Dipodomys merriami (Merriam's kangaroo rat): 138808990
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Entry
138808990 CDS
T11079
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
138808990 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138808990 (Myo5a)
04131 Membrane trafficking [BR:
dmer04131
]
138808990 (Myo5a)
03029 Mitochondrial biogenesis [BR:
dmer03029
]
138808990 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmer04812
]
138808990 (Myo5a)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
138808990 (Myo5a)
mRNA cycle factors
P-body specific factors
138808990 (Myo5a)
Membrane trafficking [BR:
dmer04131
]
Others
Actin-binding proteins
Myosins
138808990 (Myo5a)
Mitochondrial biogenesis [BR:
dmer03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138808990 (Myo5a)
Cytoskeleton proteins [BR:
dmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
138808990 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_16
AAA_22
nSTAND3
NPHP3_N
DUF5382
MC7
CoV_S2
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
138808990
NCBI-ProteinID:
XP_069851487
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGDANNFHYTKQGGSPVIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFTSRDSDSCTIPPKHEPLSIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLSRTPVKPTKGRPGQMAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKYLRMQRAAITVQRYVRGYQARCYAKFLRRTKAATIIQKNWRMYVVRKKYKIRRAA
TIVLQSCLRGYLARNRYHKILREHKAVIIQKWVRGWLARTHYRRTLEAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTSLEGAYSSE
TEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTQSEKKSIEERADRYKQET
EQLVSNLKEENSLLKQEKEVLNHRIVEQAKEMTETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMVNVPKPGHKRTDSTHSSNESEYTFSSEMAEMEDIPSRA
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVMQDELDRREEQVLRSKAKEEERPQLRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRSSA
MDCHELNEDGELWLAYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVAKQMFYIVGAVTLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVSVSFIRTIQVRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFIARV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacacaaagtttgccagggtttggatacctgatcctgaggaa
gtctggaagtcagcagagttgctcaaagattataagcctggagataaagtcctcctactt
cacctggaggaaggaaaggatttggagtaccgtctcgatccaaaaaccaaggagctgcct
catttacgaaacccagacatcctcgttggtgaaaatgacctcacagctctcagctacctt
cacgagcctgctgtgctccataatctcagagtccgttttattgactccaaacttatttat
acatactgtggaattgtcctagtagctataaatccctatgaacagctgcccatctatgga
gaagacatcatcaatgcatatagtggtcagaacatgggggacatggatcctcacatcttc
gcagtagctgaagaagcttacaagcaaatggccagagatgagcgaaatcagtccatcatt
gtaagcggagaatctggggcaggaaaaacggtctcggctaagtatgccatgagatacttt
gccaccgtgagtggctccgccagtgaggccaatgtggaggagaaagtgttggcttccaac
cccatcatggagtcaattggaaacgctaaaacaaccagaaatgacaatagcagccgtttc
gggaagtatattgagattggctttgataagcgatatcgaatcatcggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaagagagaaactaccat
atcttctatcagctctgtgcttcagcaaagttacctgaatttaaaatgctacgattagga
gatgcaaataacttccattacacaaagcaaggaggtagtcctgtgattgaaggagtggat
gatgcaaaggagatggcccacaccaggcaggcctgcactctgctggggattagtgaatct
tatcaaatgggaatttttcgaatacttgctggcatccttcacttaggcaatgttgggttt
acatctcgagattcggacagctgcacaattcctcccaagcacgaacccctgagcatcttc
tgtgacctcatgggcgtggattatgaggagatgtgtcactggctctgccaccggaagctg
gccacagccaccgagacgtacatcaagcccatctctaagctgcaggccacaaatgcccgt
gacgctttggccaagcacatctatgccaagctcttcaactggattgtagatcatgtcaat
caggcactccactctgctgtaaagcaacactcttttattggcgtgctagacatttatggg
tttgaaacatttgagataaatagttttgaacagttttgcataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaactggaacaagaagaatatatgaaagaa
caaatcccctggacacttatagatttttatgataatcagccttgtattaatctaatagaa
tctaagctgggtattctagacttgctggatgaggaatgcaagatgcccaaaggtacagat
gacacttgggcccagaaattgtataacacacacttgaacaaatgtgcactctttgaaaag
ccccgtttgtcaaacaaagctttcatcatccaacattttgctgacaaagttgaatatcag
tgtgaaggctttctggaaaagaacaaagacactgtttttgaagaacaaattaaagttctt
aagtcaagcaagtttaagatgctaccagaactttttcaagatgatgaaaaggccatcagc
ccaacttcagccacctcttcggggcgcacacccctcagccgcactccagtaaagcccact
aaaggcagaccaggccagatggccaaagagcacaagaaaacagtggggcaccagttccga
aactcccttcacctgctaatggagaccctcaatgccaccacccctcactacgtgcgctgt
atcaagcccaatgacttcaagtttcctttcacgtttgatgagaagagggctgttcagcag
ctgagagcatgtggcgtcctggaaaccatccgaatcagtgcagcaggcttcccctcccgg
tggacttatcaggaatttttcagccgttaccgggtcctaatgaagcaaaaggatgtactg
ggtgacagaaagcaaacctgcaagaatgtgttagagaaactcatactggacaaggacaaa
taccagtttggtaagacaaagatctttttccgggctggtcaagtggcctatctagaaaag
ctcagggcagacaaactgagggctgcctgtatccggatccagaaaaccatccgagggtgg
ctgctaaggaagaagtacctgcggatgcagagggctgccatcactgtgcagagatatgtg
cggggttatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagccaccatc
attcagaagaactggcgcatgtacgtggtccgcaagaagtacaagattagacgtgctgcc
actattgtccttcagtcatgtttgcgaggctacttggccaggaaccgctatcacaagatt
ctccgtgagcacaaagcagtcatcattcagaagtgggtccggggctggctggcccgcaca
cactacaggaggactttggaagctatcatctaccttcagtgctgcttccggcggatgatg
gccaagcgtgagttaaagaaactcaaaattgaggctcgctccgtggagcgctacaagaag
ctccacatcggcatggagaacaagatcatgcagctgcagcgtaaggtggatgagcagaat
aaagactacaaatgcctaatggagaaactgaccagtctggaaggcgcatacagctctgag
actgagaaactacgaagtgacttagaacgtcttcagctaagtgaggaggaggctaaggtt
gccactggacgggtcctgagtctacaggaagaaattgccaagctccggaaagacctggaa
caaacccagtcagagaaaaaatccattgaagaacgagcagatagatataaacaagaaact
gagcagctggtgtcgaacctgaaggaagaaaatagtttgctgaagcaggagaaagaggtc
ctcaatcaccgcatcgtggaacaggcgaaggagatgacagaaactatggagaagaagtta
gtagaagaaacaaaacaactggaacttgatctaaatgatgagaggctgaggtatcagaac
cttctgaatgaattcagtcgcctggaagaacgatacgatgacctcaaggaagagatgacc
ttgatggtgaatgtgcctaagcctggacacaagagaacagactctacccacagcagcaac
gagtccgagtatacctttagctctgaaatggcagaaatggaagacatcccatcaagagca
gaggagccgagcgagaagaaagtacctctggacatgtccttgttcctcaagctacagaag
cgagtcacagagctggagcaggagaagcaggtgatgcaggacgaactagaccgcagagag
gagcaggtgctgcgcagcaaggccaaggaagaagaaagaccacaacttagaggtgcagaa
ctggaatatgagtccctcaagcgtcaagaactcgagtcagaaaacaagaaactgaaaaat
gagctcaatgagttacgcaaagccctcagtgagaaaagcgctccggaggtgacggcgcct
ggagctcctgcctaccgcgtcctcatggagcagttgacctcagtgagtgaggagctggat
gtccgcaaggaggaggtcctcatcctgcggtctcagctggtcagccagaaagaggccatc
cagcccaagaatacaatgacagatgccacaatacttttggaagatgtacaaaaaatgaaa
gataaaggcgaaatagcacaagcatacattggtttgaaagaaacaaacagatcatctgct
atggattgccatgagttgaatgaggatggagagctgtggctggcttatgaagggttaaaa
caagccaacaggctcttagaatcgcaactgcaatcacagaagaggagccatgagaacgag
gccgaggccctccgaggggagatccagagcctaaaagaggagaacaatcggcagcagcag
ctgctggcccagaacctgcagctgcccccggaggcccgcatcgaggccagcctgcagcat
gagatcacccggctgaccaacgagaacctgtattttgaggaattatatgcagatgaccct
aagaagtatcaatcctatcggatttcactttacaaacggatgattgatttgatggaacag
cttgaaaaacaggataagactgtccggaaactaaaaaaacaactgaaagtatttgccaag
aaaattggtgaactagaagtgggccagatggaaaatatatcacctgggcagatcatcgat
gagcccattcgtccagtcaacattcccaggaaggaaaaggatttccaaggaatgctggag
tacaagaaggaggacgagcagaagctggttaagaacctgattctcgaactgaagccacgt
ggtgtagcagtcaacttgatcccagggctgccagcgtatatcttgttcatgtgtgtgcga
cacgccgactacctgaacgatgatcagaaagtgaggtcattgctcacatcaacaatcaac
agcatcaaaaaagtgttgaagaaaagaggtgatgattttgaaactgtctccttctggctc
tctaacacatgccggtttctgcactgtttgaagcagtacagtggagaagagggcttcatg
aagcataacacatctcgccagaatgaacactgcctcaccaattttgacctggctgagtat
cggcaagtgctgagtgacttggccattcagatttaccaacagctggtgcgggtgttagaa
aacatccttcagccaatgatcgtgtccggcatgctggagcacgagacgattcagggtgtg
tccggggtgaagcccacaggactcaggaagcgaacctccagcattgctgatgaaggcaca
tacacactggactccatactccgacagctcaactccttccactcagtcatgtgtcagcac
ggtatggacccagaacttatcaagcaggtggccaagcaaatgttctacatcgtgggggcc
gtcaccctgaacaacctcctcctgcgcaaagacatgtgctcctggagtaaaggcatgcag
atcaggtacaacgtcagtcaactggaggaatggttacgtgacaagaatctgatgaacagc
ggggccaaagagaccctagagcctctcattcaggctgctcagcttctgcaagtgaagaag
aaaacagatgatgatgcagaagccatctgctccatgtgtaatgctctaaccactgcccag
attgtcaaagtgttgaatttgtacactccagttaacgagtttgaagaaagagtgtctgta
tcattcattcgtactatacaggtgcgtttgcgagacaggaaggactctcctcaactgctc
atggatgctaagcacatctttcctgtcacctttccttttaacccatcttcccttgcccta
gaaactatccagattccagccagcctgggcctgggcttcatcgcacgggtctga
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integrated database retrieval system
