Dipodomys merriami (Merriam's kangaroo rat): 138806565
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Entry
138806565 CDS
T11079
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138806565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138806565
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138806565
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138806565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8
zf-RING_Vps41
zf-ANAPC11
zf-UDP
ZNF512_C2HC
PHD_NSD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
138806565
NCBI-ProteinID:
XP_069848089
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MHQFRQDTGTMRPVRRNFFEPSSAPGKGIVWEWEADGGAWTAYDMDVCITIQNAYEKRHP
WLDLSSLGFCYLIIFGSMSQMNRQTRRRRRLRRRLDLAYPLTVGAVPRSQSWPVGAGPGR
PCSCAQCLLVDCTRAASNAVLASQRRRAPPTPDAAAAARAPDAAARALRPSATFAGAALW
AAPAAAAAAAEPAPPANPPTPAPRAPPGAPDAAPAPGQNNLNRPGPQRAAAGSRAAIPPG
VPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPKPVLHPPPVSKSDVKPVPGV
PGVCRKTKKKHLKKSKNPEDVVRRYMQKVKNPPDEDCTICMERLVTASGYEGVLRHKGVR
PELVGRLGRCGHMYHLLCLVAMYSNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEFHLIPH
SLPGFADTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRHCYLPNNEKGRKVLRLLITA
WERRLIFTIGTSSTTGESDTVVWNEIHHKTEFGSNLTGHGYPDASYLDNVLAELTAQGVS
EASAKA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagttccggcaggacacgggcaccatgcgccccgtgcgccgcaacttcttcgag
ccgtcgtcggcgccgggcaagggcatcgtgtgggagtgggaggcggacggcggcgcgtgg
acggcctacgacatggacgtgtgcatcaccatccagaacgcctacgagaagcggcacccg
tggctcgacctgtcctcgctgggcttctgctacctcatcatcttcggcagcatgtcgcag
atgaaccggcagacgcgccgccgccgccgcctgcgccgccggctggacctggcctacccg
ctgacggtgggcgccgtgccgcgctcgcagtcctggccggtgggcgcgggccccggccgg
ccgtgctcgtgcgcgcagtgcctgctggtggactgcacgcgcgccgcctccaacgccgtg
ctggcctcgcagcgccgccgcgcgcccccgacgcccgacgccgccgccgccgcgcgcgcc
cccgacgccgccgcgcgcgccctgcgccccagcgccaccttcgcgggcgccgcgctctgg
gccgcgcccgccgccgccgccgccgcggccgagcccgcgccccccgccaacccgccaacg
ccggccccgcgcgcgccccccggcgcccccgacgccgcgcccgccccgggacagaacaac
ctcaaccggcccgggccccagcgcgccgccgccggctcgcgcgccgccatcccgcccggg
gtccccgcgctccccgtgaagaacctgaatggtactggacctgtgcacccggccctagca
ggcatgaccgggatcctgctgtgcgccgcggggctgcccgtgtgcctgacccgcgccccc
aaacccgtcctgcacccgccacccgtgagcaagagcgacgtgaagcccgtgcccggcgtg
cccggcgtgtgccgcaagaccaaaaagaagcacctcaagaaaagtaagaaccccgaggat
gtggtcagaagatacatgcagaaggtgaaaaacccgccggatgaggactgcaccatctgc
atggagcggctggtcacggcatcgggctacgagggcgtgctgcggcacaagggggtgcgg
ccggagctcgtgggccgcctgggccgctgcggccacatgtaccacctgctgtgcctcgtg
gccatgtactccaatggaaataaggacggcagcctgcaatgccccacctgcaaggccatc
tatggggagaagacggggacccagccccccgggaagatggagttccacctcatcccacac
tcgctacctggcttcgcggacacgcagaccatccgcatcgtctacgacatccccacgggc
atccagggacctgagcaccccaacccgggaaagaagttcaccgccagaggcttcccacgc
cactgctatctgcccaacaacgagaagggccggaaggtgctgagactgctgatcacagcc
tgggagcgcaggctcatcttcaccatcggcacttccagcaccaccggagagtcagacacc
gtggtgtggaacgagatccaccacaagaccgagttcgggtccaacctcacgggccacggc
tacccggatgccagctacctggacaacgtgctggccgagctcactgcccagggcgtatcc
gaggcttcggccaaggcctga
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