Dipodomys merriami (Merriam's kangaroo rat): 138808991
Help
Entry
138808991 CDS
T11079
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
138808991 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138808991 (Myo5c)
04131 Membrane trafficking [BR:
dmer04131
]
138808991 (Myo5c)
03029 Mitochondrial biogenesis [BR:
dmer03029
]
138808991 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmer04812
]
138808991 (Myo5c)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
138808991 (Myo5c)
mRNA cycle factors
P-body specific factors
138808991 (Myo5c)
Membrane trafficking [BR:
dmer04131
]
Others
Actin-binding proteins
Myosins
138808991 (Myo5c)
Mitochondrial biogenesis [BR:
dmer03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138808991 (Myo5c)
Cytoskeleton proteins [BR:
dmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
138808991 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
nSTAND3
DUF5382
Nup54_57_C
NPHP3_N
Rnk_N
Motif
Other DBs
NCBI-GeneID:
138808991
NCBI-ProteinID:
XP_069851491
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIARDYRAGDEVLRLLLEDGTELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSKAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEVSFDKSNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLRSAEEFHYTSMGGNTVIEGVNDR
ADMVETQKTFALLGFKEDFQMDVFTILAAILHLGNVQITGVGSERSSINEDDDHLKVFCE
LLGLARGRVSQWLCNRKLVTSSETVVKPMTRAQASNARDALAKKIYAHLFDFIVEKINEA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRESKFQLCANFFQENPVPSSPF
GSMITVRSAKQIVKPNSRHFRTTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTQPELSFGDKKEVCKVV
LHRLIQDSNQYQFGKSKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
HAAVTIQQYFRGQQTVRKAITARALKEAWAAIIIQKHCRGYLVRNLYQLIRIATITIQAY
ARGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALRAGDVEKVQRLEAELERAAIYRHSCEEKDRRYRDAAEEKLAR
LQKRNSELEAEQEQTQLKLREKTEELQEKMDALTKQLFDDVQKEERQRILLEKNFELKTQ
DYEKQMQHLKEEIKALKEEKMQLCHQLEEERVTSEGLRGDVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMREKMSEITRQLLESYDVEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVMENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHQ
VTRLTSENMMIPDFKQQISELEKQKQDLELRLNEQSEKMKGKLEELSAQLPCSQEEEGTQ
RKAIEAQHEAHLRVKEQLLGTIQALQEAGEHSKAGQSEAEGENLEEELDTKDRVIKKLQD
QVKNLAKTVDKANARPLSSGPKEFLGMLEYRREDEPKLIQNLILDLKPRGVVVNMMPGLP
AHILFMCVRYADALNDASMLKSLMNSAINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLR
QYSGEEEFMKHNSPRQNKNCLNNFDLSEYRQILSDVAIRIYHQFITVMENNIQPIIVPGM
LEYESLQGISGLKPTGFRKRSSSIDDTDAYTITSILQQLSYFYTTMCQNGLDPELLRQAV
KQIFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQKSIAKETLEPLSQ
AAWLLQVKKTTDSDAKEICERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLN
NRGDSSQLMLDTKYLFQVTFPFAASPHALELIQIPSSFKLGFLNRL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacacagtacaacagggtttggattccggatcctgaagaa
gtttggaagtctgccgagatagccagagactaccgagctggtgacgaagtcctgcggctc
ctactggaggatggcacggagctggattatcccgtggacccaggctcgctgcctccactt
cggaaccccgacatccttgtgggtgagaatgacctcacagccctcagctacctccacgag
cccgccgtgctccacaaccttcgcatccgctttgcagagtccaagctcatctatacctac
agcggaatcattttggtggccatgaacccctacaagcagctgcccatctacggagacgcc
atcatccacgcctacagcgggcagaacatgggcgatatggatccgcacatattcgcagtg
gcagaagaggcctacaagcagatggccagaaaccatcgtaaccagtccattattgtgagt
ggagagtcgggtgcagggaagacggtgtcagcccgctatgccatgaggtacttcgccacc
gtcagcaaatcgagcagcaaggctcacgtggaggacaaggtcctagcatccaatcccata
accgaggctgtggggaatgctaagaccacgcgcaatgacaacagcagtcggtttgggaag
tacacagaagtcagcttcgacaagagcaatcagatcataggggccaacatgagaacctac
ctgctggagaaatccagagttgtcttccaatcagaaaatgaacggaattatcacattttc
taccagctgtgtgcatctgcacagcagtcggagtttaaacatcttaaactaaggagtgca
gaggagtttcactacacgagcatgggaggcaatacagtcatcgagggtgtgaatgacaga
gcggacatggtagagactcagaagacatttgcactcttgggtttcaaggaggattttcag
atggatgttttcaccatcctggccgccatcctgcatctgggcaacgtgcagatcactggg
gtgggcagcgagcggtcttccatcaatgaggatgacgatcacttgaaggtattctgcgag
ctcctgggcctggcgcgtggcagagtgtctcagtggctctgcaaccgcaagctcgtcacc
agctctgagaccgtggtgaaacccatgaccagagcccaggccagcaacgcccgggacgcg
ctggccaaaaagatctacgcgcacctgtttgacttcattgtggagaaaattaacgaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtgaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaactcgaacaagaagaatacatgaaggaagatatc
ccttggactctgatcgatttttatgacaatcagccagttattgacctgatagaagcgaaa
atgggcattttggagttactggatgaagaatgcttgttaccacacgggacggatgaaaat
tggcttcaaaagctgtataataattttgtcaacaagaactctttatttgaaaagcctaga
atgtcaaacacatcttttatcatccagcactttgctgataaggtggagtataaatgtgaa
ggctttcttgagaagaacagggacactgtctacgacatgctggttgaaatcctgagagaa
agcaagttccaactgtgcgccaacttttttcaagaaaatcccgttccttcttcccccttc
ggttcaatgatcacagttagatccgcaaagcagatcgtcaagcccaacagcaggcatttc
cggaccacagttggaagcaagttccgcagctccttgtccttgctcatggagaccctcaac
gccaccacaccccactacgttcgctgcatcaagccaaatgatgagaagttgcctttcgag
tttgactccaaaaggattgtccagcagctgcgagcctgtggtgttttagaaacgattcgc
atcagtgcccagagctacccatccaggtggacatacattgagttctacagccgctacggc
atcctcatgacccagccagagctctcctttggcgacaaaaaggaagtgtgcaaggtggtc
ttgcacaggctcatccaggattccaatcagtaccagtttggcaaaagcaagattttcttc
cgagcgggacaagtggcttacctagagaaactccgattggataaactgaggcagggctgt
attgtgatccaaaagcacgtccgtggctggctgcagaggaaaaagttcctccgggagaga
cacgctgctgtgactatccagcagtacttccggggccagcagacagtgaggaaagccatc
accgcaagggctttgaaggaggcctgggcagccatcatcatccagaagcactgccgtggg
tacctggtccgcaacctgtaccagctgatccgcatagccaccatcaccatccaggcgtat
gcccggggcttcctggcgaggaggaggtaccggaagatgctggaggagcacaaggctgtg
atccttcagaaatacgcccgggcatggctggcccgccgaagattccagaacatccgacgt
ttcgtgctcaacatccagctgacttacagggtccagcgtctgcagaagaagctggaggat
cagaacagagagaaccacgggctggtggagaagctgaccagcctggccgctctacgggct
ggcgacgtggagaaggttcagaggctggaggcagagctggaaagagcagccatctacaga
cacagctgcgaggagaaggaccggagatacagggatgccgcggaagagaaactggccagg
cttcagaagcgtaattccgaactggaagctgagcaggagcagacccagctgaagctccgc
gagaagacggaagaactccaagaaaaaatggatgctctcaccaagcagctctttgacgac
gtgcagaaagaagagcggcaaaggatactgctggagaaaaattttgagctaaagacacaa
gactatgagaagcagatgcagcatctgaaggaagaaatcaaggctctcaaggaggagaaa
atgcagctctgccaccagctcgaggaagagcgggtcacctctgagggcttgaggggcgat
gtggcccgactgagcaagcaagcaaagaccatctctgagtttgagaaggagatcgagttg
ctccaggcacagaagatagacgtggagaaacacgtgcagtcgcagaaacgggagatgaga
gaaaagatgtcagagattaccagacagcttctcgagagctatgatgttgaggatgtacga
agcagactctctgtggaagatctggaacatttaaatgaggatggtgaactctggtttgca
tacgagggactaaagaaggcgacacgagttatggagaaccatttccaatcccagaaggat
tgctacgaaaaagagatcgaagccctgaacttcaaagtggtgcatctcagtcaagaaatc
aaccatctgcagaaattattcagagaggaaaacgacatcaatgaaagcatccggcaccaa
gtcaccaggctgacgtcagaaaacatgatgatcccagactttaaacagcaaatttcagag
ctagagaagcagaagcaagatcttgaactccgcctgaatgaacaatctgagaaaatgaaa
ggaaaactggaggaactatcggctcagctcccttgcagccaagaagaggaaggaactcag
agaaaggccatagaagcccagcatgaagcacacctcagagtgaaagagcagcttctgggc
acgatccaggcactacaggaggctggagagcactcaaaggcagggcaatctgaagctgaa
ggcgaaaatctggaagaggagttagacacgaaggacagagtgattaaaaagctgcaagac
caagtgaagaatctggccaaaacggtggataaagccaatgccaggcctttgtcctcggga
cccaaggagttcctggggatgctggaatacagaagagaagatgaacccaagctcattcag
aacctcatccttgacttgaagccccgcggcgtggtggtgaacatgatgccggggctgccg
gctcacatcctgttcatgtgtgtccgctacgcagacgccctcaacgacgccagcatgctc
aagtccctcatgaacagcgccatcaacggcatcaagcaggtggtgaaggaacatctagaa
gactttgagatgctgtccttttggctttccaatacttgtcatttccttaactgcctcagg
cagtatagtggtgaagaggaattcatgaaacataacagcccccgtcagaataagaattgc
ctgaacaattttgacctttcggaatacagacagattcttagtgatgtggctatacggata
tatcatcagttcattactgtaatggaaaataacatccaaccaataatagtgccgggcatg
ctggagtacgagagcctgcagggcatctcgggcctgaagcccacgggcttccgcaagcgc
tcgtccagcattgacgacacagatgcctacaccatcacctccatcctgcagcagctcagc
tacttctacaccaccatgtgccagaatgggctggacccggagctgctgaggcaggctgtg
aagcagatattcttcctgatcggcgctgtcaccctgaacagcctcttcctgcgcaaggac
atgtgctcgtgcaggaaggggatgcagatcaggtgcaacatcagctacttggaagaatgg
cttaaagacaagaatctgcagaagagcatagccaaggaaacgctggagcccctctcccag
gcagcatggttgctccaggtcaagaagacgacggacagcgacgccaaggagatctgtgag
cgctgcacctcgctgtctgccgtgcagatcataaagatcctgaattcctacacgcccatc
gatgacttcgagaagagagtcactccatcctttgtccgcaaagtacaggctctcctgaat
aaccggggcgactcatcacagctgatgctggacaccaagtacctctttcaagtcaccttt
cccttcgccgcctctccacatgccctggagctgatccagatccctagcagtttcaagcta
ggttttctcaaccgattgtag
DBGET
integrated database retrieval system
