Dipodomys merriami (Merriam's kangaroo rat): 138807412
Help
Entry
138807412 CDS
T11079
Name
(RefSeq) ABC-type organic anion transporter ABCA8-like
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138807412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmer02000
]
138807412
Transporters [BR:
dmer02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
138807412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
MMR_HSR1
AAA_22
AAA_16
AAA_23
AAA_25
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
138807412
NCBI-ProteinID:
XP_069849261
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MGNREIRVCQQTWALLHKNILKKWRMKRETLMEWMNAFLLLLLLYIYPNNHQVNDFSSLN
SMDLGRVDSFSGPRFTIAYTPLTNTTQQIMKKVASTSFMTGREVFGMPDEESIKEVTANY
HEEIARVIFTDTYSYHLKFMLGKRIPVRKEHRDHTAHCVEINEDIDCQLSIFWKEGFVAL
QAAINAAIIEVTTNHSVMEELMSVTGKFMVVHPFIGQGGVTTDFFILFCIIAFSPFSYYA
SVNVTRERKKMKGLMKMMGLRDLAFWLSWGLLYAGFIFIMALCLALVIKSIQFFIMTDFM
IVFTLFLLYGLSTIALAFLMSVLVKKSFLTGQLVFLLTIFWGSLGFTALYRYLPVSLEWI
LSIFSPFAFMLGMSQMLHLDYDLNSNASPDPSSSNLIIATNFMLAFDTFLYLALTMYFEK
VLPNEYGHRYPPLFFLKSSFWSPEQKPEHMTLDNVVDSDSSLNDSFEPVSPEFHGKEGIR
IRNVTKEYKGKPDKIEALKDLALDIYEGQITAILGHSGAGKSTLLNVLSGLSVPTKGSVT
IYNKELSDAAELENILQMVGVCPQSNVQFDFLTVRENLRLFAKIRGILPPEVDKEVNRIL
LELEMKNIQDVLAQNLSGGQKRKLSFGIAILEDPRIFLLDEPTAGLDPISRHRVWNLLKE
RKADRVILFSTQFMDEADILADRKVFLSKGKLKCAGSSLFLKKKWGIGYHLSLQLKEICA
RENITSLVKQHIPNAKLSAENEGKLVYTLPLETTCRFPELYKDLDNSPGLGIENYGVSMT
TLNEVFLKLEGKSAVDELDTDIWGDTQVERAGDTERLMEMEHILSSLREMRKMTSGVALW
AYQICAIAKVRLLKLKHEKKALLSLLLILAAGFCPLLLEYILIKIYQNSYTWELSPHLYF
HAPGQPPQAPLTQLLIINKTGASIDDFLHSVEQQNIALEVDKSGTGNGVDDPSYNGAIIV
SGNEKDYRFSLVCNTKRLNCFPVLMDIVSNGLLGMFAPSARIQTDRSTFPGKLQSNPFEY
LGHTTFWLILASSCPPYIAMSSIDDYKSKTWSQLRISGLFPSAYWFGQACVDIPLYCFIF
IFMYLMDFALSFQETLFTVVNRIIQIPCSIGYVLSLIFFTYVISFIFRKGRKNSGIWSFC
FFVITMLSVAGFLFENYENIPLYCITFLIPPTTLIGCLFISLDLIMLSVFGEGSRRTDPF
LVLLIPLLHFFIFLFILRCLEWKFGKKSMRKDPFFRISPRSSDALQNPEQPEGEDEDVQM
ERMRTTNSLNSTNFDETPVIIASCLRKEYARKRKHCFSKRKNKIATRNISFCVRKGEILG
LLGHNGAGKSTSIKVITGDMKPTAGQVLLKGSSEGDPLGFLGYCPQENVLWPNLTVREHL
EVFAAVKGLSKGDKEITITRLVDALKLQDHLKAPVKTLSEGVKRKLCFALSILGNPSVLL
LDEPSTGMDPEGQQQMWQAIRATIRNTEGAALLTTHYMAEAEAVCDRVAIMVSGRLRCIG
SIQHLKSKFGKDYLLEMKVKTPAQGEPLHEEILKLFPQAARQDRYSTLMVYKLPVEDVQP
LAQAFFKLEKVKQNFDLEDYSLSQSTLEQVFLELSKEQELDGFDEELDLSVKWKLLPQEE
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacagagagatacgcgtgtgtcagcaaacgtgggcattgttacacaagaacatc
cttaaaaaatggagaatgaaaagagaaaccttaatggaatggatgaatgctttcctcctc
ctgcttttgttgtacatatatcctaacaatcatcaagttaatgatttttcttccctgaat
tctatggacttgggaagagtagattcatttagtggacccagatttacaattgcctacact
cctcttaccaatacaacccaacagatcatgaagaaagttgcctctacctctttcatgaca
ggcagagaagtttttggaatgcctgatgaagaaagtattaaagaagtaacagcaaattac
catgaggaaatagcaagagtcatttttactgatacatactcctatcatctgaaattcatg
ttagggaaaagaatcccagtaaggaaagaacacagagaccacacagctcattgtgtcgaa
ataaatgaagatattgactgtcaactttcaatattctggaaggaaggttttgtggctctt
caagctgccattaatgctgctattattgaagtcacaaccaatcattctgtgatggaggaa
ctgatgtcagtcactgggaagttcatggtggtacatcccttcatcggtcaaggaggagtt
acaactgacttcttcatcctcttctgcattattgccttctccccattcagttattatgca
tctgtcaatgttacaagagagaggaaaaagatgaagggtttgatgaaaatgatgggcctt
cgagatttggccttctggctgtcctggggtttgctctatgccggtttcatcttcattatg
gccctttgcttggcacttgtgatcaaatctatccagttttttatcatgaccgacttcatg
atagtcttcaccctctttcttctttatggattgtccacgatagcgctggctttcttgatg
agcgtcttggtaaagaagtctttcctcaccggccagcttgtgttccttctcaccatcttt
tgggggagcttggggttcaccgcattatacagataccttcctgtatccttggagtggatt
ctaagcatttttagtcccttcgccttcatgcttgggatgtcccagatgttacacttggat
tatgatttgaattctaatgcatctcctgacccaagcagctcaaatctcatcatagccaca
aacttcatgctggcatttgatacattcctctacctggcattgacgatgtactttgagaag
gttttgccaaatgaatatggacatcgatatccacccttgtttttcctgaagtcctcattt
tggtcaccagaacaaaagcctgaacacatgacactggacaatgtggtagattctgattcc
tcactgaatgactcttttgaaccagtgtctccagaattccatgggaaagagggcatcaga
atcagaaatgttaccaaagaatataaaggaaaacctgataaaatagaagccttgaaagac
ctggcactggacatctacgaaggtcagatcaccgcaattcttggtcacagtggtgctgga
aaatcaacactgttgaatgtgctcagcggcctgtctgttcccaccaaaggttctgtgacc
atctacaacaaggaactctcagacgcagctgaactggaaaacatcctccagatggtggga
gtgtgtccccagtccaatgtgcagtttgacttccttactgtgagagagaacctcaggctc
tttgctaaaattagaggtattctgccaccagaagtggataaggaggtaaacagaattttg
ctggaattggaaatgaaaaatatccaggatgtcctggctcagaacttgagtggaggacag
aagagaaagctgagctttgggattgccatcttagaagatccgcggattttcctactggat
gaacccaccgccgggctggatcccatttcaaggcaccgagtctggaatcttctgaaggaa
cggaaagcagaccgagtgatcctcttcagtacccagttcatggatgaggctgacatcctg
gctgataggaaagtgttcctctcgaaagggaagctgaagtgtgcaggatcttccttgttt
ttgaagaagaagtggggcattggatatcacttaagtttgcagttgaaggaaatatgtgct
cgggaaaacattacatctcttgttaaacagcacatccccaatgccaagttatcagcagaa
aatgaaggaaagctggtctatacgttacccttagaaacaacctgtaggtttccagaactg
tacaaggatcttgacaactctcctggcctgggaattgagaattatggggtatccatgaca
actctgaatgaagtgttcctgaaactagaaggaaaatctgcagttgatgaactggatact
gacatttggggagacacacaagttgaaagagctggggacacagaaaggcttatggagatg
gaacacatcctctcttccctgagggagatgagaaagatgaccagcggtgtggctctctgg
gcatatcaaatctgtgccattgcaaaagttcgcttgctgaagttgaagcatgagaagaaa
gctcttctttccttgctattgattctggcagctggattttgtcctcttcttttggaatat
atcttgataaaaatatatcaaaacagttacacctgggaactttcccctcatttgtacttc
catgctccgggacaaccaccccaggcacctcttacccaattgctgatcatcaataaaaca
ggggcaagcattgatgacttcctccattctgtggagcagcagaacatcgccctggaggtg
gacaaatcaggaactggaaatggcgtggacgatccctcctacaatggtgccatcatagtg
tctggcaatgaaaaggattatagattttccttagtatgcaataccaagagactgaattgc
ttcccagttcttatggatattgtgagcaatgggctgcttgggatgtttgctccatcggca
cgtatccagacggacaggagcacattcccagggaaattacagagcaatccgtttgaatac
ctgggacataccacattctggctgattttggcatccagttgtcctccttatattgccatg
agcagcatcgatgattataagagcaagacttggtcccagctacggatctcaggcctcttc
ccttccgcttactggttcgggcaggcgtgtgtggacattcctctgtactgcttcatcttc
atttttatgtatttaatggacttcgctttaagcttccaggagactctattcacagttgta
aatcgtattattcaaatcccatgctccattggttatgtcctgtctctcatcttcttcact
tatgtgatttcattcatattccgcaagggaagaaaaaacagtggcatttggtcattttgc
ttctttgtcatcaccatgttatctgtggctggatttttattcgaaaactatgaaaatatt
ccactatactgcatcacgtttttaataccaccgaccacactgatcggttgtttgttcatt
tctcttgatcttatcatgttatctgtctttggtgaaggatcaaggcgcacagatccattt
ctggtattgctaattcctttacttcacttttttatttttctttttattctccgatgtctg
gaatggaagtttggaaagaaatcaatgagaaaggaccccttctttagaatttctccaaga
agcagtgatgcacttcaaaatccagaacagcccgaaggggaagatgaagatgttcagatg
gaaagaatgagaaccaccaactctttgaattctaccaattttgatgagacaccagtcatt
attgccagctgtctacgcaaggaatatgccaggaaaaggaagcattgcttttctaagagg
aaaaacaagatagccaccagaaatatctccttctgtgttcggaaaggtgagattttaggg
ttgttaggacacaatggggctggtaaaagcacatccatcaaggtgataactggggacatg
aagccaactgctggccaggtgctgctgaaagggagcagcgaaggggacccgctggggttc
ctggggtactgcccacaggagaatgtgctgtggcccaacctgacagtgagggaacacctg
gaggtgtttgcagctgtgaagggactgagcaaaggtgacaaggaaatcaccatcacacgg
ctggtggacgcgctcaagctgcaggaccacctgaaggcccccgtgaagaccttatcagag
ggagtgaagagaaagctgtgctttgcgctgagcatcctgggaaacccgtcggtgctgctt
ctggatgagccatccacaggcatggaccccgaggggcagcagcaaatgtggcaggcgatc
cgagccaccattcgaaacacagagggggccgccctcctgaccacccattacatggcggag
gccgaggctgtgtgtgatcgtgtcgccatcatggtgtctggaaggctgaggtgtattggt
tccatccagcacctaaaaagcaaatttggcaaagactacctgctggagatgaaggtgaag
acccccgcacagggtgaacccctccatgaggaaatcctgaagcttttcccccaggctgct
cgccaagaccgatactctactctgatggtttataagttgccagtagaagatgtgcagcct
ttagcccaagctttcttcaagttagaaaaggttaaacagaactttgatctggaggattat
agtctatcacagtccaccctggagcaggtctttctagagctttccaaggaacaggagctg
gatggttttgatgaggaactggatctctcggtgaaatggaagctcctcccccaggaagag
ccttaa
DBGET
integrated database retrieval system
