Dipodomys merriami (Merriam's kangaroo rat): 138807346
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Entry
138807346 CDS
T11079
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138807346 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138807346 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138807346 (Nup85)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138807346 (Nup85)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138807346 (Nup85)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138807346 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_19
Motif
Other DBs
NCBI-GeneID:
138807346
NCBI-ProteinID:
XP_069849143
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MEELDGEPTITLIPGMNSKKKQMCFDWGPGEMLVCETTFDKKEKSETVPNCPFIHIVRKD
VDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGHRYSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDTL
SADVLGSENPSKHESFWNLVTILVLQGRLDEARQMLSKEADANPPSAGMCRILGELMRTM
PVLSPGNTQTLTELELKWQHWCEECERHLQDGTFAANPHLECLCKIMLGDEATLLEQKEL
LSNWYHFLVTRLLYSHPTVKPIDLHFYAQSSLDMFLGGESSSEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLA
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSVRAKDAAFATLVSDRFLKDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLTSGKLECAEFDAHRLQDDDIETTKVEMLRLALARNLARAIVREGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttgacggcgagcccaccatcaccttgattccaggtatgaattctaagaag
aagcaaatgtgttttgactggggtcctggggaaatgctggtgtgtgaaaccaccttcgac
aaaaaagaaaaatcagaaacagtgccaaactgcccctttatccatattgttcggaaagat
gtagatgtttactctcaaattttgagaaaactcttcaatgaatcacatggaatctttgtg
ggactccagagaattgaagaagaattgactggaaaatctaggaaagctcaattggttcgt
gtgagtaaaaactaccgatcagtcattagagcatgtatggaagaaatgcaccaggttgca
attgctgctaaagatccagccagtggccaccggtatagcagtcaggtctccattttgtct
gcaatggaacttatttggaatctgtgtgagattctttttattgaagtagctccagctggg
cctcttcttcttcacctccttgactgggttcgactccatgtgtgcgaggtggacacgttg
tcggcagatgttttgggcagtgagaatccgagcaaacatgagagcttctggaacttggtg
accatcttggtgctgcagggccggctggatgaggcccgacagatgctgtccaaagaggct
gacgctaaccccccctctgcaggcatgtgccgcatcctaggggaactgatgaggacaatg
cccgttctcagtcctggcaatacccagacgctgacagagctggagctgaagtggcagcac
tggtgtgaggagtgtgagcggcacctgcaggatggcacgttcgctgccaatccccatcta
gagtgtctctgcaagatcatgctgggggatgaggccaccttgctggagcagaaggagctg
ctgagtaactggtatcacttcctggtgacccgcctgctctactcccaccccacggtgaaa
cccatcgacctgcacttctatgcacagtccagcctggacatgtttctgggaggggagagc
agctcagaacccttggacaacattttgatggcagccttcgagtttgatatccaccaagtg
atcaaggagtgcagcattgctctgagcaactggtggttcgtggctcacctgacagacctg
ctggatcactgtaaactcctccagtcacacaacctctactttggttccaacatgagagag
tttctcctgctggaatatgcttcgggactcttcgctcaccacagcctgtggcagctggcg
gtggattactttgactattgccctgagctggggcgagtttccttggagctccacattgag
aggatccccctcaacacggagcagaaagccctcaaggtacttcgaatttgtgagcagcgg
cagatgactgaacaagtgcgcagcatctgcaagatcttagccatgaaggctgttcgcaat
aatcgcctgggctctgcactctcctggagcgtccgtgccaaagatgctgcctttgccaca
ctcgtgtcagacaggttcctcaaggattactgtgagcgaggctgcttttctgacttggac
ctcattgacaacctagggccagccatgatgctcagtgatagactgacatttctgggaaag
taccgggagttccaccggctgtatggggagaagcggtttggtgacgctgcttctcttctg
ctctctctcatgacttctcaaattgcacctcgctccttctggatgactctgcttacagac
gccctgccccttttggaacagaaacaggtgattttttcagcagaacagacttacgagctg
atgcgatgtctggaggatttgacttcagggaagctggagtgtgcagagtttgatgctcat
cgactccaggatgacgacatagagaccaccaaggtggagatgctgagactggctcttgcc
cggaaccttgcccgggcaattgtgagagaaggctcgttagaaggctcctga
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