Dipodomys merriami (Merriam's kangaroo rat): 138807045
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Entry
138807045 CDS
T11079
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138807045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138807045
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138807045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_BBS7
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
PQQ_2
DUF1513
Frtz
Motif
Other DBs
NCBI-GeneID:
138807045
NCBI-ProteinID:
XP_069848723
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MGEFKVHRVRFFNYVPPGIRCVAYNNKSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAGGQRLFSAGLNGEILEYDLQALNIKYAVDAFGGPIWSMTASPSGSQLLVGC
EDGSVKLFEITPDKIQFERNFDRQKSRILCLSWHPAGTHVAAGSIDYISVFDFKSGSTVR
KMIVDRQHLGVTKPKCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTLVKSHVIANADVQ
SIAVAEQEDSFVVGTAEGTIFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKLEVKNYDAALRKITFPHRRLISCSKKRQLLLFQFAHHLELWRL
GSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGGWIAYSTVSRFFLYRLKY
ERDNISLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHVIQLLEASFKHLHSFQPQ
SGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNLKNLELHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQIFEYSIPDKQYTEWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTVFYNPLPPTNESDVFRRRTVHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagttcgtttctttaattatgttccacctgggatccgc
tgtgtagcttacaataacaaatcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgggctacagaagctctgtgttgggcaggaggacagcgactctttagtgctggactcaat
ggagaaattcttgagtatgatttacaggcattaaacatcaaatatgctgtggatgctttt
ggaggacctatttggagtatgactgccagccccagtggctctcagcttttggttggctgt
gaagatggatctgtgaaactatttgaaatcacaccagacaaaatccaatttgaaagaaat
tttgatcgtcagaaaagtcgcatcctgtgtctcagttggcatcctgctggtacccatgtt
gcagctggctccatagactacatcagtgtgtttgatttcaaatcagggagcactgttcgg
aagatgattgtagataggcaacacctgggtgtgactaagccgaagtgtattgtgtggggc
gtggccttcttgtctgatggcactgtcataagtgtggattcagttgggaaagtacagtta
tgggactctgctactgggacccttgtcaagagtcacgtcattgcgaatgctgatgtgcag
tccattgctgttgctgaacaagaagacagtttcgtggtgggcacagccgagggcacgata
ttccattttcaactggtctctgtgacttccaacagcagtgagaagcaatgggtgcggacc
aaaccattccagcaccacactcacgacgtacgcaccgtggcccacagcccaacggccctg
atatctggaggcactgacacacacttggtaattcgtcctctcatggaaaagttagaagtt
aagaattatgatgctgctctccgaaaaatcacctttccccatcgacgtctcatttcctgt
tctaaaaagagacagcttctcctcttccagtttgctcatcatttggaactttggcgacta
ggatctaccgttgcaacaggcaaaaatggagacacccttccactttccaaaaatgcagat
catttattgcacctcaagacaaagggccctgagaacattatttgcagttgcatctcccca
tgtggaggttggatagcctattcaaccgtatctcgttttttcctctatcggttgaaatat
gaacgtgacaacataagtctccaaagggtttcaaaaatgccagcattccttagatctgct
cttcagattttgttttctgaagattcaacaaagctctttgtggcatcaaatcaaggatct
ctgcatgtcattcaactgttggaagcaagctttaagcacctgcatagtttccagcctcaa
tcagggactgtagaggccatgtgtcttttggcagttagtccagatgggaattggctagct
gcatcaggtaccagtgctggagtccatgtgtacaatctgaagaatctagagcttcactgc
acagtgcctgcctacaattttccagtaactgccctagccattgcccccaataccaacaat
cttgttattgctcattctgaccaacagatatttgagtacagcatcccagacaaacagtac
acagaatggagccgaactgtccagaagcaggggtttcaccacctgtggctccagagggat
actcccatcacacacatcagttttcatcccaagagaccaatgcacatcctcctccatgat
gcctacatgttctgcatcattgacaagtcgttgcctctgccaaatgataaaactgtgttc
tacaatcctcttcctcccacgaatgaatcagatgtattccggaggcgcacagtccatgcc
tttaaaatttctaagatatataagcccttactcttcatggatcttctggatgaaaggaca
cttgtggcagtagaacggcccctggatgacatcattgctcagctcccaccacctatcaaa
aagaagaaatttggaacttag
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