Dipodomys merriami (Merriam's kangaroo rat): 138808036
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Entry
138808036 CDS
T11079
Symbol
Slit3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
138808036 (Slit3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138808036 (Slit3)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Axon guidance molecules
138808036 (Slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
hEGF
Laminin_G_2
LRR_9
Laminin_G_1
LRRNT
LRRCT
EGF_TEN
LRR_14
LRR_EndoS
EGF_Teneurin
JAG1-like_EGF2
LRR_NXF1-5
EGF_DL_JAG
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
138808036
NCBI-ProteinID:
XP_069850101
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MESAGARRPPRAPAAAAAAATAAPRSPGAPAPSPRSPGAAPPRARPGSPRPPAARPAAPR
GPGGARLRLRGAAGDARGPRAGPAEGAPGPARLSAAPGPAPRAPPPPRAPRPAPGPAPRA
MASAPPGARAALRARLALALALASVLSARPAAACPAKCTCAAASVDCHGLGLRAVPRGVP
RLAERLDLDRNNITRITKTDFAGLKNLRVLHLEENQVSVIERGAFQDLKQLERLRLNKNK
LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGMADVKNLQLDNNQISCIEDGAFRAL
RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNNLYCDCHLAWLSDWLRQRRTVGQFT
LCMAPVHLRGFNVADIQKKEYVCPGPPAEAPSCSASSLSCPSACTCSNNVVDCRGKGLTE
IPAHLPEGVVEIRLEQNAIKSVPAGAFTQYKKLKRIDMSKNQISDIAPDAFQGLRSLTSL
VLYGNKITDIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLHLLSLYDNKLQTISK
GLFAPLQSIQTLHLAQNPFVCDCHVRWLAEYLQDNPVETSGARCASPRRLANKRISQVKS
KKFRCSGSEDYRSRLSSQCFMDLVCPEKCRCEGTVVDCASQKLSRVPAHLPEYVTDLRLN
DNEISVLEATGVFKKLPNLRKINLSNNKIREVREGAFEGAAAVQELVLTGNQLQAVHGRA
FHGLSGLKTLMLRSNLISCVGNDTFAGLSSVRLLSLYDNRIATIAPGAFTTLVSLSTINL
LSNPFNCNCHLAWLGRWLRQRRVVSGNPRCQRPSFLREIPIQDVASQDFTCEGNEESSCQ
PSPRCPEPCTCVDTVVRCSHKGLRGLPAGMPRDVTELYLEGNHLTTVPRELATLRHLTLI
DLSNNSISVLTNYTFSNMTHLSTLILSYNRLRCVPVHAFHGLRSLRVLTLHGNDISSVPE
GSFNDLTSLSHLALGTNPLHCDCSLAWLSEWVKAGYKEPGIARCSSPESMADRLLLTTPT
HRFQCRGPADVSIAAKCNACLSGPCKSNGTCRPDPVEHFRCACPPSHKGKDCAVPVNPCA
QDPCQHGGTCHLSEVHREGFSCSCPLGFEGHRCEVNPDDCEDNDCENNATCVDGINNYAC
VCPPNYTGELCDEVINHCVPGMNPCQHEAKCVSLDKGFRCDCVPGYSGKLCETDDDDCVA
HKCRHGAQCVDAVDGYSCLCPQGFSGLRCEHPPPMVLLQTSPCDQHECENGAQCIVVQQE
PTCRCPSGFAGPRCEKLITVNFLGKDSYVELATAKVRPQANISLQVATDKDNGILLYKGD
NDPLALELYQGHVRLVYDSLSAPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPK
SLGKLQKGPAVGANSALYLGGIPTSTGLSALRQGAERPRDGFHGCIHEVRINNELQDFKA
LPPQAPGVSPGCKSCSVCRHGLCRALDGDSVLCECHPGWAGPLCDQEARDPCQRHSCLHG
QCVAAGRSYVCKCAEGYGGPLCDRKNSSASACSALTCHHGQCHVSSHGEPRCLCQPGFSG
ERCQQESPCVGEVVREAVRRQRGQVWCATASRVPMLECRGRCGRRCCGPVRSKRRKYVFQ
CPDGASFVEEVERHLECGCRPCS
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcgggcgcccgccggccgccccgagcccccgccgccgccgccgccgccgcc
accgccgcgccccggagccccggagccccggccccgagcccgcgctccccgggcgccgcg
ccgccccgcgcccgccccggctccccgcgcccgcccgcggcccggccggcggccccgcgg
ggccccgggggcgcccggctccggctgcggggcgcggcgggcgatgcgcgcggcccccgc
gccggccccgccgagggcgccccgggccccgcgcgcctgagcgcagcgcccggcccggcc
ccgcgcgccccgccgccgccgcgcgccccgcgccccgcgcccggcccggccccgcgcgcc
atggcctccgcgccgcccggggcccgcgccgccctgcgcgcccgcctggcgctggccctg
gcgctggcgagcgtcctgagcgcgcggcccgccgccgcctgcccggccaagtgtacctgc
gccgcggccagcgtggactgccacggcctgggcctgcgggccgtgccccgcggcgtgccc
cgcctcgccgagcgcctggacctggacagaaataacatcaccaggatcaccaagacagac
ttcgctggactcaagaacctccgagtcttgcatctggaggaaaaccaggtcagcgtcatc
gagagaggcgccttccaggacctgaagcagctggagcgactgcgcttgaataagaataag
ctccaggttcttccagaattactcttccagagcacaccgaagctcaccagactagacctg
agtgagaaccagatccagggcattccccggaaggcgttcaggggcatggcggacgtgaag
aacctgcaactggacaacaaccagatcagctgcatcgaggacggagccttccgagcactg
cgtgacctggagatcctaaccctcaacaacaacaacatcagccgcatcctggtcaccagc
ttcaaccacatgcccaagatccggactctgcgcctgcactccaacaacctctactgcgac
tgtcacctggcctggctttccgattggctgcgccagcgcaggacggtaggccagttcaca
ctctgcatggctcccgtgcacctgcgaggcttcaacgtggcggacatccagaagaaggag
tacgtgtgtccaggtccccccgcggaggctccgtcctgcagcgccagctccctctcctgc
ccgtccgcctgcacctgcagcaacaacgtggtggactgtcgaggcaaaggcttgaccgag
atccccgcccacctgcccgaaggcgtcgtggaaatacggctggaacagaacgccatcaag
tcggtcccggcgggagccttcacccagtacaagaagctgaagcgcatagacatgagcaag
aaccagatctccgacatcgctcccgacgccttccagggcctgagatccctcacctcgctc
gtgctctacgggaacaagatcaccgacatcgccaaggggctgttcgacgggctcgtgtcc
ctgcagctgctcctcctcaacgccaacaagatcaactgcctgcgggtgaacaccttccag
gatctgcagagtctccacctgctctcgctgtacgacaacaagctgcagaccatcagcaag
gggctgtttgcgccgctgcagtccatccagacgctccacttagcgcagaacccattcgtg
tgtgactgccacgtgcggtggctggcggagtacctgcaggacaaccccgtggagaccagc
ggtgcgcgctgcgccagcccccgccgtctggccaacaagcgcatcagccaggtcaagagc
aagaagttccgctgctcaggctccgaggattaccgcagccggctcagcagccagtgcttc
atggacctggtgtgccccgaaaagtgtcgctgcgagggtacggtggtggactgcgccagc
cagaagctgtcccgggtccccgctcacctccctgaatacgtcaccgacctgcggctcaac
gacaacgagatctctgttctagaagccaccggcgtcttcaagaagctgcccaacctccgg
aagataaacctgagcaacaacaagatccgggaggtgcgagagggtgccttcgagggagcg
gcggccgtgcaggagctggtgctgaccgggaaccagctgcaggccgtgcacgggcgggcc
ttccacgggctcagcggcctcaagaccctgatgctgcggagcaacctgatcagttgcgtg
ggcaacgacacgtttgccggcctgagctccgtgcggctgctctcgctctatgacaaccgc
attgccaccatcgcccccggagccttcaccacgctggtctccctgtccaccataaacctg
ctgtccaaccccttcaactgcaactgccacctggcctggctgggccgctggctgaggcag
cggcgcgtggtcagtgggaacccacggtgccagaggccctccttcctcagggagatcccc
atccaggacgtggcctcccaggacttcacctgcgaaggcaacgaggagagcagctgccag
cccagcccgcgctgcccggagccgtgcacgtgcgtggacaccgtggttcggtgcagccac
aaggggctccgcggcctccccgccggcatgcccagggacgtgacggagctgtacctggaa
ggaaaccacttgaccacggtgcccagggagctggccactctccgccacctgacactcatc
gacctgagcaacaacagcatcagcgtgctgaccaactacaccttcagcaacatgacccac
ctgtccaccctcatcctgagctacaaccggctgaggtgcgtccccgtccatgccttccac
gggctgcgctccctccgagtgctgacccttcacggcaacgacatctccagcgtccccgaa
ggctccttcaacgacctgacgtccctgtcccacctggcgctgggaacaaaccctctgcac
tgtgactgcagcctggcctggctctcggagtgggtgaaggccggatacaaagagcccggc
atcgcccgctgcagcagccccgagtccatggccgaccgactcctgctcaccacgcccacc
caccgcttccagtgcagggggccagcagacgtcagcatcgcggccaagtgtaacgcctgc
ctctcgggcccgtgcaagagcaacggcacgtgccgcccggaccccgtggagcatttccgc
tgcgcctgcccccccagccacaagggcaaggactgcgccgtgcccgtcaacccctgtgcc
caggacccctgccagcacggcggcacctgccacctcagcgaggtccaccgggaagggttc
agctgctcctgtcccctgggttttgaggggcatcggtgcgaggtcaacccggacgactgt
gaggacaatgactgcgagaacaacgccacctgcgtggacggcatcaacaactacgcgtgc
gtgtgcccgcccaactacacgggcgagctgtgtgacgaggtgatcaaccactgcgtgccc
gggatgaacccgtgccagcacgaggccaagtgcgtgtccctggacaaggggttccggtgc
gactgtgtgcccggctacagcgggaaactctgcgagacggacgacgacgactgtgtggct
cacaagtgccggcacggggcccagtgtgtggacgcggtggacggttactcctgcctgtgc
ccccagggcttcagcgggctgcggtgcgagcaccccccgcccatggtcctgctgcagacc
agcccctgcgaccagcacgagtgcgagaacggcgcccagtgcatcgtggtgcagcaggag
cccacctgccgctgcccgtccggcttcgcgggcccccgctgcgagaagctcatcaccgtc
aacttcctgggcaaggactcctacgtggagctggccaccgccaaggtccggccccaggcc
aacatctccctgcaggtggccaccgataaggacaatgggatcctcctctacaagggcgac
aatgacccgctggccctggagctgtaccagggccacgtgaggctggtgtacgacagcctg
agcgccccgcccaccacggtgtacagcgtggagacggtgaacgacgggcagttccacagc
gtggagctggtgatgctgaaccagaccctgaacctggtggtggacaagggcgcccccaag
agcctggggaagctgcagaaggggccggcggtgggcgccaacagcgccctctacctggga
ggcatccccacctccacggggctgtcggccctgcgccagggcgcggagcggccgcgcgac
ggcttccacggctgcatccacgaggtgcgcatcaacaacgagctgcaggacttcaaggcg
ctcccgccgcaggcccccggcgtctcccccggctgcaagtcctgctccgtgtgccgccac
ggcctgtgccgcgcgctggacggcgacagcgtgctgtgcgagtgccacccgggctgggcc
ggcccgctgtgcgaccaggaggcccgcgacccctgccagcgccacagctgcctccatggc
cagtgtgtggccgctggccgctcctacgtgtgcaagtgcgcggagggctacggggggcct
ctgtgtgaccgcaagaacagctcggccagcgcctgctctgcgctcacctgccaccacggg
cagtgccacgtctccagccacggggagccgcgctgcttgtgccagcccggcttcagcggg
gagcgctgccagcaggagagcccgtgtgtgggcgaggtggtccgcgaggcggtgcggcgg
cagcggggccaggtgtggtgcgccacggcgtcccgggtgccgatgctggagtgccggggc
cgctgcgggcgccgctgctgcgggccggtgcgcagcaagcggcgcaagtacgtgttccag
tgcccggacggcgcgtccttcgtggaggaggtggagagacacctggagtgcggctgccgg
ccctgctcctga
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