Dipodomys merriami (Merriam's kangaroo rat): 138808945
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Entry
138808945 CDS
T11079
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04659
Th17 cell differentiation
dmer04710
Circadian rhythm
dmer05017
Spinocerebellar ataxia
dmer05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
138808945 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
138808945 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
138808945 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
138808945 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138808945 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dmer03310
]
138808945 (Rora)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138808945 (Rora)
Nuclear receptors [BR:
dmer03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138808945 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138808945
NCBI-ProteinID:
XP_069851364
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All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGTDPAAGSRETPLNPESARKSEPPGPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagtggcacc
gacccggccgccggttccagggagaccccgctgaaccccgaatccgcccgcaagagcgag
ccacccggtccggtacgcagacagagctattccagcaccagcagaggtatctcagtaaca
aagaagacgcatacatctcaaattgaaattattccatgcaagatctgtggagacaaatca
tcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagtaacgccacctactcctgtccccggcagaagaactgtttgattgatcgaacc
agcaggaaccgttgtcaacactgccggttgcagaaatgtctggctgtggggatgtctcgt
gatgctgtcaaattcggccgaatgtccaaaaagcagagagacagcttgtatgcagaagtg
cagaagcaccggatgcagcagcagcagcgagaccaccaacagcagcctggagaggcagag
ccgctgacacccacctacaacatctcagccaatgggctgacagagctgcacgatgacctc
agcacctacatggacggccacacccctgagggcagcaaggccgactctgctgtcagcagc
ttctacctggacatccagccctccccagaccagtccgggctcgatatcaatgggatcaaa
ccagaacccatttgtgactacacaccagcatccggtttctttccctactgctccttcacc
aatggcgagacttccccaaccgtgtccatggcagaactagaacaccttgcacagaatata
tctaaatcacacctggaaacctgccaatacttgagagaagagctgcagcagatcacgtgg
cagaccttcctgcaggaagaaattgagaactatcaaaacaagcagcgggaggtgatgtgg
caattatgtgccatcaaaatcacagaagctatacagtatgtggtggagtttgccaaacgc
attgatggatttatggagttgtgtcaaaatgatcaaattgtgcttctgaaagcaggttcc
ctagaggtggtgtttatcagaatgtgccgtgcctttgactctcagaacaacaccgtgtac
tttgatgggaagtatgccagcccagatgtcttcaaatccttaggttgtgaagactttatt
agctttgtgtttgagtttggaaagagtttatgttctatgcacctgactgaagatgaaatt
gcattattttctgcatttgtcctgatgtcagcagatcgttcctggctgcaggaaaaggta
aaaattgaaaaactgcagcagaaaattcagctagctcttcaacatgtcttacagaagaac
caccgagaagatggaatactaacaaagttaatatgcaaggtgtctacgttaagagcctta
tgcggacggcatacagaaaagctaatggcgtttaaagcaatatacccagacattgtacga
cttcattttcctccattatacaaagagttgttcacttcagaatttgagccagcgatgcaa
attgacgggtaa
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