Dipodomys merriami (Merriam's kangaroo rat): 138805915
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Entry
138805915 CDS
T11079
Symbol
Ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138805915 (Ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138805915 (Ubr5)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138805915 (Ubr5)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
HECT type E3
138805915 (Ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
138805915
NCBI-ProteinID:
XP_069847273
LinkDB
All DBs
Position
Unknown
AA seq
2798 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFSVQPDRLELGKPDNNDGSKLNSNSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLAEDL
QWWPDKDGTKFMCIGALYSELLAVSSKGELHQWKWSESEPYRNAQNPSLHHPRATFLGLT
NEKIVLLSANSIRATVATENNKVATWVDETLSSVASKLEHTAQTYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKSMEKANKTTEAKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSSNTNCQSSSGPDADPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSIAFLGQNERNVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLVNLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMNLEQAVV
LEQNLQMLQTFISHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVE
AIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGASSSDHQDPVSPP
IAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTAATGSGQGPSTSTIPGPSTEPSVVESKD
RKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKIA
KAEVSSSEKEEDVFMGMVCPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLT
ATNLVTLPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTASPEDSDMPDHDLE
PPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRL
DCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAITVTMRFLRSVARVFVILS
VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLA
STSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQAQSSYIIRNPQQRRISQSQPVRGRDEE
QDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAA
ETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQ
SDDIEQETFMLDEPLERTTNSSHASGAAQAPRSMQWAVRNTQHQRAASTAPSSTSTPTAS
SAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMG
LIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALA
SAGDPGHPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNY
ALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTREL
LELGIDNEDSEHENDDDTNQSATLNDKDDDSVPAETGQNHPFFRRSDSMTFLGCIPPNPF
EVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSASSGKCLMEVTMDRNCLEVLPT
KMSYAANLKNVMNMQNRQKKEGEEQNMQAEEAENSKPGPSAHDLAAQLKSSLLAEIGLTE
SEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEV
KESKFRREMEKLRNQQSRDLSLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVT
FKDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTSLMQRLRNRGERDRER
EREREMRRSSGLRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGER
LYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADS
ILDLGLLDSSEKVQENRKRHGSSRSVVDMDLDDTDDGDDNAPLFYQPGKRGFYTPRPGKN
TEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQ
LILASQSSDADAVFSAMDLAFAIDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEH
RMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESG
ENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQH
LPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatccatttcgtggttcacccgctgccggggaccgaggaccagctcaatgac
aggttacgagaagtttcagagaaactgaacaaatataatttaaacagccatccccctttg
aatgtattggagcaggctactattaaacagtgtgtggtgggaccaaatcatgctgctttt
cttcttgaggatggtagagtttgcaggattggtttttcagtacagccagatagattggaa
ttgggtaaacctgataataatgatgggtcaaagttgaacagcaactcgggggcagggagg
acttcaaggcctggtaggacaagtgactctccatggtttctctcagggtctgagaccctg
ggcaggctagcaggcaacaccttgggaagccgttggagttcaggagttggtggaagtgga
ggaggatcctctggtaggtcatcagctggagctcgagattcccggcggcagactcgagtc
attcgaactggacgtgatagaggatctggacttttaggcagtcagccccagccagtgatt
ccagcatccgttattccagaggagctgatctcacaggcccaagttgttttacaaggcaaa
tccagaagtgtaattattcgagaattacaacgaacaaatcttgatgtaaaccttgctgta
aataatttacttagccgggatgatgaagatggagatgatggagatgatacagccagtgaa
tcttatttacctggagaggatcttatgtcgcttcttgatgctgatattcattctgctcat
ccaagtgtcattattgatgcggatgccatgttttctgaggacattagctattttggttac
ccttcttttcgtcgttcatcactttccaggctaggctcatctcgagttctccttcttccc
ttagagagagactctgagctgttgcgtgaacgtgaatccgttttacgtttacgtgagcga
aggtggcttgatggagcctcatttgataatgagaggggctctaccagcaaggaaggagag
ccaaacttggataagaagaacacaccagttcaaagtccagtatctctagcagaagactta
cagtggtggccagataaggatggaacaaaatttatgtgtattggggctctgtattctgag
cttctggctgttagcagtaaaggagaactgcatcagtggaagtggagtgagtctgagcct
tacagaaatgcccagaatccttcattacatcatccaagagcaacatttttggggttaacc
aatgaaaagatagtcctcctgtctgcaaatagtataagagcaactgtagctacagaaaat
aacaaggttgctacctgggtggatgaaacgttaagttctgtggcttccaaattagagcac
actgcacagacttactcagaacttcaaggagaacgcatagtttctttacattgctgtgct
ctttatacctgcgcccagctggagaacaatttatattggtggggggtagtcccttttagt
caaaggaagaaaatgctagagaaagctagagcaaaaaacaaaaagcccaaatccagtgct
ggtatttcctccatgccaaatatcactgttggtacccaggtatgtttaagaaataatcct
ctttatcatgctggagcagttgcattttcaattagtgctgggattccgaaagttggtgtc
ttaatggagtcagtttggaatatgaatgacagctgtagatttcaacttagatcccctgag
agcctgaaaagcatggaaaaagctaacaaaactactgaagctaagcctgaaagtaagcag
gaaccagtgaaaacagaaatgggtcctccaccatctccagcatctacatgcagtgatgcc
tcctcaattgcaagcagtgcgtcaatgccatacaaacgacgtcggtcaacccctgctcca
aaagaagaggaaaaagtgaatgaagagcagtggtctcttcgggaagtcgtttttgtggaa
gatgttaagaatgttcctgttggcaaggtgctaaaagtggatggtgcctatgttgctgta
aagtttccaggaacatccagtaatacaaactgtcagagcagctctggtccagatgctgac
ccttcctctctccttcaggattgtaggttacttaggatcgatgaacttcaggttgtcaaa
actggtggaactcccaaagtgcccgactgttttcagaggacacctaaaaagctttgtata
cctgaaaaaacagaaatattagcagtgaatgtagattccaaaggtgtacatgctgttttg
aagactggaaactgggtacggtactgtatctttgatcttgcgacaggaaaagctgaacaa
gaaaataatttccctacaagcagcattgcctttcttggtcagaatgagaggaatgtagcc
attttcactgctggacaggaatctcccattattcttcgagatggaaatggtactatctat
ccaatggccaaagattgcatgggaggaataagggatcctgattggctggatcttccacct
attagtagtcttggaatgggtgtgcattctttagtaaaccttcctgctaattcaacaatc
aaaaagaaagcggctattatcatcatggctgtagagaaacaaaccttaatgcaacacatt
ctacgctgtgattatgaggcttgtcggcagtatcttatgaatcttgagcaagctgttgtt
ttagagcagaatttacagatgctacagacgttcattagtcacagatgtgatggaaatcgg
aatatcttacatgcttgtgtatcagtttgctttccaaccagtaataaggaaactaaagaa
gaagaggaagcagaacgctctgaaagaaatacatttgcagaaaggctttctgctgtagag
gctattgcaaatgcaatatccgttgtttccagtaatggcccaggtaatcgggctggatct
tcaagtagtcgaagtttgagattacgagaaatgatgagacgttcattgagagcagctggt
ttgggtagacatgaggctggagcttcatccagtgaccaccaggatcctgtatcacccccc
atagctccccctagttgggttcctgaccctcctgcaatggatcctgatggtgacattgat
tttatcctggcccccgctgtgggatctcttaccacagcagcaactggcagtggtcaagga
ccaagcacctccaccattccaggtccttccacagaaccttctgtagtggaatccaaagat
cgaaaggcaaatgcacattttatactaaaattgttatgtgacagtgtggttctgcaaccc
tacttacgagaactcctttctgccaaagatgcaagaggaatgactccatttatgtcagct
gtaagtggccgagcttaccctgctgctattaccatcttagaaacagctcagaaaattgca
aaagctgaagtatcctcaagtgaaaaagaagaagatgtatttatgggaatggtttgccca
tcgggtaccaatcctgatgactctcctctatatgtcttatgttgtaatgacacctgcagc
tttacatggactggagcagagcacataaaccaagatatttttgaatgtcgaacttgtggt
ttgctggagtcactttgttgttgtacagaatgtgcaagggtttgtcataaaggtcatgat
tgcaaactcaaacgaacgtcaccaacagcctattgtgattgttgggaaaaatgtaaatgt
aaaactctaattgctggacagaaatctgctcgtcttgatctactttatcgtctgctcact
gctactaatctggtcactctgccaaatagtaggggagagcatctcctgctatttctggtg
cagacggtggccaggcagacagtagagcattgtcagtataggccgcctcgaatcagggaa
gatcggaaccgaaaaacagctagtcctgaagattcagatatgcctgatcatgatttagag
cctccaaggtttgcccagcttgctttagagcgtgttctacaggactggaatgccttgaaa
tctatgatcatgtttgggtcacaggagaataaagaccctttgagtgccagtagtaggata
ggacatcttttgcccgaagagcaagtatacctaaatcagcaaagtggcactattcggctg
gactgtttcactcattgccttatcgtcaagtgcacagcagatattttgcttttagatact
ctactaggtacattagtgaaagaactccaaaacaaatacacacctgggcgccgagaagaa
gctatcactgtgacaatgaggtttctacgttctgtagcaagagtgtttgtcattcttagt
gtagaaatggcttcatccaaaaagaaaaacaactttattccacagcccattggaaaatgt
aagcgtgttttccaagcactgctaccttatgctgtagaagaattgtgcaatgtagctgaa
tcattgattgttcctgtcagaatggggatcgcccgcccaactgcaccatttactttggcc
agtactagcatagatgccatgcaaggcagtgaagaactgttttcagtagaaccactacct
ccacgaccatcatcagatcagtctagcagctccagtcaggctcagtcatcctacatcatc
cgcaatcctcagcagaggcgcatcagccagtcccagcctgttagaggtagagatgaagaa
caggatgacattgtttcagcagatgtggaagaggtggaggtggtggaaggtgtggctgga
gaagaagatcatcatgatgagcaggaagagcatggagaagagaatgctgaagccgaagga
cagcatgatgagcatgacgaagatggtagtgacatggagctggatttgttagctgctgct
gagacagaaagtgacagtgaaagtaaccatagcaaccaagataatgctagtgggcgcaga
agtgttgtcactgcagcaactgctggctctgaagcaggagcaagcagtgttcctgccttt
ttttctgaagatgattctcagtcaaatgactcaagtgattctgatagcagcagtagtcag
agtgacgacatagaacaggagacttttatgcttgatgaacctttagaaagaaccacaaat
agctcccatgccagtggtgctgcccaagctccccgttccatgcagtgggctgttcgcaac
acccagcatcagcgagctgccagcacagccccttccagcacatccacgccaacagctagt
tctgccggtttgatttatattgatccttcaaatttacgccggagtggtaccatcagtaca
agtgctgcagctgcagcagctgctttggaagctagcaatgccagcagctacttaacatct
gcaagcagtttagccagggcttacagcattgtcatcagacaaatctcggacttgatgggc
ctcattcctaagtataatcatctagtatactctcagattccagcagctgtgaaattgact
tatcaagatgcagtaaacttacagaactacgtagaagaaaagcttattcctacatggaac
tggatggtcagtattatggattctactgaagctcaattacgttacggttctgcattagca
tctgctggtgaccccggacatccaaaccatcctcttcatgcttctcagaattcagcccga
agagagagaatgactgcacgcgaagaggctagcttacgaacccttgaaggaagacgacgt
gccacattgcttagtgcccgtcaaggaatgatgtctgctcgaggagacttccttaattat
gctctttctttaatgcggtctcataatgacgagcattctgatgttcttccagttttggat
gtttgctcattgaagcatgtggcatatgtttttcaagcccttatatattggattaaagca
atgaatcagcaaacaacattggatactcctcagctagaacgcaaaaggacacgggaactt
ttggaactgggtattgataatgaagattcagaacatgaaaacgatgatgacaccaatcaa
agtgctactttgaatgataaggatgatgactctgttcctgcagaaactggccagaaccat
ccatttttccgacgttcagactctatgacgttccttgggtgtatacctccaaatccattt
gaagtgcctttggctgaagccatcccgttggctgatcaaccacacctgctacagccaaat
gctagaaaggaggacctttttggccgtccaagtcagggtctttattcctcatctgccagt
agtgggaagtgcttaatggaggttacaatggacagaaattgccttgaggttcttccaact
aaaatgtcttatgctgccaatctgaaaaatgtaatgaacatgcaaaatcgccaaaaaaag
gaaggagaagaacagaacatgcaggcagaagaagctgagaattcaaaaccaggcccatcg
gctcatgatcttgctgcacaactgaaaagtagtttactggcagaaataggtcttactgaa
agtgaaggaccacctctcacatctttcagaccgcagtgtagcttcatgggaatggttatt
tcccatgatatgttgctaggacgttggcgtctttctttggaattgtttggtagagtattc
atggaagatgttggagcggaaccaggatcaatcctaactgaattgggtggttttgaagta
aaagaatcaaaattccgtagagaaatggaaaaactgagaaaccagcagtcaagagactta
tcactagaggttgatcgagatcgagatcttctcattcagcagactatgaggcagcttaat
aatcattttggtcgaagatgtgccactacaccaatggctgtccacagagtaaaagtcaca
tttaaggatgaaccaggagagggcagtggtgtagcacgaagtttttatacagccattgca
caagcatttttgtccaatgaaaaattgccaaatctagattgtattcaaaatgccaacaaa
ggtacccacacaagtttaatgcagagattaaggaacagaggagagagagatcgggaacgg
gaaagagaaagggaaatgaggaggagtagtggcttgcgagcaggttctcgaagagaccgg
gatagagactttagaagacagctttccattgatacccggcccttccgacctgcctctgaa
gggaatcctagcgatgatcccgatcctctacccgcacatcggcaggcacttggagagagg
ctttatccccgtgtgcaagcaatgcagcctgcatttgcaagtaaaatcactggcatgttg
ttggaattatccccagctcagctgctactccttctagcaagtgaagattctctgagagca
agagtagacgaggccatggaactcatcattgcgcatggacgggaaaatggtgctgatagt
atcttggatcttggattattagactcctcagaaaaggtacaggaaaaccgaaagcgtcat
ggctctagtcgaagtgtagtagatatggatttagatgatacagatgatggtgatgacaat
gcccctttgttttaccaacctggaaaaagaggattttatactccgaggcctggcaaaaac
acagaagcaaggttgaactgttttaggaacattggcaggattcttggactatgtctgctg
caaaatgaactttgtcctattacattaaatagacatgtaattaaagtattgcttggaaga
aaagtcaactggcatgattttgctttttttgaccctgtgatgtatgagagtttgcgacag
ctaatccttgcttctcagagctcagatgctgatgctgttttctcagccatggatttggca
tttgcaattgacctgtgtaaagaagagggtggaggacaggtcgaactcattcctaacggt
gtgaatatcccagttactcctcagaatgtgtatgaatatgtgaggaaatatgccgagcac
aggatgttggtagtagcagaacagccattgcatgcaatgaggaaaggtctactagatgtg
cttccaaaaaattcattagaagatttaacagcagaagattttaggcttctggtaaatggc
tgtggtgaagttaatgtacaaatgctgatcagctttacatctttcaatgatgaatcagga
gaaaatgctgagaagctcttacagttcaagcgttggttctggtctatagtagagaagatg
agcatgacagaacgacaagatcttgtttacttttggacatcaagcccttcattaccagcc
agtgaagaaggatttcaacctatgccctcaatcacaataagaccaccagatgaccaacat
cttcccactgcaaatacttgtatttctcgcctttatgtcccactctactcctctaaacag
attctcaaacagaaattgctacttgccattaaaaccaagaattttggttttgtgtag
DBGET
integrated database retrieval system
