Dipodomys merriami (Merriam's kangaroo rat): 138807671
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Entry
138807671 CDS
T11079
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like
KO
K14793
ribosomal RNA-processing protein 9
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138807671
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
90S particles
Other 90S particles
138807671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR19_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
138807671
NCBI-ProteinID:
XP_069849539
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSAAAAARKRGRSGSGVGAAAGAGKRRRKAESAGDRGKAKAKGGGRMNEEISSDSETESL
APKRTEEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEAREFEEDQVAGRLKEDVL
EQRGRLQKCVAREIQTPDPAAIRVLRGHQLSITCLVVTPDDSAIFSAAKDCTIIKWSVES
GRKLHVIPRAKKGTEGQPTGHSTHVLCMAISSDGKYLASGDRSKLIFIWEAQSCRHLYTF
TGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECC
VTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCVHLINEEHMVSGADDGSVALWGLSKKRP
LALQREAHGIRGEPGLEQPYWVSSVTALLNTDLVATGSHDSRVRLWQCGEGFRRLDHVCD
IPLVGFINSLKFSSTGDFLVAGVGQEHRLGRWWRLKEARNSVCIIPLRRTSVPPAAGS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcggctgcagctcggaagcggggacggtcgggctcgggggtgggggccgct
gcgggggccggcaaacggcggagaaaggccgagtctgccggggaccggggcaaagccaag
gccaagggtggcggcaggatgaatgaagagatctccagcgactccgagaccgagagcctg
gctccgaagaggacagaggaggaggaggaggaggaggagctggaggagaccgcacaggag
aagaagctgcgcttggccaaactctaccttgaacagctcaggcagcaagaggaggagaag
gccgaggcccgggagtttgaggaggaccaggtggctgggcgtctgaaggaggatgtgctt
gaacagagaggaagactgcagaagtgcgtggcacgggagatccagaccccagaccctgct
gccattcgagtgctgcgaggtcaccagctctccattacgtgtttggtggttacccctgat
gactcggccatcttctctgctgccaaagactgcaccatcattaagtggagcgtggagagt
ggacggaagttgcacgtgatacctcgagccaagaagggtacagaagggcagccaactggg
cacagtacccatgtcctgtgtatggccatctcctccgatggcaagtacctggcttctggt
gaccgcagcaaactcatcttcatttgggaggcccagagctgtcgtcacctgtataccttc
acagggcaccgggacgctgtgtcgggtctggcgttccgcaggggcacccaccagctctac
agcacgtcccacgaccgctcggtgaaggtgtggaatgtggccgagaactcctacgtggag
acgctcttcgggcaccaggatgccgtggccgcactggacgccttgagccgggaatgctgc
gtgaccgccgggggccgggatgggaccgtgcgcgtgtggaagatccccgaagagtcgcaa
ctcgtcttttatggccaccagggctccatcgactgtgtccacctgatcaacgaggagcat
atggtgtcgggcgctgatgatggctctgtggccctgtggggtctctccaagaagcggccg
ctcgccctgcagcgggaagctcacgggatacggggtgagcctgggctggagcagccctac
tgggtgtcttcagtgactgcgctgctcaacacagacctcgtagctacaggctcccatgac
tcccgtgtgcgtctttggcagtgcggggaaggcttccggcgattggaccacgtgtgtgac
atcccattggtgggctttatcaacagcctcaagttttccagcactggggactttttggtg
gctggagtgggccaggaacacaggcttggccgatggtggcgactcaaagaagcccggaac
tcagtgtgcatcatccccctccgcaggacctccgtgcccccagccgccggctcctga
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