Dipodomys merriami (Merriam's kangaroo rat): 138808441
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Entry
138808441 CDS
T11079
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138808441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138808441
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138808441
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
HECT type E3
138808441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
138808441
NCBI-ProteinID:
XP_069850780
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAAVEIQAHVRSFLCRRSLHRDIRREIDEF
FKADDSGFSKRSALCIFKTARKLLFIFRIKEDNERFEKLCRCILSSMDAESEPKVWYVSL
ALSKDLTLLWIKQIKDILWYCCQFLEQLKPEILQDSRLITLYLTMLVTFTDTSTWKILRG
KGESLRPAMNHICANIMGHLNQRGFYSVLQVLLTRGLARPRPCLSKATLTAVFSLALRPV
TAAQFSDNLLRPFLIHIVSVPALVTHLGTVTPERLTVLESHDMLRKFIVFLRDEERCRDV
CETLEGCHTLCLTGNLLQLGSLNPRVLEEETDGFVSLLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMYLITKQLQFLWGVPLIRIFFNDILSRKLLEHPEPAPAQPASP
QNVLPMKSLLKRAFQKSASVRNILRPVGGRRVDSAEVQKVCNICVLYQTSLTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFLECLNNDTGESKQLLSMLMLFCDCSRHLI
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGETLELFQSVHGWLMV
LYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRKRAQLILQHIPHVIPHKNRVLLFRNM
VTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDV
ADLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKREPGGRLPTSSTCFNLLKLPNYSKKSALRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagtatctcagacctcacgagcgtggttcatcgatagagcccggcaggcccga
gaagagcggctggtgcagaaggagcgggagcgtgcggctgtggagattcaggcccacgtg
cgcagtttcttgtgtcggagaagcctgcacagagatattaggagagagattgatgagttt
tttaaagcagatgactctggattcagtaaaagaagtgcactttgtatttttaagactgcc
agaaaactgctgttcatattcagaatcaaagaagataatgagcggttcgagaagttgtgt
cgctgcatcctcagcagcatggatgctgagagtgagcctaaggtatggtacgtgtccctg
gctctctccaaagacctcactctcctgtggattaaacagatcaaggacattctgtggtac
tgctgtcaatttcttgagcagctcaagcctgaaatcctacaagactccagactcatcacc
ctgtacctcacgatgctcgtcaccttcacagacacttcaacatggaaaattctccggggc
aaaggtgagagccttcgaccagccatgaaccacatttgtgcaaatataatgggacatctg
aaccagcgtggattttattctgtgctgcaggtgttgttaacccgaggcctagccagaccc
cggccttgtctgtccaaagccactttaacagcagtcttttctctagcactgcgccctgtg
actgctgcacaattttcagacaatctgctccggccctttctcattcatatcgtgtcggtg
cctgccctcgtgactcatcttggcacagtgaccccagagcgcctcactgtcttagaatct
catgacatgctacggaaattcatcgtgttcttaagagatgaagagcgatgccgggacgtg
tgtgagactttagaaggctgccacacactctgtctgactggcaacctcctacagctgggc
tccctcaaccccagagtgttagaagaggaaacagacgggtttgtgagcctgctcacccag
atgctgtgctactgtcagaagtatgtgtcccagaagaagtccaacctgacccactggcat
ccggtccttggctggttctcccagtctgtggactatggcctcaatgagtccatgtacttg
atcaccaaacagctgcagttcctgtggggggtgcccctcatccgcatcttcttcaatgac
atcctcagcaggaagctactggaacacccagagccagcccccgcccagccggcgtccccc
cagaacgtgctccccatgaagagtctcctcaagcgtgcatttcagaagtctgcgtcggtt
cggaatattctaaggccagtagggggcagacgtgtagactctgcggaggtgcagaaagtg
tgcaacatctgtgtcctctaccagacctccctgaccacgctcacccagatccgcctgcag
atcctcacaggtctcacttaccttgatgacctgctgcccaaactgtgggcatttatctgt
gagctggggccccatggagggttaaagctcttcttggaatgcctgaacaacgacaccgga
gagtccaagcagctcttgtccatgctgatgctgttctgtgattgttcccgacacctcatc
acgatccttgatgacattgaagtttatgaagaacaaatttccttcaaactggaagagctg
gtcaccatctcctcttttctgaattcctttgtgtttaagatgatctgggatggaatcgta
gagaatgccaagggtgagaccttggagctgttccagtctgtccacgggtggctgatggtg
ctgtatgagcgggactgccggcggcgctttgcccctgaagaccattggctgcgaaaggat
ctcaagcccagcgtgctcttccaggaactcgacaaagaccggaaacgggcacagctcatc
ctacagcatatccctcatgtcattccacataaaaacagagttctcttgttccgaaacatg
gttaccaaggagaaggagaagctggggcttgtggaaacgagctctgcctcccctcacgtc
actcatatcaccatccgaaggtcccggatgttggaggacggctatgaacagcttcggcag
ctttcccagcacgccatgaagggcgtgatccgtgtgaagtttgtcaatgaccttggtgta
gacgaggctggaatcgaccaggatggcgtgttcaaggagttcttggaggaaattatcaag
agggtgttcgacccagcactcaacctgttcaagacaaccagtggggatgagcggctgtac
ccctcccccacatcctacatccacgagaattacctgcagctcttcgagttcgtggggaag
atgctggggaaggctgtgtatgaggggattgtggtggacgtgcccttcgcttccttcttc
ctgagccagctgctcgggcaccaccacagcatcttctacagctccgtggatgaacttcct
tctcttgactcggagttctataaaaacctcacctccattaagcgctacgatggggacgtc
gcagaccttggcctcacgctgtcgtatgacgaggatgtcatgggtcagcttgtctgccac
gaactgattcctggagggaagaccattcctgttacaaatgaaaacaaaattagctacatc
cacctgatggcacactttcgaatgcacactcaaatcaaaaaccagacggctgccctcatc
agcgggttccgttccatcatcaagcctgagtggatccgaatgttctccaccccggagctg
cagcggctcatctctggagacaacgccgagatcgatctggaagatctgaagaagcacacc
gtgtactatggtggctttcacggaagtcaccgggtcatcatctggctctgggatattctg
gcttccgacttcacgcctgatgagagagccatgtttctgaagttcgtgaccagctgctcc
aggcccccgctcctgggattcgcctacctcaagcctccgttctccattcgctgtgtggaa
gtgtcggacgatcaggacactggagacaccctaggcagcgtcctccggggcttcttcacc
atccgaaagcgagagccgggcggccggctgcccacctcctccacttgcttcaacctgctc
aaactgcccaactacagcaagaagagcgccctccgcgacaagctgcgctacgccatcagc
atgaacacgggcttcgagctctcctag
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integrated database retrieval system
