Dipodomys merriami (Merriam's kangaroo rat): 138806077
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Entry
138806077 CDS
T11079
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138806077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138806077
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138806077
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
138806077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF6276
Motif
Other DBs
NCBI-GeneID:
138806077
NCBI-ProteinID:
XP_069847709
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDSTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAARAARDVHTVLDRVVRQHVREAA
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggagctcctgtccgaccagggctaccgcgtggacggacgtcgcgcggga
gagctgcgcaagatccaggcgcggatgggcgtgtttgcgcaggcggacggctcggcctac
atcgagcagggcaacaccaaggcgctggcggtggtctacgggccgcacgagatccggggc
tcccgttcaagagccctgcctgaccgagccctggtgaactgtcagtatagttcagccacc
tttagcacaggggagcgaaagcgacgcccacatggggacagaaagtcctgcgagatgggg
ctgcagttacgtcagaccttcgaagcagctatccttacccagctgcacccacgttctcag
attgacatctatgtgcaggtgctgcaagcagatggtgggacctacgcagcttgcgtgaat
gcagccactctggcagtgatggatgcagggatacccatgagggactttgtgtgtgcgtgc
tcagcaggatttgtggacagcacagccctggcggacctcagccatgtggaagaagccgct
gggggtccccaactagccctggccctgctgccagcttcaggccagattgctctgcttgaa
atggatgcccggctgcatgaggatcacctggagcaggtgctagaggccgcggcccgggca
gcccgagacgtgcacacggtgctggatcgcgtagtccggcagcacgtacgcgaggccgct
atcttgttaggagactga
DBGET
integrated database retrieval system
