Dipodomys merriami (Merriam's kangaroo rat): 138808202
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Entry
138808202 CDS
T11079
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03440
Homologous recombination
dmer03450
Non-homologous end-joining
dmer04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138808202
03450 Non-homologous end-joining
138808202
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
138808202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmer03032
]
138808202
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138808202
DNA replication proteins [BR:
dmer03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
138808202
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
138808202
BRCA1-C complex
138808202
NHEJ (non-homologous end-joining)
MRX complex
138808202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_21
DUF2703
Motif
Other DBs
NCBI-GeneID:
138808202
NCBI-ProteinID:
XP_069850285
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MVMKLEPRATPLLGRCSTTEDTPPSPVFLSCIQVFFQKPFCFTCHDQDSGARVCSLMEEI
KVKTIIECLKYISTGDFPPGTKGNTFIHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSM
LCSQKSKKTEFKTLEGIITRTKHGERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQE
DSNWPLSEGKMLKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKA
CEIRDRITTKEAQLASSKEIVRSYENDLEPLKDRLKDIEDNLAKVMKLDNEIKALDSRKK
QMEKDNNELEQKMEKVFQGSDEQLNELYYNHQKTVRDKERKLIDCQRELEKLNKESRLLN
QEKSELLVEQGRLQLQADRHQEHIRSRDSLIQTLATQLELDGFERGPFSERQIKNFQKLV
RERQEKEAETASQLMNDLAEKETQKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELKNV
KYELQQLEGSSDRILELDQELTKTERELSKAEKDSNVETLKTEVISLQNEKADLDRTLRK
LDQEMEQLNHHTTTRTQMEMLSKDKADKDEQIRKIKSRHSDELTALLGYFPNKKQLEDWL
HSKSKEINQTRNRLAKLNKELASAEQNKNHISNELKRKEEKLGSYEDKMFDVCGSQDFES
DLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQDVISD
LQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIPELRNRLQNVNRD
IQRLKNDIEEQETLLGTIIPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGID
LDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSMTNELKSEKLQIATN
LQRRQQLEEQTVELSTEVQSLHREIKDAKEQINPLETTLEKFQQEKEEIINKKYSSNKTA
QDKLNDIKEKVKNINGYMKDIENYIQDGKDNYKEQKETELNKVIAQLSECDKHKEKISKE
MGTMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKRHLKEMGQMQVLQMRKEHQQL
EDNIDSIKRNHSLALGRQKGYEEEIIHFKKELRDPQFRDAEEKYREMMIVMRTTELVNKD
LDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRR
NYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRE
NIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRINKNIDQCSEIV
TCSVSSLGSYVH
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaagcttgaaccacgggccacacccttgctaggcaggtgctctaccactgaa
gacacacctccatccccagtttttctttcttgtattcaagtattcttccagaagccattc
tgcttcacctgccatgaccaggattcaggtgccagagtttgcagcctcatggaggaaatc
aaggtcaagaccatcattgaatgtctaaaatatatttctactggagacttccctcctgga
actaaaggaaatacattcattcatgatcccaaggttgctcaagaaacagatgtaagagcc
cagatccgtctgcagtttcgtgacgtgaatggagaacttgtagctgtgcagagatctatg
ttgtgcagtcaaaaaagcaagaagacagaatttaaaactctggaaggaatcattacgaga
acaaagcatggagaaagggtcagtcttagctctaaatgtgcagaaattgatcgagaaatg
atcagttcacttggcgtttccaaatctgttctaaataatgtcattttctgtcaccaagaa
gattcaaattggcctttaagtgaaggaaagatgctgaagcagaagtttgatgagatcttt
tcagccactaggtacattaaagctttagatacacttcgtcaagtccgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaattgaaatatctgaaacaaaataaggaaaaagct
tgtgagattcgtgatcggattactactaaagaagcccagttagcatcttcaaaggaaatt
gtcaggtcgtatgagaatgatcttgaaccattgaaggatcgtctaaaagacattgaagat
aatcttgctaaagtaatgaaacttgacaatgaaattaaggccttggatagtcgaaaaaag
caaatggagaaagataacaatgaactggaacagaaaatggaaaaggtttttcaaggaagt
gatgagcaactgaatgagttatattacaatcatcagaaaacagtaagggataaagaaagg
aaattaatagactgccaacgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctgcaagcagatcgccat
caagaacacatacgatctagagattcattaattcagactttggcaacacagctagaattg
gatggctttgagcgtgggccgttcagtgaacgacagattaaaaattttcagaaacttgtg
agagagagacaagaaaaggaagcagaaactgccagccaactgatgaatgacttggcagaa
aaagaaactcagaagcaaaaacagatagatgaaatacgggataagaaaactggactggga
agaataattgagctaaaatcagaaatcttaagcaagaagcaaaatgaactgaaaaatgtg
aagtacgaactacagcagttggaaggatcttcagacaggattcttgaactggaccaggaa
ctcacaaaaactgaacgtgaactaagcaaggctgagaaagacagcaatgtagaaacccta
aaaacagaagtcataagccttcaaaatgagaaggcagacctagacaggaccttgcgtaaa
ctggaccaggagatggagcagttaaatcatcatacaactactcgcacccagatggagatg
ctgtccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaactgcactgttggggtattttcctaacaaaaaacaacttgaagactggctt
catagtaaatcaaaggaaattaatcagaccaggaacagacttgccaaattgaacaaggaa
ctagcatcagctgagcaaaataaaaatcatataagtaatgaactaaaaagaaaagaagag
aagttgggcagttatgaagacaagatgtttgatgtttgtggtagccaagattttgaaagt
gatttagacaggcttaaagaggaaattgaaaaatcctccaaacagcgagccatgctggct
ggagccacagcagtttattcccagttcattactcagctgacagatgaaaaccagtcctgc
tgccctgtctgtcagagagtttttcagacagaggctgaactacaagatgtcattagtgat
ttgcagtctaagttgcgacttgctccagataaactcaagtcaacggaatcagaactaaag
aagaaagaacggcgtcgtgatgaaatgctggggcttgtgcccatgaggcagagcataatt
gatttgaaggagaaggaaataccagaattaagaaacagacttcagaatgtcaatagagac
atacagcgcctaaagaatgatatagaagagcaagaaactcttttgggtacaataatacct
gaagaagaaagtgctaaagtatgtttaacagatgttacaatcatggagaggttccagatg
gaactaaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggaatagac
ttggatcgaactgttcaacaagtaaaccaagaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcgtaaactcatacaggaccagcaagaacaaatt
caacacctaaaaagtatgacaaatgagcttaagtcagaaaaacttcagatagccactaat
ttacaacgtcgtcagcaactggaagagcagacggtggaattatccactgaagttcaatct
ttacacagagaaatcaaggatgcaaaggaacagataaaccctttagaaaccacattggaa
aaattccagcaagaaaaagaagaaataatcaacaaaaaatattccagcaataaaacagca
caggacaaactgaatgatatcaaagagaaggttaaaaatattaatggttatatgaaagac
attgaaaattacattcaagatggaaaagataactataaggagcaaaaagaaactgaactt
aataaggtaatagctcaactaagtgaatgtgacaaacacaaagaaaagataagtaaagaa
atgggaacaatgaggcaagacattgatacacagaagatacaagaaaggtggctacaagat
aaccttaccctaagaaaaagaaatgaggaactgaaagaggttgaagaagaaagaaaacga
catttgaaggaaatgggtcaaatgcaagtcctgcagatgagaaaggaacatcagcagttg
gaagataacatagacagtataaaaagaaaccacagtttggccttagggcgacagaaaggt
tatgaagaagaaattattcattttaagaaagaacttcgagatcctcaatttcgggatgct
gaggagaagtatcgagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatctattataaaactcttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaattatacgtgatctttggcgaagtacctaccgaggacaagacatt
gaatacatagaaattcggtcagatgctgatgaaaatgtgtcagcttctgataaaaggcgg
aattacaactacagagtcgtgatgctaaagggagacacagctttggatatgcgaggacga
tgcagtgctggacaaaaggtattggcctcgctcatcatccgcctagcactggcagagaca
ttctgcctgaattgtggcatcctagccctggatgaaccaacaacaaatcttgacagagag
aacattgaatcccttgcgcatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtcatcactcacgatgaagattttgtggagctcttgggacgttct
gagtacgtggagaaattctacaggattaataagaatattgatcagtgctcagagattgtg
acatgcagtgttagctccctgggctcttatgttcattaa
DBGET
integrated database retrieval system
