KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138807190
Entry
138807190         CDS       T11079                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dmer01009]
    138807190
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmer03036]
    138807190
Enzymes [BR:dmer01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     138807190
Protein phosphatases and associated proteins [BR:dmer01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     138807190
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    138807190
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_5 PHD_JHD1 PHD_2 PHD_Pygo
Other DBs
NCBI-GeneID: 138807190
NCBI-ProteinID: XP_069848862
LinkDB
Position
Unknown
AA seq 1690 aa
MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSNLKIPVVERKILDLYAL
SKIVASEGGFEMVTKEKKWSNVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPTLEMKEKVEPEVLCPDTQTSPESGARMNILPKRTRRVKSQSDSGDVNKNTELKKLQ
IFGAGPKVVGLAMGAKDKEDEVTRRRKVTNRSDAFNMHMRQRKGTLSVNFVDLYVCMFCG
RGNNEDRLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMFPEEEEYALSGWNLNNTPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLKRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPADLCPCPMQKKCLRYRY
PLEELPSLLCGVGARAQSYDTWVSRVTEALSDNLSHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQKAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDAMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
LCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALHKAREWTAKVEALQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTVAGRPEEVRFCICRKTASGFMLQCELCKDWFHNSCVPLPKPSSHKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLSSFQQSA
FNRVVSSVSSSPRQTVDYDDEETDSDEDIRETYGYDIKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKMKGKD
SSEKKRKRKLEKAEQLFGEGKQKSKETKKMDKPKKKKLKLNTEKSKELNKLAKKLAKEEE
RKKKKEKAATAKVELVKENTEKKREKKVLDIPSKYDWSGAEESDDENAVCASQSCQRPCK
DKVDWVQCDGGCDQWFHQVCAGVSPEMAESEDYICINCAKKPGPDSPGHAAPPAFIMSYK
LPMEDLNEAS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgggcgtcgggcccgggggctacgcggccgagttcgtgccgcccccggagtgcccg
gtcttcgagcccagctgggaggagttcaccgacccgctcagcttcatcggccgcatccgg
cctctggccgagaagaccggcatctgcaaaatccggccgcccaaggattggcagcctccg
tttgcatgtgaagtaaaatccttccgttttactcctcgagtccagcgactgaatgaactt
gaggcaatgaccagagtgagactggatttcttggatcaactggcaaaattttgggaactt
caaggatctaatttaaagatacctgtggtggaaagaaaaatcctagacctctatgcattg
agcaagatcgttgccagtgaaggaggatttgaaatggtcaccaaggagaagaaatggtct
aacgttgggagccgcttgggatatttaccaggaaaaggaactggatctcttctgaagtcc
cactatgaaagaattctctacccctatgagctattccagtctggtgtcagccttatgggt
gtgcagatgcctactttagaaatgaaggagaaagtggaacctgaggtcctctgccctgat
actcagacttccccagagtcgggagcaagaatgaacatcctgccaaaaagaacaagacgt
gtcaagtcccagtcagactctggagatgtgaataaaaacacagaactgaagaaactccag
atttttggagctggacccaaagttgtgggtctagcaatgggagcaaaagataaagaagat
gaggtcacccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcacatgaga
caacggaaaggaactctgtctgttaactttgttgatctctacgtgtgcatgttttgtggt
cggggcaacaacgaggacaggctgctgttgtgtgacggatgtgacgacagctatcacacg
ttctgtctcattccgccgctgcccgatgtgcccaagggagattggaggtgtcctaagtgc
gttgctgaggagtgcaacaaaccccgagaagcttttggatttgaacaagctgtacgagaa
tacacgcttcagagttttggggagatggcagataacttcaagtctgattatttcaatatg
ccagtccatatggtgcccacagagctagtggagaaggagttctggaggctggtgagcagc
atcgaggaagatgttattgtagagtacggtgccgacatctcctccaaggacttcggaagc
gggtttcccgtcaaggatggtcggaggaagatgttcccagaggaagaggaatatgcgctt
tcgggctggaatttgaacaacacgcccgtcctggagcagtccgttctcgcgcacattaat
gtggacatttctggcatgaaggtgccttggctctatgtgggcatgtgtttctcttctttc
tgctggcacattgaagatcactggagctactccattaactacttgcactggggtgagcca
aagacgtggtatggagtaccgtctcatgctgcagaacagctggaggaagtgatgagggag
ctggcccctgagctgtttgaatcccagcctgacctcctgcatcagctagtcaccatcatg
aaccccaatgtgctgatggagcatggggtgcctgtgtacaggaccaatcagtgtgctggc
gagtttgtagtgacatttcctcgcgcctaccactctggattcaaccagggctacaacttt
gcggaggctgtgaacttctgcactgctgactggctgcccattggtcgtcagtgtgtaaat
cattaccgaaggctgaagcgccactgtgtcttctctcatgaggaactcattttcaaaatg
gcagcagatccagaatgcctggatgtggggctggccgctatggtctgcaaagagttgact
ctcatgactgaagaagaaacgcgattaagggagtccgttgttcagatgggagttctgatg
tcagaagaggaagtgtttgagcttgttcctgacgatgagcgacagtgctctgcatgcaga
accacgtgcttcctttcggctctcacctgctcctgtaatcccgagcggctggtgtgtctc
taccacccagctgatctgtgcccctgccccatgcagaagaaatgtcttagataccgctac
cccctggaagagctcccttccctcctgtgcggtgtgggggcccgggcacagtcctacgac
acttgggtcagtcgcgtcacagaggcgctgtccgataacctcagccacaagaaagatttg
attgaattaagagtaatgcttgaagatgctgaggacaggaaatacccagagaacgatctc
tttcgaaaactcagggatgctgttaaagaagccgagacctgtgcttctgtggctcagctg
ctgcttagcaagaagcagaaacatagacagagcccagatagtgggagaacgcggaccaaa
ctgaccgtagaagaactgaaggcctttgtccagcagcttttcagtcttccatgtgtcatc
agccaagctcgacaagtgaagaatctgctagatgatgtggaagagtttcatgaacgtgct
cagaaggccatgatggatgaaacgccagattcttccaaactccagatgctgatagacatg
ggttctagtctctatgtggagcttcctgaattaccccggctgaaacaagagctccagcag
gctcggtggctggatgaagtgaggctgaccctgtccgatcctcagcaggtcactttggat
gccatgaagaaactgattgactctggtgtaggactggcaccccaccatgctgtggagaaa
gcaatggctgaactacaggagctccttacagtctctgaacgatgggaagaaaaggctaag
ctttgcctgcaggccagaccacggcacagtgtagcaagtttagaaagcattgtgaatgaa
gccaagaacattccagcttttcttccgaacgtgttgtccctgaaagaggccctacacaag
gctcgagaatggacagcaaaggtggaagctcttcagagtggcagcaattatgcttacttg
gagcagcttgagagcttatctgccaagggacgccccatccctgtgcggcttgatgccctg
ccccaggtggagtcgcaggtcgcggcagcacgggcttggagagagcggactgggcgcacc
tttctgaagaagaattccagccatacgctgctgcaggtgctaagtccccgaactgacatt
ggtatatacgggagtggtaaaaacaggaggaaaaaagtgaaagaattaatagaaaaagaa
aaagagaaggacctagacctcgagcccttgagtgatttggaggaaggactggaggaaaca
agagatacagccatggtggtggcagttttcaaggaacgagagcaaaaagagattgaggcc
atgcactccctccgggcagccaacctagccaagatgacggtggcgggccgcccagaggaa
gtcaggttttgcatttgccggaagacagccagtgggtttatgctgcagtgcgagctctgc
aaggactggttccacaacagctgtgttccccttcccaagccaagttcccacaagaaaggc
tccagttggcaggccaaagaagtcaaattcctgtgccctctttgcatgaggtctcgcagg
cccaggctagagactattttgtcactcctggtgtcccttcagaagctgcctgtacggttg
cctgagggagaagccctgcagtgtttgacggaacgtgctatgagctggcaagacagagca
cggcaggccctggccacagatgaactgtcctctgctttggccaaactgtctgtgctaagc
cagcgtatggtggagcaggccgctcgggaaaagaccgagaagatcatcagcgcagaactc
caaaaagcagctgccaacccggacttacagggacacttgtctagttttcaacagtcagct
tttaaccgggtggtgagcagtgtatcatcttctccccggcaaacagtggactacgacgat
gaggagacagattctgacgaagacattagagagacttatggctatgacataaaggataca
gccagtgtgaagtcctctagtagtctggagcccaatcttttttgtgatgaagagattccc
atcaagtctgaggaagtggtgacacacatgtggactgcgccttcgttctgtgcggagcat
gcgtattcttctgcttccaagagctgctcacaaggttcgagcaccccaagaaagcaacct
cggaagagccccttagttccccgaagtttggaacctccagtgttggagctgtcaccggga
gcgaaagcccagttggaagaactcatgatggtcggagaccttctggaagtgtctctagat
gagacacaacacatatggcggattttgcaggccacacacccaccctcagaagacagattc
ttgcatatcatggaggatgacagcatggaagagaaaccattaaaaatgaaaggaaaggac
tcctcagagaagaaacggaaacgaaagctggaaaaggcagagcagctttttggagaagga
aaacagaagtctaaggagacaaagaaaatggacaaacctaaaaagaagaaattaaaatta
aacacagagaaatcaaaggagctgaataaactagccaagaagctagcaaaagaagaagag
agaaagaaaaagaaagaaaaggctgccacagccaaagttgaacttgtgaaggagaatacg
gagaagaagagggagaagaaagtgctggacatcccttccaagtacgactggtccggggcg
gaggagtctgacgacgagaacgccgtgtgtgcttcccagagctgccagaggccctgtaag
gacaaggtggactgggtgcagtgtgacggtggctgtgaccagtggtttcatcaggtgtgt
gctggggtgtctccagaaatggcagagagcgaagattacatctgtataaactgtgcgaag
aagccggggccggacagcccgggccacgcggcacctcccgccttcatcatgagctacaaa
ttaccaatggaggacctgaacgaggccagttag

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