgggagaatgcaaa
gaagaggcttaccaaatgactcatgatggctatttgaaactctggcagctgagcaagcct
ttgcttgcctcttttgacgccatctttgtggatgaggcccaggactgtaccccagctata
atgaatatagttctgtctcagccatgtgggaagatctttgtaggggacccacaccaacag
atctataccttccggggtgcagtcaatgctcttttcacagttccccacacacacgtcttc
tatctcacacagagttttagatttggtgtggaaatagcttatgtgggagctactatcttg
gatgtctgcaagagagtaaggaagaagacgttggttggaggaaaccatcaaagtggcatt
cgaggtgatgtaaagggacaagtggctcttttgtcacggactaatgccaacgtgtttgat
gaggctgtcagggtgacagaaggagaagtaccttccaagatacatttgattggggggatt
aaatcatttggactggacagaatcattgatatttggactcttcttcagccagaggaagaa
cggaagaaacgaaacctcgtcatcagggacagattcatcagaagatgggtgcataaagaa
ggcttcagtggctttaagagatatgtgactgctgctgaggacaaggagcttgaagcaaag
atcgctgtggttgaaaagtacaatatcaggattccagaactggtggaaaggatagaaaga
tgccacatagaagacttggactttgcagagtacatcttgggtactgtacacaaagccaaa
ggcctggagtttgacactgtgcacgttctggatgatttcgtgaaagtgccttgtgccagg
cataatcttgcccagcttcctcactttagagttgagtcattttctgaggatgagtggaat
ttactgtatgttgcagtaacgcgtgccaagaagcgtctcataatgaccaaatcactggaa
aacattttgactcttgctggggagtacttcctgcaagcagagctgacaagtaatgtctta
aaaacaggagtggttcgctgctgtgtgggccagtgcaataacgccatccccgtggacacg
gtcctcaccatgaagaaactgcccatcacttacagcaacaggaaggaaaaccagggtggg
tacctgtgtcactcatgtgcagagcagcggattgggcctttggcgttcttaactgcctct
ccggagcaggtacgggccatggagcgcactgtggagaacatagttctgcccaggcacgaa
gccctgctcttccttgtcttctga
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