Dipodomys merriami (Merriam's kangaroo rat): 138808211
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Entry
138808211 CDS
T11079
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138808211 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138808211 (Taf5)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138808211 (Taf5)
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138808211 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
138808211 (Taf5)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138808211 (Taf5)
STAGA complex
138808211 (Taf5)
TFTC complex
138808211 (Taf5)
SAGA complex
138808211 (Taf5)
SLIK complex
138808211 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
138808211
NCBI-ProteinID:
XP_069850303
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGSGAPNNGPNGGGGHVAAAAAAAGG
DGGTPKPVVAVSAATPAGAAPVPGAAAESGSPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAAAGSGAPGEVDGAGAEAASSLLSRVTASAPGSAGPDPPGTGASGVTVVSGSAS
GPAASGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagaacccgagggtccg
ccgacgctgctgcctcctcaggcgggcgatggcgcgggcgagggcggcagcggcgctccc
aacaacggccccaacggcggcggcgggcatgtagcggcggcggcggcggcggccggcggg
gatggcgggacccccaagcccgtggtggccgtgtccgccgctactccagcgggggcggcc
ccggtgcccggcgccgcggcggagtcgggctctcctcacgaccggcagacgctgctggcg
gtgctgcagttcctccggcagagcaacctccgggaggccgaggaggcgctgcggcgtgag
gcccggctgctggaggaggcagcggcgggctccggagccccgggagaggtggacggggcc
ggcgccgaggcggcaagctcgctcctcagccgggtcacggcctcggcccccggctccgcg
ggccccgatcctccgggcaccggcgcttcgggagtcacggtcgtctcgggttcagcctca
ggtcccgccgcgtcggggaaagttggaagtgtagctgtggaagaccagccagatgtcagt
gctgtcttgtcggcctacaaccaacaaggagaccccacaatgtatgaagagtactatagt
ggactgaaacacttcattgaatgttctctggactgccatcgggcagaattatcccaactc
ttttatcctctgtttgtacacatgtacttggagctagtctataatcaacatgaaaatgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgaaaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggcttgttaaaagaa
ccagaaattgaagtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcccaaaaaagatagtattggatccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaattcctcttcctgagctgaaagattcagataaattggat
aagatcatgaatatgaaagaaaccaccaaacgagtgcgacttgggccggactgcttacct
tctatttgtttctatacattcctaaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtg
acacccaaaaagcttcgtagtgttaaacaagcatcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtcccgataggaattacctgcta
tcctcttcagaggatggaactgttagattatggagccttcaaacatttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccatatggatattat
tttgtgtcagggggccatgaccgagttgctcgactctgggccacagaccactatcagcct
ttaaggatatttgctggccatcttgctgatgtgaattgtacaagattccatcccaattca
aattatgtggctacgggctctgcagacagaactgtgcggctctgggatgttttgaatggt
aactgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtactgctttgggatattgga
catggtttgatggttggagaattaaaaggccatactgatacagtgtgttcacttagattt
agtagagatggtgaaattttggcctcaggttcaatggataatacggtccggttatgggat
gccataaaagcatttgaagatttagagactgatgactttactacagccactggccatata
aatttacctgagaattcacaggagttattattgggtacatatatgaccaaatcaacacca
gttgtacacctccattttactcgaagaaacttggttctggctgcaggagcttatagtccg
caataa
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integrated database retrieval system
