Dipodomys merriami (Merriam's kangaroo rat): 138805747
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Entry
138805747 CDS
T11079
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138805747 (Chd7)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138805747 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
138805747
NCBI-ProteinID:
XP_069846881
LinkDB
All DBs
Position
Unknown
AA seq
2995 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGGQ
MGVYPGMQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQPQPQPPQPAPSGPPAQGH
PQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQGNPFIATSGPGHLSHVPQQS
PSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLTFSSRSQTVPSP
TINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPSAVGFPSSSGQGLM
HQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPM
DVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELTGHMRPNGCPG
VGLADPQAIQERLMPGQQHPGQQPSFQQLPTCAPLQAHPGLHHQSSPPHPHHQPWAQLHP
SPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSVEQQPQQKKKKKK
NNHIIAEDPSKSFGKDDFPGGVDNQELNRNTLDGSQEEKKKKKRPKAKKDPKEPKEPKEK
KEPKEPKTPKTPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSDASALKKKVNKGKTEGS
ENSDLDKTPPPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDS
PSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWAS
VEDLEKDKRIQQKIKRFKSKQGQNKFLSEIEDELFNPDYVEIDRIMDFARSTDDRGEPVT
HYLVKWCSLPYEDSTWELSQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREY
KNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVI
APLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT
TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE
ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE
ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE
EKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL
EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM
SGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIES
EGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQT
RLYSAVKEDELMEFSDLESDSEEKPCVKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWT
DILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVNH
SGLSAPVPRGRKGKKVKAQSTQPVVQDADWLTSCNPDTLFQEDSYKKHLKHHCNKVLLRV
RMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKHG
YEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRT
PFKDEIDEFANSPPEDKEEPMEIHAPGKHSESSAELGQLYWPTTSTLTTRLRRLITAYQR
SYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFG
VIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDDPPDLASL
IEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLLV
GAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGASSLSSLNPLAVGFGQIPPVISSAHS
HDEKVPEQGEGKAEESENSMAKERSEGKEEEEEADTGGKDSKQECEAEASSVKSELKGTD
GSAEPGSKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDE
TRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDF
QGLIPGHTPTAVDSSLQRRSFAELSVVGQPSISGGEDITTSPQLSKEDALNLSIPRQRRR
RRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLT
SKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGL
DLLFMSHKRTSLSAEDAEVTKAFEEEIETPPIRNIPSPGQLDPDTRIPVVNLEDGTRLVG
EDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLT
GEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDR
LLTGPVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQ
NLQSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSA
ATGNTTTASSQGEPEDGTSKVEEKGNENEDENKDSEKSTDAVSATDSVNGSVGAATAPAG
LPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSTEEKAADKA
EGGPCKDGGNLDSSDAEESLDKTAESSILEDETVQGEELDSLDGGDDIENNEHDE
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctttttggcgaggatgggaatatcttcagcgaaggc
cttgaaggtcttggagaatgtggataccccgaaaacccagtaaatcccatgggtcagcag
atgccaatagaccagggctttgcctctttgcagccatcccttcatcatccttccacgaat
caaaatcaaaccaagttgacccattttgatcactataatcagtatgaacagaagatgcat
ctgatggatcagcctaacagaatgatgggcagtgcccctgggaatggactggcatctcca
cactcacagtatcacaccccccctgttccccaggtgccccatggtggcagtggtggtcag
atgggagtctaccccggcatgcagaatgaaaggcacggtcaatcttttgtggacagtggc
tccatgtgggggccccgggctgttcaggtaccagaccagatacgagctccctaccagcaa
cagcagccacagccacagccaccacagccagctccatcggggccaccagcacagggccac
cctcagcacatgcagcagatgggcagctatatggcacgtggggatttttccatgcagcag
catggtcagccacagcagaggatgagccagttttcccaaggtcaagagggcctcaatcaa
ggaaatcctttcattgccacctcaggacctggccacttgtcccacgtgccccaacagagt
cccagcatggccccctccttgcgtcactcggtgcaacagttccatcaccacccccctact
gctctccatggagaatctgttgcccacagtcccagattctccccgaatcctcctcaacaa
ggggctgttaggccacaaacacttacctttagctctcggagccagacagtcccctctcct
actataaacaactcagggcagtattctcgatatccttacagtaacctaaatcagggatta
gttaacaatacagggatgaatcaaaatttaggccttacaaataataccccaatgaatcag
tccgtaccaagataccccagtgctgtaggattcccatcaagcagtggtcaaggactaatg
caccagcagcccatccaccccagtggctcacttaaccaaatgaacacacaaactatgcat
ccttcacagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagcaatg
agtaatccagcaggcacgcctcctccacaagtcaggcctggaagtgctgggataccaatg
gatgttggcagttatccaaatatgccccaccctcagccatctcaccagccccctggtgcc
atgggaattggacagaggaatatgggccctagaaacatgcagcagtcgcgtccatttatg
ggcatgtcctcagcaccaagggagttgacagggcacatgagaccaaatggttgtcctggt
gttggccttgcagatccacaagcaatccaggaacgactgatgcctggccaacaacatcct
ggtcagcagccgtcttttcagcagttgccaacctgtgctccactgcaggcccacccgggc
ttgcatcaccagtcttcacctccacacccccatcaccagccttgggcacagctccaccca
tcaccccagaacaccccgcagaaagtgcctgtgcatcagcattctccatcggagcccttt
ctagagaaaccagtgccggatatgactcaggttagtggaccgaatgctcagctagtgaag
agcgatgattacctgccatcagtagaacagcagccacagcaaaagaagaagaaaaagaaa
aacaaccacattattgcagaggatcccagtaaaagttttggtaaagatgacttccctggt
ggggttgataaccaagaactaaataggaacacattggatgggtctcaagaagaaaaaaag
aaaaagaaaaggccgaaggcaaaaaaagatccgaaggaaccgaaagaacctaaggagaaa
aaagagcccaaggaacccaagacccccaaaacccctaagattcccaaagagccaaaggaa
aagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataagaaa
cctgattcagatgcaagcgctttgaagaaaaaggtcaacaagggaaaaacagaaggttct
gaaaattcagacttggacaaaacacccccaccatctcctgctcctgaagaagatgaagac
ccaggtgttcagaagagaagatccagcaggcaggtgaagagaaagcggtacactgaagac
ttggagttcaagatttctgatgaggaggcagatgatgcagatgctgctggccgagactca
ccctctaatacctctcagtctgagcagcaggaatctgttgatgcagaaggcccagtggta
gaaaagattatgagcagtcggtcagtgaaaaagcagaaggaatctggagaggaggtagaa
gttgaggaattttatgtgaaatacaaaaacttctcttatcttcattgtcaatgggcatct
gtagaagatctggaaaaagataaaagaattcagcaaaagattaaacgatttaagtcaaaa
cagggccaaaacaagttcctttcagagattgaagatgagctttttaatccagattatgtg
gagattgaccggataatggacttcgcacgtagcacagatgaccggggagagcctgtgact
cactatctggtgaagtggtgctcacttccttatgaagacagcacatgggagctgagtcag
gacatagatcaagcgaaaatcgaagagtttgagaaactcatgtccagggaaccagaaaca
gagcgtgtggagcgacctcctgctgatgattggaagaaatcggagagttccagggagtat
aaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttcaat
tggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatccag
tccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagtgatt
gccccattgtccacaatccccaactgggaaagggaattccgtacctggacagagttgaat
gtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatgtac
ttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatcacg
acatttgagatgattttgactgattgtcctgagctgcggaatattccctggcgctgtgtg
gttattgatgaagcccacagactgaagaatagaaactgcaagctgttggaaggtctcaag
atgatggacttggaacacaaagtgctgctgacgggaaccccgctacagaacactgtggag
gagctctttagtttgcttcatttcttggaaccaagtcgcttcccttcagaaaccaccttt
atgcaagaatttggtgatctaaaaacagaagagcaggtgcaaaaacttcaggctattcta
aagccgatgatgttgagacgtctcaaagaggatgtagaaaagaacttggcccccaaagaa
gaaactattattgaagttgagctaacaaacattcagaagaaatattaccgagccatcctt
gagaagaattttacatttctttccaaaggtggtggacaagctaacgtacctaacctttta
aacactatgatggaactacgaaaatgctgcaatcatccatacctaatcaatggtgctgaa
gagaaaattttggaagagtttaaagaaacacacaatgcagagtctccagattttcagctc
caggcaatgatccaggctgctggcaagctagtgctgattgacaagctgttgccaaaactg
aaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacattctg
gaagactacctcattcagagacggtacccatatgaaaggattgatggccgagtaagaggc
aacctccgccaggcagctattgacagattctccaaacctgattctgataggtttgtcttc
ctcctatgtacaagggcaggaggtttaggcattaatcttactgctgctgatacctgcatc
atctttgattcagactggaacccccaaaatgatctccaggctcaggctagatgtcatagg
ataggacaaagtaaatctgtgaaaatctacaggctgattacaagaaattcctatgaaagg
gaaatgtttgacaaggctagtttgaagcttggtctggataaagctgtgctacaatctatg
agtggaagagaaaatgctactaatggggtacaacaactttccaagaaagaaatagaggac
cttctacgaaagggggcttatggcgcactcatggatgaggaggatgaaggatctaagttc
tgtgaagaagatattgaccagattctcctacggaggactcatactattaccattgagtct
gaaggaaagggatccacatttgctaaggccagttttgttgcatctggaaataggacagat
atttctttggatgatccaaatttctggcaaaagtgggcaaagaaggctgaattggacatt
gatgccttaaatgggaggaacaatctggttattgacactccacgagtaagaaagcagacc
aggctatacagtgcagtgaaagaggacgagctaatggagttttcagacttggaaagtgat
tctgaggaaaagccttgcgtcaagccacggcgtccccaggataagtcacagggctatgcc
cggagcgagtgtttccgagtagagaagaatctgctggtctatggctggggtcggtggaca
gacatcctatcacatggacgctacaaacgtcaactcactgagcaagatgtggagactatc
tgcagaaccattcttgtgtactgtctgaatcattacaaaggagatgagaacatcaaaagc
ttcatctgggatctgatcacacccacggctgatggacaaactcgagccttggtcaatcat
tctggtctgtcagccccagtgccaaggggaaggaaggggaaaaaggtgaaagcccagagt
acacagccagtggtgcaagatgctgactggctgaccagctgcaacccagataccctgttc
caagaggacagctacaagaagcacctgaagcaccattgcaacaaggtcctgctgcgtgtc
cgcatgctgtactacctaagacaagaagtgataggagaccaagcagataagatcctagag
ggtgctgactcaagtgaagcagatgtttggatccctgaacctttccatgctgaagttcct
acagattggtgggataaggaagcagataaatccctcttaattggagtgttcaaacatggc
tatgagaagtacaattccatgagagctgaccctgcactgtgctttctggaacgagttggt
atgcccgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagatggc
ggcgatggtggagaatttgatagagaagatgaagacccagaatataaaccaaccagaaca
ccgttcaaggatgaaatagatgaatttgccaattctcctccagaggataaggaagagccc
atggaaattcatgccccaggcaagcacagtgagagtagtgctgagttaggccaactttac
tggcctaccacttcaaccctgactacgcgtctgcgccggctcattactgcctatcagcgc
agctataaaaggcaacaaatgaggcaagaggccctaatgaagactgaccggcggagacgg
cggccccgggaggaagtgagagcgctggaggcggaaagggaagctattatatctgagaag
cggcaaaagtggacgagaagagaagaggctgatttttaccgagtggtatccacctttggg
gttatttttgaccctgtgaaacagcaatttgactggaaccagttccgagcctttgccagg
cttgacaaaaagtctgatgagagtttggagaagtacttcagctgctttgtggccatgtgc
aggcgagtctgtcgaatgcctgccaagccagatgatgatccacctgacctcgcctccctg
attgagcctatcacagaggaacgggcctctagaactctgtaccgaattgagctgctgcgg
aagatccgcgagcaggttctgcatcacccacagctaggagagaggctgaagctctgccag
cccagcctggatcttcccgagtggtgggagtgtggacggcatgaccgggacctgctggtg
ggtgctgcgaagcatggggtcagccggacagactaccacatcctcaatgaccccgagctg
tccttcttggatgcacataagaactttgctcaaaaccgaggggcaagtagtctctcctcc
ttgaacccattggctgtgggctttgggcagattcctccagtcatctcatccgctcacagt
cacgatgagaaggtaccagaacaaggtgaaggcaaagcagaggagtctgaaaactcaatg
gccaaagagaggtccgaggggaaagaagaggaagaagaagccgatactgggggcaaggac
agcaagcaggaatgtgaggctgaggccagctctgtgaagagtgagctgaaagggacagat
ggcagtgcagagccagggtctaaatccgtctcagagaaaggctcagaagaagatgaagaa
gagaagttagaggatgatgataagtccgaggaatcatcccagcctgaagcaggagctgtc
tctagaggaaagaatttcgatgaagaaagcaatgcttctatgagcactgctagggatgaa
actcgagatggattctacatggaggatggagacccctcagtagcacagctccttcacgaa
agaacatttgccttctcattttggcctaaggatagagtaatgataaaccgattagacaac
atctgtgaagcagtgctgaaaggcaaatggccagtaaataggcgccagatgtttgatttt
cagggcctcatccctggccacacacccactgctgtggacagttctctgcagaggaggagc
ttcgctgagctctctgtggttggccagcccagcattagtgggggtgaggacattaccact
tctcctcagctgtcaaaggaagatgccctcaacctctccatccctcgccagcggcggcga
aggaggagaaaaattgaaatcgaggccgaaagagctgccaagaggcgaaatctcatggag
atggttgcccagctgcgagagtctcaggtggtctcagaaaatggacaagaaaaagttgta
gatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttttcatctcttact
tcaaagtttatcttgcctaatgtctcgacaccagtatcagatgcctttaagactcaaatg
gaactgctccaagcaggcctttctcgcacacccacaaggcatctgcttaatggctccctg
gtagatggagagcctcccatgaagaggcggcggggcaggaggaaaaacgtggagggcctt
gatctgcttttcatgagccacaaacggacatcgttgagtgcagaggatgctgaggtgacc
aaagcatttgaagaagaaatagaaaccccaccaataagaaacattccttctcctggacaa
ctggacccagacactcggattcctgttgtaaatcttgaagatggaacaaggctggtggga
gaagatgcacctaaaaacaaggacttggttgaatggctgaagctgcatcctacttacact
gttgatatgccaagttatgtaccaaagaatgcagatgtgctgttttcctcgtttcagaaa
ccgaaacagaaacgacatagatgtcgaaatcctaataaattggatataaacactttgaca
ggagaagaaagagtgcctgttgttaataagcgaaatgggaagaagatgggtggagctatg
gcacctcctatgaaggatctacccaggtggctggaagaaaatcctgaatttgcagttgcc
ccagactggactgatatagttaagcagtctggatttgttcctgagtcaatgtttgaccgt
cttctcactggacctgtggtgcggggagaaggagcaagcaggagaggaagaaggcccaag
agtgaaattgctcgagcagccgcagcggctgcggctgtggcctccacttcagggatcaac
cctctgttggtgaacagcctatttgctggaatggacctgacaagccttcagaatctccag
aacctccaatctctccagctggcaggcctcatgggcttccctccaggactggcaacagct
gccactgccggaggcgacgctaagaaccctgctgccgtgctgcccctgatgctgccagga
atggcaggcctgcccaacgtgtttggactgggcgggctgctgaacaaccccctctcagct
gctactggaaacaccactactgcttctagtcaaggagaaccagaagacggcacttcaaaa
gtggaagagaaaggaaacgagaatgaggacgagaacaaagactctgagaaaagcacagat
gctgtttcagctactgactctgtgaatggatctgttggtgctgctactgccccggctgga
ttgccctccaacccactagccttcaaccctttcctcctgtccaccatggccccaggcctc
ttctacccatccatgtttctacctccaggacttgggggattgacgctgcctgggttccca
gcattggccggactccagaatgccgtgggctccactgaagaaaaggctgctgacaaggcc
gagggaggcccctgtaaagatggagggaacctcgacagcagtgatgccgaggagagcctg
gacaagactgcagagtcctccatcttagaagatgagaccgtgcagggcgaagagctagac
tcactggatgggggggatgacatagaaaacaatgaacatgatgaataa
DBGET
integrated database retrieval system
