Dipodomys merriami (Merriam's kangaroo rat): 138808974
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Entry
138808974 CDS
T11079
Symbol
Nedd4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
dmer04144
Endocytosis
dmer04530
Tight junction
dmer05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138808974 (Nedd4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138808974 (Nedd4)
09144 Cellular community - eukaryotes
04530 Tight junction
138808974 (Nedd4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
138808974 (Nedd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138808974 (Nedd4)
04121 Ubiquitin system [BR:
dmer04121
]
138808974 (Nedd4)
03029 Mitochondrial biogenesis [BR:
dmer03029
]
138808974 (Nedd4)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138808974 (Nedd4)
Membrane trafficking [BR:
dmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138808974 (Nedd4)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
HECT type E3
138808974 (Nedd4)
Mitochondrial biogenesis [BR:
dmer03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
138808974 (Nedd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
138808974
NCBI-ProteinID:
XP_069851450
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MAQSLRLHFTARRSNTYPLSETPEDELDRRLPGSLQTPARISASNVVQMNLTPRHAAFAA
PFTQDHGKPREVAFVPSSDSVQKKTSCLQISLQPIRYGGGLQSSHVLTEGEDVLFAVIDH
ELHDAPAPGSGSLSNVSASDNGSCSSTGSDYGSCTSITSGGSYSNSVLSDSSTCTCPPSD
ETLFGGTLSSDSTSNTTKPHRSTPPCEIFSRSPSVVPIIQDGSEPGLDVVNSPVSRNTKI
PLKRCSSLVIFPRSPSTTPPASPTTTGLLPSRGAYQTSHQLVVSPNEPGHHEDGTSAKGF
LSTAVNGLRLSKTLGTPGEVRDIRPLHTSPKRVVVSNHNRPNPTLCEKSAEGYACVSVQF
TQQTASPLDGETKGDRQPERSEMKFPSESQHPKFPPRAPSACLPNTPNMDCQVSISGELE
RPKPQTHRNHATLQRSISLGGTYPNISCLSSLKHNCSKGGPSQLHIKFASGSEVKVDNLS
RESNRDFTGQLSHSYKTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVK
GYLRLKMTYLPKTCGSEEDNAEQAEELEPGWVVLDQPDAVCHLQQQQEPSPLPPGWEERQ
DVLGRTYYVNHASRRTQWKRPTPQDDLTEAEGGDMELQAQRAFTTRRQISEEAEAMDPRD
ASETWEVIREDEAATYSVQPFPSPPTSSNVDMHPHLAEELNARLTMCGDPATSQPMSSSN
HSSRRGSLQAYTFEEQPTLPVLLPTSFGLPPGWEEKQDERGRSYYVDHNSRTTTWAKPST
QPTMDTSQLPSGQSSAGPQPLLPTSDPALQVTQPSEIEQGFLPKGWEVRHAPNGRPFFID
HNTKTTTWEDPRLKIPAHLRGKSSLDPPKDLGPLPPGWEERTHTDGRIFYINHNIKRTQW
EDPRLEHVAITGPAVPYSRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRTTVLEESYRRVM
SVKRTDLLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQIN
PNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKPITLHDMESVDGEY
YNSLRWILENDPTELDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRF
VNRIQKQMSAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYCAN
HQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQWGAPEKL
PRAHTCFNRLDLPPYGSFEELWDKLQMAIENTQGFDGVD
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcttgcgactgcacttcacagcaagaagaagcaacacttaccctctgtcg
gaaactccagaagatgagctggacaggcggcttcccgggtccctccagaccccagcacgg
atttcagcctcgaatgtagttcagatgaacctgacccctaggcacgctgccttcgctgct
ccgttcacacaggaccatgggaagcctcgggaagtagcatttgtcccttcctccgacagt
gtgcagaagaagaccagctgcctgcagatttccctccagcccataaggtacggtggaggt
ctccagtctagccacgtcttaaccgagggggaggatgtcttatttgctgtgattgatcat
gaactccacgatgctcctgcccccgggagtgggagcctcagtaacgtgtcagccagtgac
aatggatcctgcagtagcactggtagcgattacggctcctgtacaagtatcacgagtgga
ggttcgtactcaaacagtgtcctcagtgacagtagtacgtgcacttgcccaccaagtgat
gagacactttttggtggcactttatcttccgacagcacctcgaatacaaccaaaccacac
aggagcacccctccctgtgagattttttccagaagtcccagtgtggtccccatcatccag
gatggctcagagcctggactagacgtggtgaactcgcctgtgagcaggaatacaaaaatc
ccactcaagcgctgttcctccttagtcatttttcctaggagtccttcaaccacgccgcca
gcttcccccaccaccacgggtcttctcccaagcagaggagcctaccaaacctctcaccag
ttggtggtttctcctaatgagcctggacatcacgaagatggcaccagtgccaaaggattc
ctctccacagctgtcaatggactccgattatccaaaacactcgggaccccgggagaagtg
agagacatccggccactccatacatcaccaaagagagttgttgtttcaaatcataacagg
ccaaacccgactctgtgtgagaagtcggccgaagggtatgcttgcgtttcagtgcagttc
acccaacagacagcaagcccgttagatggtgaaacaaagggtgatcgtcaaccagagagg
tcagaaatgaagtttccttctgagtcccagcatcccaagttcccacctagggcaccatcg
gcttgcctaccgaatacccccaacatggattgccaagtcagtatcagtggagagttggaa
agaccaaagccgcagacgcacagaaaccacgctacgctacaaagaagtatttcattggga
ggaacgtatccaaatatttcctgtttatccagcctgaagcacaattgttctaagggggga
ccatcgcagttacatataaaatttgcatctggaagtgaagttaaagttgataatttatca
agagagagcaacagagatttcacaggccaactgtctcattcttacaagacaagagatgat
ttcctaggtcaagtggatgttcctctttatccattaccgacagaaaatccacgaatggag
agaccatatacatttaaggattttgttcttcacccaagaagtcataaatcaagggtgaaa
ggttatctgagattaaaaatgacttatttacctaaaacctgtggctcagaagaagataat
gctgaacaggcagaagaattagagcctggctgggttgttttggaccaaccagacgctgtc
tgccatttgcagcagcagcaagaaccttctcctcttcccccaggatgggaagagcggcag
gacgtccttggaaggacctactatgtaaaccatgcatcgcgaagaacacagtggaaaaga
ccaaccccgcaggatgacctaacagaggctgagggtggggacatggagctgcaagcccag
cgcgcgttcaccactcggaggcagatctctgaggaagcagaagccatggatccccgggat
gcctctgagacctgggaagtgataagagaagacgaagccgccacgtacagtgttcagcct
ttcccatcaccaccaacatcgagtaacgtggacatgcatcctcaccttgcagaagaatta
aatgctagactcaccatgtgtggtgatccagccactagccagcccatgtccagctcaaat
cattccagcagaagaggcagtttacaagcctatacttttgaggaacagcctacacttcct
gtgcttctgcctacatcattcggattgccacctgggtgggaagaaaaacaagatgaaaga
ggaagatcgtattacgtcgatcacaattctagaaccaccacttgggcaaaaccctccaca
cagcccaccatggacaccagtcagctgccatcaggccagagctcggcaggccctcaaccg
ctgcttcccaccagtgacccagcgttgcaggtgacacagccatctgaaattgaacaagga
ttccttcctaaaggctgggaggtccgccatgcaccaaatggaaggcccttcttcattgac
cacaacaccaaaaccaccacctgggaagatccaagattgaaaatcccagctcatctgaga
ggaaaatcttcactggacccacctaaggatctaggacctttacctccaggatgggaagaa
agaacccacacagatggaaggatcttctacataaatcacaatataaaaagaacccagtgg
gaagaccctcgcttggagcatgtcgcgattactggaccagcagtgccttactccagagat
tacaaaagaaagtatgaattcttccgaagaaagttgaagaagcagaatgacattccaaac
aaatttgaaatgaagcttcgccgaacgactgttctagaagagtcctaccggagagtgatg
agtgtcaagagaaccgacctcctcaaggctcggctttggatcgagtttgatggtgaaaag
ggcttagactacggaggagtggccagagaatggttcttcctcatctcaaaggaaatgttt
aacccctactatgggttgtttgaatactctgctacggacaattacaccctacagataaac
cccaattctggcctgtgtaacgaggatcacctttcttacttcaagttcattggtcgagtc
gccggcatggctgtttatcatggaaaactcttggatggtttcttcatccgcccgttttac
aagatgatgctacagaaaccaataactcttcatgacatggagtcagtggatggtgaatat
tataattcgctaagatggattcttgaaaatgatccaacagaattggacctcaggttcatc
atcgatgaagaactttttggacagacacatcaacatgagttgaaaaatggaggatcagaa
atcgtggtcaccaataagaacaaaaaggaatatatttaccttgtaatacaatggcggttt
gtcaaccgaatccagaagcagatgtctgcttttaaagagggtttttttgaactaatacca
caggatctcatcaaaatttttgatgaaaatgagctggagctcctgatgtgtggattggga
gacgtcgatgtgaatgactggagagaacacaccaaatataaaaatggctactgtgccaat
caccaagtcatccagtggttctggaaggcagtcttaatgatggactcagaaaaaagaata
agattgctccagtttgtcaccggcacgtcccgtgtgcctatgaatggatttgctgaactc
tatggctcaaatggaccacagtcgtttacggtggagcagtggggtgctccagagaagctg
cccagagcgcacacctgcttcaatcgcttggacctgccaccctatggatcatttgaagaa
ttatgggataaactgcagatggcaatcgaaaacactcagggttttgatggcgttgattaa
DBGET
integrated database retrieval system
