Dipodomys merriami (Merriam's kangaroo rat): 138809002
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Entry
138809002 CDS
T11079
Symbol
Dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
138809002 (Dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138809002 (Dmxl2)
Membrane trafficking [BR:
dmer04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138809002 (Dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
138809002 (Dmxl2)
RAVE complex
138809002 (Dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
138809002
NCBI-ProteinID:
XP_069851509
LinkDB
All DBs
Position
Unknown
AA seq
3054 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILASDFECVQIIPGAKHGNIQV
SCVECSHQQGRVAASYGNAVCIFEPLGINSHKRNSQLKCQWLKTGQFFLSSVTYNLAWDP
QDNRLLTATDSVQLWAPPGGDILEEEEESDNKIPPVLNDWKCIWQCKTSVSVHLMEWSPD
GEYFATAGKDDCLLKVWYPMTGWKSSIIPQDHHEVKKRQASTQFSFVYLAHPRAVTGFSW
RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSTASTLSHSGR
HKDRIQHALETIHHLKNLRKGQRRSSVLVTHTESVHDQMATHEVQRHISHHANALCHFHI
AASIHPATDIPNALVGTAFNIEDGNGGFVVHWLNNKEFHFTSSTEIFMYQLRKLSEKQLD
HESNDADREDEERSQEERERGLRMKLDHELSLDRESEAGTGSSEHEDGEREGSPRTYSQP
SIPMPLPTVLLDRKIEMLLSEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQV
SFSSRIPVAFPSGDASSLSKNIMMYACINAMKDSHHAPSHQEMIPEDSPHGPQLHSRSHS
TNMNILAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHS
VLPLLLTSSHHNALLTPESDCQWDSDSNLNRIIDPVKHTKGLSKQPIRNAATRTFHDPNA
IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASA
CFVASDGKNLRLYQAVVDARKLLDELSDPEASKLIGEVFNIVSQQSTARPGCIIELDAIT
DQCGANTQLLHVFQEDFIIGYKPHKEDLEKKETEVFFQPSQGYRPPPFSEKFFLVVIEKD
RNNYSILHMWHLHLKSVQACLAKSSDNVSSENLLSVPGQKNVESSPETSPSMSPMPHSSS
IANLQTASKLILSSRLVYSQPLDLPEAVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCS
DNKVRFWKCCMETNPQCNSSDEKETYHWRRWPLMNDEGEDNSSTVSIVGRPVAVSCSYTG
RLAVAYKQPMHHNGFVSKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSRVS
VDSNLFVYSKSDALLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGI
VTEQTNSKDGVAVITLPLGGSIKQGVRSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGIL
VVGMDCEMHVYAQWKHAMKFGDTEADSPSAEETLQEHSTFKSSMLARKSIAEGTATADDV
FCSPTVVQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAI
VRDADVGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLYALLAADQDT
SYRISEESTKMPPSYEDHTENQPEDQYSELFQIQDITTDDIDLEPEKRENKSKVINLSQY
GPAYFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKNYSGRDT
LDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQ
RGDPQWSELRAMGIGWWVRNINTLRRCMEKVAKASFQRNNDALDAALFYLSMKKKAVVWG
LFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVC
LEKMEDIQLAMVIARLYESEFETSSTYISILNQKILGCSKDGSGFNCKQLHPDPFLRSLA
YWVMKDYTRALDTLLEQTPKEDSEHQVIIKSCNPVVFSFYNYLRTHPLLLRRNLASPEGT
LATLGLKTEKNIADKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKISSLPEKK
DQPDVFSQKIDDGPSGSVTLRDSTGSSGTDWSALTSSQFDWSQPIVKVDEEPLNLDWGED
HNDVSEEDEDAVGLVMKSSDTRGKDGQDQKASDPNMLLTPQEEDYPEHDTEVDVIAEQLK
FRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHDICNHEAVIKEYSSEMYS
KLESDLLDQEEMMDKPDIGSYERHQIERRRLQAKREHAERRKLWLQKNQDLLRVFLSYCS
LHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPV
LYLNNHIHDILYTIVQMKTPPHPTVEDVKVHTLHSLAASLSASIYQALCDSHSYSSQTEG
NQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLNSAQDEDQPKLNV
LLCEAVVAVYLSLLIHALATNSSNELFRLAAHPLNNRMWAAVFGGGVKLVVKPRRQSENI
SAPPVPSEDIDKHRRRFNMRMLVPGRPGKDATPPPVPAERPSYKEKFIPPELSMWDYFVA
KPFLPLSDSGVIYDSDESIHSDDEEDDAFFSDIQIQEHKDPNSYSWALMHLTVVKLALHN
VKNFFPIAGLEFSELPVTSPLGIGVIKNLENWEQILQEKMDQFEGPPPNYVNTYPSDLSV
GAGPAILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEILQETFIRYIFTKKRKQSE
SVEEHVEQVKQNHVSEDCHIKVEADLGYPGGKAKVIHKESDMIMAFSVNKANCNEIVLAS
THDVQELDVTSLLACQSYIWIGEEYDRESKSSDDVDYRGSTTTLYQASTASHSQVHPPSS
LPWLGSGQTSTGASVLMKRNLHNVKRTTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFR
QAGNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTSANPKPYMSWQCHSKATSDFAFIT
SSSLVATSGQSNDNRNVCLWDTLISPANSLIHGFTCHDHGATVLQYAPRQQLLISGGRKG
YICIFDIRQRQLIHTFQAHDSAIKALALDPCEEYFTTGSAEGNMKVWRLSGHGLIHSFRN
EHAKQSIFRNLGAGVMQIDISQDGRLFSCGADGTLKTRVLPNAFNIPSRILDIL
NT seq
9165 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtcctcaccggggctgtcaaccccggcgacaactgctactcggtg
ggcagcgtcggggacgtccccttcacggcatatggttcaggctgtgatattgttattttg
gcaagtgactttgaatgtgtgcagatcattcctggtgctaagcatgggaacatccaggtc
agctgtgtggagtgttctcatcaacaaggacgggttgcagcttcatatggtaatgctgtt
tgtatttttgagcccctggggataaattctcataagagaaatagtcaactcaagtgtcag
tggcttaaaactgggcagttttttttgagttctgtgacttacaacttagcttgggaccct
caagataacagattgttgacagcaactgattctgttcagttgtgggctcctccaggaggt
gatattctggaagaggaggaagaaagtgataacaaaattcctcctgttttaaatgactgg
aagtgcatctggcagtgcaaaacttcagtgtcggtacatctgatggaatggtctcctgat
ggtgaatattttgctactgctggaaaggatgattgtcttttgaaagtgtggtatcctatg
actggttggaaatcctcaattatacctcaggatcatcatgaagtgaaaaagagacaggcc
tctactcagttttcctttgtttacttggcacatcctcgagcagtgacaggtttttcatgg
cgtaaaacaagcaagtatatgcccaggggttctgtgtgtaatgtgttactaacttcatgc
catgatggtgtgtgtcggctctgggcagaaactttactaccagaagactgtcttttgggt
gaacagatttgtgagactactacctccagcactgccagcaccctttctcattctggaaga
cataaagatagaatacagcatgctcttgagacaatacatcatttgaaaaatctaaggaaa
ggacaaaggaggtcttcagttcttgtgactcacaccgaatcagtgcatgaccagatggca
acacatgaagttcaaagacatatttcccatcatgccaacgcactgtgtcactttcacatc
gccgccagcattcaccctgccacagatattccaaatgccctagttggcactgcatttaac
attgaagatggaaatgggggatttgtagttcattggttaaacaataaggaattccatttt
acatcatcgactgaaatatttatgtatcaattaagaaagctttcggagaaacagttagat
catgaaagtaatgatgcagatagagaagacgaggagcgttcacaagaggaaagagagagg
ggtttacgtatgaaactggaccatgaattatccctggatagagaatctgaggcaggtaca
ggatcatcagaacatgaagatggagaaagagaaggaagtcctagaacctattcacaacct
agcatcccaatgccactgcctacagtccttcttgaccggaagattgaaatgctgctttca
gaatggaataagaatcctgacatgctttttacaattcaccctgtggatggtacatttcta
gtgtggcatgtaaagtatttggatgaatataatcctggaatattcagacaagtccaggtt
tctttttcttctcggattcctgttgcgtttccctctggtgatgccagctctcttagtaaa
aacatcatgatgtatgcctgtataaatgctatgaaagattctcaccacgctccatcacac
caagaaatgatacctgaagacagtcctcatggaccacagctgcactctagatcacacagt
acaaatatgaacattttagctccaacagtcatgatggtctctaagcacatagatggatct
ttaaatcagtgggcagtcacttttgcagataagtctgccttcaccactgttctaactgta
tcccacaagtttcgatactgtggccatcgatttcatctcaatgacttggcatgtcattca
gttttaccactgttactgacatcctcccatcataatgctttgttgactcctgaatcagat
tgtcagtgggactcagatagtaatttaaataggataatagatcctgtgaaacacacaaaa
ggtttgtctaaacaacctattagaaatgccgcaacccgaacgtttcatgacccaaatgcc
atctacagtgaacttattctgtggcgtgtagacccaataggacctctgtcgtacactgga
ggagtgtcggaattggctagaattaactctttacatacctcagctttctctaatgtggcg
tggcttccaacgcttattcccagttattgccttggcacatactgcaattcagcaagtgct
tgctttgttgcatctgatggcaaaaatctgagactttatcaagctgtagtagatgcaaga
aaattattagatgaactgtcagatccagaagcttctaaacttattggagaagtgtttaat
atcgtgagtcaacagtctactgctcgacctggctgcattattgaacttgatgctataact
gaccaatgtggcgcaaatacacagttgcttcatgtgtttcaagaagacttcattatagga
tataaaccacataaggaagatctggagaaaaaggaaacagaagtattttttcagccatca
caaggatatcgaccaccaccattttcagaaaagttctttctagtagtaattgaaaaggac
aggaacaattactctattctccatatgtggcaccttcatcttaaatctgtgcaagcatgt
ttagcaaaatcttcagacaatgtttcatctgagaatctactctcagtccctggacagaag
aatgtggagtcgtctccagaaacctcccctagtatgagtcccatgccacattcttcatca
attgcaaatcttcagactgctagcaaacttattctgagttctcgactggtatatagccaa
cccctggatctccccgaagcggttgaagtaataagagcaacaccttcagcaggccatttg
agttcttcttcaatctatcctgtgtgccttgcgccttatttagtggtcacaacttgttct
gacaataaagtgcgcttctggaaatgttgtatggagaccaacccacagtgcaattcaagt
gatgagaaggaaacctatcattggaggagatggccccttatgaacgatgaaggagaagat
aacagcagtacagtgagcattgtaggaagaccagttgctgtgagctgttcatacacaggt
cgcctcgcagtggcttataagcagcctatgcaccacaatggttttgtttctaaagaattt
tccatgcatgtttgtatatttgagtgtgaatccactggagggtcagaatgggttttagaa
caaactattcatcttgatgatttggttaaggttgggagtgttcttgactcacgggttagc
gttgacagtaatctgtttgtatatagcaaatcagatgcacttttaagcaaggataggtat
cttattccaaatatcaagcatttagtacatttagactgggtgtcaaaagaagatggctcc
catattctcacagtgggggttggtgctaatatcttcatgtatgggaggctttcaggaatt
gtaactgagcagaccaacagtaaggatggcgtagctgtcattacgttgccactaggtggt
agtattaagcagggggttaggtcaagatgggttcttcttagatctatagacttggtgtcc
tctgtggatggtacaccttcactacctgtttctctctcttgggtaagagatgggatcttg
gtggtgggaatggattgtgaaatgcatgtgtatgcccagtggaagcatgctatgaaattt
ggggacacagaagctgatagtcccagtgcagaagagacattacaagaacattctaccttt
aagtctagcatgttggcaagaaaaagcattgctgaaggaacagctactgctgacgacgtg
ttttgctcaccaactgtagttcaagatggtggcttatttgaggctgcccatgtactttct
cctactctcccacagtatcatccaactcagttgttggaattgatggatttagggaaagtg
cggagggctaaagccatcctctctcatttagtaaaatgcattgcaggtgaagttgcaata
gttagagacgccgatgttggagaaggaactaagcgacatctttctcgaaccattagtgta
agtggcagtacagcaaaagatacagtcaccataggaaaagatggtactcgagattacacc
gagatagattctattcctccgctgccactatatgcattacttgctgcagatcaggataca
tcctacagaatttcagaagagagtacaaagatgcctccaagctatgaagatcatactgaa
aatcagccagaggatcagtattcagagctgtttcaaatccaggatataacaacggatgat
attgatttagagccagaaaagagagaaaataagtcaaaagtaataaatctttctcagtat
gggccagcttactttggccaggaacatgctagggtactttcaagtcaccttatgcactca
agtttaccaggccttacccgcttggagcagatgttccttgttgcactggcggatacagtg
gctaccaccagtactgagcttgatgaaaacagagataagaattactcaggaagagacacc
ttagacgaatgtggtttgagatacttgttagctatgcgcttgcacacatgccttttaaca
tccctgcctcctttataccgggtacagctacttcatcaaggtgtgtccacctgccatttt
gcttgggcttttcattctgaagctgaggaagaactgattaatatgatcccagcaattcag
cgcggagaccctcagtggtctgagttaagagctatgggaataggttggtgggtgaggaat
attaacacccttcgaagatgtatggagaaggttgccaaagcttcttttcagaggaacaat
gatgccttagatgctgcattattctacctttccatgaagaagaaagcagtggtgtggggt
ctgtttaggtcacaacatgatgaaaaaatgacaacgtttttcagccacaactttaatgaa
gacaggtggcgtaaagctgctttgaagaatgctttttctttgcttggaaaacaacgcttt
gaacaatctgctgcttttttcttattggccggctcattgaaagatgccattgaggtatgt
cttgaaaagatggaagacattcagctagccatggttattgcccgtttatatgaatcagaa
tttgaaacttcatccacttacatatctatcttgaaccagaagattttgggttgctctaag
gatggctcaggattcaattgcaaacaattacatcctgacccttttctgcgtagtcttgct
tactgggtaatgaaagattacactcgggccttggacacattattggaacaaacgccaaag
gaggattctgaacatcaagttatcatcaaatcttgtaaccccgtggtgttcagtttttac
aactatcttcgaacacatcctttacttcttcgaagaaatcttgcttctcctgaaggaact
ttggcaaccttaggtctcaaaactgagaaaaacattgctgataagattaacctcatagaa
agaaaattattctttaccactgcaaatgctcactttaaagttggatgccctgttttagcc
ctagaagtactttccaaaattcccaaagtaaccaaaatatcttccttacctgaaaaaaaa
gatcagcctgatgtcttctctcaaaagatagatgatggaccttcaggatcggtaactctg
agagatagcacaggaagttctggcactgattggtcagctctaacttcttcacagttcgac
tggagccagccaattgttaaagttgatgaggaacctcttaatcttgattggggtgaagat
cacaatgatgtctcagaagaggatgaagatgctgttggtttagtcatgaaaagctcagat
accaggggaaaagatggacaagatcagaaggcctcagatcctaacatgttattgacccct
caggaagaggattatcctgaacatgatactgaggttgatgtgattgctgaacagttaaaa
ttcagggcttgcttaaagatcctaatgactgaactgagaactttggctacaggttatgaa
gtggatggaggaaagctcagatttcaactttacaactggcttgaaaaggaaattgctgcc
ctgcatgacatatgtaatcatgaggcagttattaaagaatattccagtgaaatgtattct
aaattagagagtgatcttttggatcaggaagaaatgatggacaaaccagacattggctcc
tatgagcgccaccaaatagaaagacgaagattacaagctaaacgagaacatgcagaaagg
cgaaagctgtggttgcagaagaaccaggaccttttaagagtgtttcttagttattgtagc
cttcatggggcccaaggtggtgggctggcctcagtaagaatggaactgaaatttttgtta
caagaatcacagcaggaaactacagtaaaacagctccagtctccactgccattgcctact
actctccctctgctttcagcaagtattgcttcgacaaaaacagtcatcgctaatcctgtc
ttatacttaaataaccacattcatgatattctttatactattgttcagatgaaaacacca
cctcatcccactgttgaagacgtgaaggtgcacacacttcattcattagcagcatcactc
tccgcgtccatttaccaagcgttatgtgacagtcatagctacagtagtcaaacagaagga
aatcagttcacaggaatggcttatcaaggacttcttttaagtgatcgtcgaagactcagg
acagaaagcatagaagaacatgcaacgccaaattcatctcctgctcagtggcctggtgtg
agctcgcttattaatctcttgaattcagcccaagatgaagaccagccaaaattgaatgtt
ttgttgtgtgaagcagttgttgctgtttacttaagtttattgatccatgcccttgccaca
aattcctccaatgagttgtttcggcttgcagcccacccattaaataaccgaatgtgggct
gctgtttttggagggggcgtgaagcttgttgtaaagcctcgaagacaatcagaaaacatt
tcggcacctcctgttccttctgaagacatagataaacaccggaggagatttaacatgcga
atgctggtccctggaaggcctggaaaagatgccaccccaccaccagtgcctgcagaaaga
ccgtcttacaaagaaaagtttatccctccagaacttagtatgtgggattactttgttgcc
aagccatttcttcctctgtctgatagtggtgtgatatatgattctgatgaaagcattcac
agtgatgatgaagaagatgatgcctttttttcagacatacagatacaggaacacaaggat
ccaaactcctacagctgggctcttatgcacttgacagtggttaagctggcgcttcacaat
gtcaagaatttctttcccattgctggactggaattctctgagctacctgtaacgtcacca
ttaggtattggtgtgattaagaacttggagaactgggaacagatcctgcaggagaaaatg
gatcagtttgagggcccaccccccaactatgtcaacacgtatccatctgacctttcagta
ggagctggaccagctatccttcggaataaagcaatgctagaacctgaaaatactccattc
aagtcccgagattcttctgcacttccagtcaagagactttggcatttcctagttaaacaa
gaaatcctccaagagacatttattagatacattttcaccaagaaaagaaaacagagcgag
tctgtagaagaacatgtggagcaggtcaaacaaaaccacgtatcagaagattgccacatc
aaggttgaagctgatctgggttatcctggaggaaaggcaaaggtcattcataaggaatct
gacatgatcatggcgttttctgttaataaggcaaactgcaatgaaattgttttggcttcc
acacatgatgttcaagaacttgatgtcacttctctcctggcctgtcaatcttatatatgg
attggagaagaatatgacagagaatccaaaagctcagatgatgttgattaccgaggttcc
accactacgctgtatcaagccagcacagcttcccattcccaggtgcatcccccttcatct
ctgccctggttaggtagcggacagaccagcaccggagccagtgtgcttatgaaaaggaac
ctacacaatgttaagagaacgacatcccaccctgtccatcaatactatcttacaggtgct
caggatggcagtgtccgaatgttcgaatggacacgacctcaacaacttgtctgcttccgt
caagctggcaatgcaagagttactagattgtattttaactcacagggtaacaagtgtggt
gttgcagatggagaagggtttctgagtatctggcaagtgaaccagacttcagctaatcct
aaaccctacatgagttggcagtgccacagtaaagccacaagtgactttgcatttattacc
tcgtcaagtctagttgcaacatctggacagtccaatgacaatagaaatgtatgcctctgg
gacacgctgatatcacctgccaacagcctcattcatggttttacatgccacgaccatggg
gctacagtacttcagtatgcgcccaggcagcagctcctcatctccggggggagaaaaggc
tacatctgcatctttgacatccgacagcgccagctaatccacacattccaggcgcacgac
tcggccatcaaggccttggcgctggatccttgtgaggagtacttcactacaggttccgcg
gaggggaacatgaaggtgtggagattgtcaggccacggcctgatccactcgttcaggaat
gagcatgccaagcagtccatcttcagaaacctcggggctggggtcatgcagatcgacatc
agccaggacggccggctcttctcctgtggcgctgacggcacactgaaaaccagggttctc
cccaatgctttcaacatccccagtagaatcctcgacatcctctaa
DBGET
integrated database retrieval system
