Dipodomys merriami (Merriam's kangaroo rat): 138809197
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Entry
138809197 CDS
T11079
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138809197 (Pms1)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138809197 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138809197
NCBI-ProteinID:
XP_069851742
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVLSVVKELIENSLDAGATSIEVKLENYGFDKIEVRDNGEG
IKAVDTPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTTKKCKDEIKKIQDLLISYG
IIKPGLRLVFVHNKAVIWQKSRVADHKMALMSVLGTSVMGNMESLQYHSEESQIYLSGFF
PKHDADHSSTSLSTPERSFIFINSRPVHQKDILKLVRRYYSLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMMTFYGPVPSTNSHENDKTDVSSAETVE
ADVLFNKIETSGNKCPNGDIETIASQKGVHNDESQKTTEHCLNHQINSSDAHFNSENSDI
SKNTRNIVEKNIRNNLSWEDIQSEGSEACFKGSIKHIQLENSSKSHIDDSGKHKEALSPE
KSLDICAEDWSKGNLLNSVGENIEPVKILVPQNSLACRISDNDQGLEQKSLSDGSYSKKS
NVIDNKSGQLTAYDLISNHVIKKPMSASAIFIQDHRAQFLTENPKTSLEDAAVQIEELWK
TLTKEEKLKYEEKATKDLERYNTQMKKAMERESQISLKDNRKKIKPTSTWSLAQKHKLKT
SLSNQPKLDELFQSQNEKKRSKNIKIIEIPFSMENLKINFEKQKEFDSEEKDELCLIHNL
RFPDAWLVASKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLDQPIILTESLFNGSHYLE
ILCKMASNNQRCSGSTYLSDPRLTANGFKIKLIPGVSITESHLEIEGMANCLPFYGVTDL
KEILNAILNKNAKEIYECRPRKVISYLEGEAVRLSRQLPMYLPKEDIKNTIYRMKHQFAN
EIKGCVHGRPFFHHLTYLPETS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgccgcaacagttcgcctcctttcaagttctcagataatcacttct
gtgctcagtgttgtgaaagaactcattgagaactctttggatgctggtgccacaagcata
gaggttaagctggagaactatggatttgataagatagaggtgagagacaatggtgagggt
atcaaggctgttgatacacctgtaatggcagtgaagtactacacttcaaagataaacagt
catgaagatctggaaaacctgacaacttatggttttcgtggggaagccttaggttcaatt
tgttgtgtggcagaggttttaattacaacacgaacagctgctgataattttagcactcaa
tatgttttagatggcagtggtcacatactttctcaaaaaccttcacatcttggtcaaggt
acaactgtaactgctttaaggttatttaagaatcttcctgtaagaaagcaattttattca
accactaaaaagtgcaaagatgaaataaaaaagatccaggatctcctgataagctatggt
atcataaagcctggtttaaggcttgtttttgtacataataaggcagttatttggcagaaa
agtagagtagcggaccacaagatggccctaatgtcagttctggggacttctgttatgggc
aacatggaatccttacagtaccattctgaagaatctcagatttatcttagtggattcttt
ccaaagcatgatgctgaccacagttccacaagtctttcaaccccagagagaagtttcatt
ttcataaatagtcgaccagtacatcaaaaagacatattaaagttagtccgacgttattac
agtcttaaatgcctaaaggaatccactcgtttgtatccaattttctttctgaaaatagat
gttcctacagctgatgtggatgtaaatttaacaccagataaaagtcaagtattattacag
aataaggaatctgttttaattgctcttgaaaatctgatgatgactttttacggaccagta
cctagtacaaattctcatgaaaatgataaaacagatgtttcctcagctgaaacagtagaa
gcagatgtgctttttaataaaatagaaacatctggaaataaatgtccaaatggtgatatt
gaaactatagcttcccaaaaaggtgtacataatgatgaatctcaaaaaaccactgagcat
tgtttaaatcaccaaataaatagtagtgatgctcattttaatagtgaaaattctgacatc
agtaagaacactagaaatatagttgaaaaaaacataaggaataacttatcctgggaggat
atccaaagtgaaggtagtgaagcttgtttcaaaggttctattaagcatatacaattagaa
aatagcagtaaaagccatatagatgatagtgggaagcataaagaagcattgtctcctgaa
aagtctttagatatttgtgcagaggactggagcaagggaaatttacttaattcagttgga
gagaatattgaacctgtgaaaattttagtgcctcaaaacagtttagcctgcagaataagt
gataatgatcaaggccttgaacaaaagagtctcagtgatggttcctatagtaaaaaatca
aatgtaatagataacaagtcaggacagcttacagcttatgacttaattagtaatcacgtg
atcaagaaacccatgtcagcaagtgccatttttattcaagatcatcgtgctcagtttctc
acagaaaatcctaagaccagtttggaggatgcagcagtacaaattgaagaactgtggaag
acattgactaaagaggaaaagttgaaatatgaagaaaaggcaactaaagatttggaacga
tacaatactcaaatgaagaaagccatggaacgagagtcacaaatatcattaaaagataac
agaaaaaagataaaacccaccagcacctggagtttggcacagaaacacaagttgaaaact
tctttgtctaatcagccaaaacttgatgagctctttcagtcccaaaatgaaaaaaaacgg
agtaaaaatattaaaataatagagatacctttttcaatggaaaacttaaaaataaacttt
gagaaacaaaaggagtttgactcagaagagaaggatgaactttgcttaatccacaatctt
aggtttcctgatgcatggctagttgcatccaaaacagaggtaatgttactgaatccatac
agggtagaagaagccctgctatttaaaagacttcttgagaatcataaacttcctgcagag
ccactggaccagccaattatacttacagaaagtcttttcaacggatctcattatttagag
attttatgtaaaatggcatcaaataaccaaagatgcagcggatcgacttacctctctgat
cctcgtcttacagcgaatggttttaagataaagttgataccaggagtttccattactgaa
agccacttggaaatagaaggaatggctaattgtctcccattctatggagtaacggattta
aaagaaattctcaatgctatactaaacaaaaatgcaaaggaaatttatgaatgtagacct
cggaaagtgataagttatttagagggagaagcagtacgtctatctagacaactacctatg
tacttaccaaaagaggacatcaaaaatacaatctatagaatgaagcatcagtttgcaaat
gaaattaaagggtgtgttcatggtcgtccattttttcatcatttaacataccttccagaa
acttcttaa
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