Dipodomys merriami (Merriam's kangaroo rat): 138808352
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Entry
138808352 CDS
T11079
Symbol
Depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
138808352 (Depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138808352 (Depdc5)
Membrane trafficking [BR:
dmer04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
138808352 (Depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
138808352
NCBI-ProteinID:
XP_069850566
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEINRA
SIQQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQTEGFPQGENST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSIPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESDNALPIQVDYEAYDAQVFRLPGPSRAQRLTT
CRSVRERENHHRKSISSCDVSSSPSLQSRAMPTEEVRSQASDDSSLGKSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGLYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPAHSSAELLE
LAYHEAAGRHSTTRQPGDGMSFLNFSATEELSVSLLSNSGAGMNPRTQNKDSLEDNVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKAQKSNPAVPPPLSSSPLYSRGL
VSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRIT
EGEVHCDIYGDRPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGTTMKGLQMPGP
ISTHSLESTAPTVVKKGTSALSALLEMEASQKCLGEQQAAAHGGKSATQPVENSSVAMTP
TYVDSPRKDGAFFMEFVRSPRTASSAFYPQASLDQTVAPVLDGTSLGVSASQSVDRGSSQ
TYGSSQNLGEQAFPSGNPSDSSSQQQATSCLTSSSTLVEILEAMKHSSTGVQLLSEQKGL
SPCCFVSAEGVHWLMNNVEGVQTQAMAIDIMQKMLEEQLITHASGEAWRTFIYGFYFYKI
VMDREPDRVAMQQPTATWHTAGVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRP
ASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSL
NAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLF
IPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKP
QYIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRS
SATGDEKFADRLLKDFTDFCINRDNRLVLFWTSCLEKMHASAP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccacaaaggtttacaaacttgtcatccacaagaagggcttcggaggaagtgat
gatgagctagttgtgaatcccaaagtatttcctcacatcaagcttggagacattgtggag
attgctcaccccaatgatgagtacagccctctgcttttgcaagtcaagtcccttaaggaa
gatttacagaaagaaactatcagtgtggaccagactgtgacccaagtatttcggcttaga
ccttatcaagatgtctatgtgaatgttgtggaccccaaggatgtgacccttgacctagtg
gaattaacttttaaggatcaatatattggccgaggggatatgtggcgactaaagaaaagt
ttggtgagcacgtgtgcttatatcactcagaaggtagaatttgctggtatcagggcacag
gctggtgagctgtgggtaaagaatgagaaggtcatgtgtggttatatcagtgaagatacc
agggtggtgttccgttctacgtcagctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatctgtattttgagaaagctgtgaatggtttcctt
gctgatttgtttactaagtggaaggagaagaactgtagtcatgaagtaacagtggtcctg
ttttctcgaactttctatgatgcaaaatcaattgatgaatttcctgagataaaccgagcc
tcaattcaacaagatcacaaagggcgattctatgaagacttctacaaagtggtggtacag
aatgagagaagggaagaatggacttcactcctcgtgaccattaaaaagcttttcatccag
tatccagtgttggtgcgactggaacagacagagggctttcctcaaggagaaaattctacc
tcagcccaaggaaactacctggaggccatcaacctttcctttaatgtgtttgacaagcat
tacatcaaccgtaactttgaccgaactgggcagatgtctgtggtgatcacaccaggagtg
ggtgtctttgaagtggaccgcctacttatgatcttgaccaagcagcggatgatagataat
gggattggtgtagatttggtgtgtatgggagaacaaccattacatgctgtgccattgttc
aagttacacaatcggagcattcctcgggattctcgcctgggtgatgactataatattcct
cactggataaaccacagtttctacacatcaaaaagccagctcttttgtaacagtttcacc
ccacgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acatctcttgggactccgaaagaatctgataatgcccttcccatccaagtagattatgag
gcctatgatgctcaagtgttcaggcttcctggcccatcccgtgctcagcgcctcaccacc
tgcaggtctgtgcgggagcgagagaatcatcaccggaaaagcatcagctcctgtgacgtc
tcatctagcccttccctgcagagtcgtgcaatgcccacagaggaagtgaggagtcaggct
tctgatgacagctccctgggcaagagtgccaacatcttgatgattccacatcctcacctg
caccagtatgaagtcagcagctccttgggctacaccagcacccgagatgtcctagagaac
atgatggagccaccgcagcgcgactccagtgcaccagggaggttccacgtgggcagtgca
gagtccatgcttcatgttcgacctggtctttacacaccccagcgagcactgattaaccct
tttgccccctcacgaatgcccatgaagctcacatctaacagaaggcgctggatgcacacg
tttcctgtgggaccatccggagaggccatccagattcatcatcagacccggcagaatatg
gcggagctgcagggcagcgggcagagggacccagctcactcctctgcagagctgttggag
ttagcatatcatgaagctgctggaaggcacagcactacccgccagcctggtgacggcatg
tccttcttgaacttcagtgcaacggaagagctttctgtcagcctgcttagcaacagtggt
gcaggtatgaatcctaggacccagaataaggactctctagaggacaatgtttctacctct
ccagacccaattctgacactgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggagtggactggaagtctcttactactccggcgtgcctccccctcaccaccgactacttc
cctgaccgccagggcctgcagaatgactacacggagggctgctatgatctcctcccagaa
gcagacatggacaggagggatgaggaaggtgtgcagatgacagcccaacaggtgtttgaa
gagttcatttgccagcggctgatgcagggctaccaaatcatagtgcaacccaaggcccag
aaatccaacccagctgtcccgcctcccctgagtagtagtccactctatagtcgaggcctt
gtgtcccgaaaccgccccgaagaggaagaccagtattggctgagtatgggcagaactttc
cacaaagtgacattgaaggacaagatgatcacagtgactcggtaccttcccaaataccct
tatgaatctgcccagatccactacacatacagtctgtgtccttctcattcagactcagag
ttcgtctcctgttgggtggaattctcccatgagcgactagaggagtacaagtggaattac
ttagatcagtatatttgttctgccggctctgaagatttcagcttaatcgagtctctgaag
ttctggagaacccgcttcctgctcctgccagcctgtgtgactgctaccaaacgcatcaca
gaaggggaggtccactgcgacatctacggagacaggccgcgtgcagatgaggatgagtgg
cagctcctggatggcttcatccgctttgtggagggcttgaaccggatccgcaggcgccac
cgctcagaccgcatgatgcggaaagggaccaccatgaaaggcttgcagatgcctgggccc
atttccacgcactcccttgagtcaacagcccccacagttgtgaagaagggaacctcagct
ctgtctgccctgttggagatggaggccagtcagaagtgcctaggagaacagcaggcagct
gctcatggtgggaagagtgccacccagccagtggagaacagcagcgttgccatgactccc
acctacgtggacagcccacgaaaggatggggccttctttatggagtttgtccgcagccca
cgcacagcatcgtccgccttctaccctcaggcatcgctggaccaaacagttgctccagtg
ttggatggcaccagtttgggggtaagcgcaagccaatctgtggacagaggaagcagccag
acctatgggagttcccagaacttaggagaacaggccttcccctctggaaatcccagtgac
agcagctctcagcagcaggcgacaagctgtttaacgtcatcttccactctggtggagatc
ctggaagccatgaagcactcctcgacaggagtccagctgctctctgaacagaaaggcctc
tcaccgtgctgcttcgtcagtgctgagggggtgcattggctgatgaacaatgtggagggg
gtgcagacacaggcgatggccattgacatcatgcagaaaatgttggaagagcaactcatc
acacatgcatctggtgaagcctggcgtaccttcatctatggcttctatttctacaagata
gtgatggaccgagagccagaccgagtggccatgcagcagcccactgccacctggcacacg
gcaggggtggacgacttcgccagcttccagcgcaaatggtttgaagtggcctttgtggca
gaagagctcttgcactcggagattcctgccttcctcttgccttggctccccagccggcca
gcctcctatgctagcagacacagctccttcagccgcagttttggaggacgtagccaggca
gctgcacttttagctgccactgtcccagagcagaggactgtgaccctggatgttgacgtg
aacaaccgcacggaccggctggagtggtgcagctgctattaccatggcaacttctctctg
aatgcagcctttgagatcaagctgcactggatggcagtgactgctgcagtgctctttgag
atggtccaaggttggcatcgaaaagctacctcctgtggcttcttgttagtccccgtttta
gagggtcctttcgcgctgcccagttacctgtatggcgatccccttcgagcccagctcttc
atcccactcaacatcagctgcctgctcaaggaaggcagcgagcatctgtttgacagcttt
gaaccagaaacatattgggatcgcatgcacctcttccaggaagccattgcccacaggttt
gggtttgtacaagataaatattccgcctctgcttttaacttccctgctgaaaacaagcct
cagtacatccacgtgacaggcacagtgttcctgcagctaccctactccaagcgcaagttc
tccgggcagcagcgccgccggcgaaactccaccagctccaccaaccagaacatgttctgt
gaggagagggtgggctacaactgggcctataataccatgctgaccaagacatggcgctcc
agcgccactggggacgagaagtttgctgatcggctgctgaaagacttcacggacttctgc
atcaaccgggacaaccggctggtcctgttctggacgagttgtctggagaagatgcacgct
agcgccccatga
DBGET
integrated database retrieval system
