Dipodomys merriami (Merriam's kangaroo rat): 138809275
Help
Entry
138809275 CDS
T11079
Symbol
Als2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer05014
Amyotrophic lateral sclerosis
dmer05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138809275 (Als2)
05022 Pathways of neurodegeneration - multiple diseases
138809275 (Als2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138809275 (Als2)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
138809275 (Als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
138809275
NCBI-ProteinID:
XP_069851932
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MDSKKKSSTEAEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLAWRSEPAEVCPSSPILENALVGHHVVTVATGSFHNGAVTDSGVVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKIEHLAGRVVLQIACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAENHASTATSPSTKTLDSQGEVFENTLVETGLP
VPTELNMGSVETASDNAISSHQNDEGTTEISSARNLPSYPDTKAVNEYLKKLSDHSIKED
SEKGEKTPPPQPLVEEAVPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKK
VINFYNAAPCETGIQTGPETLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLP
GLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVL
PRLQPLCVKCLDGKEIIYLEAGSYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLIK
LSSENGVWNVAAGQDYSLFLVDTEDFQPGLYYSGRQDPEEGASLPENPSGTKTPILLSCS
KLGYISRVTAGKDNYLTLVDKNIMGYIASLHELATTERRFYSKLSDIKSQILRPLLGLEN
LGTVTTVQLLQEVASRFSKLCYLIGQHGASLSSFLQGVKAARSLVILKHASLFLDSYTEY
CISITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLH
NYAKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFPGKMTD
SLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLS
EEAGSVNGLKITTPEEQFTLISSTPQEKTKWLRALSQAVDQALRGTSDLPPYGSSSSVQR
QEPPISRSAKYTFYKDPRLKDATYNGRWLSGKPHGRGVLKWPDGKMYTGMFRNGLEDGYG
EYRIPNKVLNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTS
SSPSMFIGQWVMDKKSGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHVN
KMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFNGEWGSGIKITGTYFK
PSLYETDKDRPKVFRKLGNLAVPPDEKWRAVFDECWHQLGCESPGQGEVWKAWDNIAVAL
TINRRQHKDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYEDIKKYLIKACDTPLHPLGR
LVETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRLFQLVRFLFPELPEEGSTIPLSAP
LPTERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDIYW
ECVLRLNKQTDIALLGFLGVQKKFWPVTLSILGESKKVLPTTKDACFASAVECLQQISTT
FTPSDKLKVIQQTFEEISQNVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIE
DLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagaaaagctctacagaggcagaaggatccaaagaaagaggcttggtc
catgtctggcaggcaggatccttttccctaacaccggagaggttgccaggctggggagga
aagactgttctacaagcagccctgggagtgaagcatggagttcttctgactgaagatggt
gaggtctacagctttgggacccttgcctggagaagtgaaccagcagaagtttgtccaagt
agccccattctagaaaatgctttggttgggcatcatgttgttactgtggcaacagggagc
ttccacaatggagcagtgacagatagtggtgtagtgtacatgtggggggagaattctgct
ggccaatgtgcagtagctaaccagcagtatgttccagaaccgaaccctgtcagcatttct
gattctgagaccagtcctttgttagcggtcagaattttgcagttggcatgtggcgaggag
catactctggcattgtcaataagcagagagatttgggcctggggtaccggttgccagctg
ggtctcatcaccactaccttcccagtgacaaagccacaaaagatagaacatcttgctggg
cgagtggtgctacaaattgcctgtggtgctttccacagcctagcccttgtgcagtgcctc
ccgtctcaggatctgaagccagtccccgaaagatgcaaccagtgcagccagctcctaatt
actatgaccgacaaagaagatcatgtgattatatcagacagtcattgttgtcctttaggt
gtgacactgtcagaatcccaggcagaaaaccatgccagcactgccaccagcccctccacc
aagacccttgatagtcagggagaagtatttgagaacactcttgtagaaactggtctacct
gttccaactgaattgaacatgggaagtgttgagactgcaagtgacaatgccatttcttcc
catcaaaatgatgagggaacaactgaaatttcttccgccagaaacttaccatcatacccc
gacacaaaggcagtaaatgagtacttgaagaaattgtcagatcattcaataaaggaggac
tcagagaagggtgaaaaaacaccaccacctcagcctcttgtagaagaagcagttcctaat
cttcacagcccaccaaccacaagcacctcagccctcaacagtttggtggtctcttgtgca
tctgctgttggtgtgagagtggcagctacatatgaagctggagccttgtctctaaagaaa
gttatcaacttttataatgcagccccgtgtgaaactggaattcagacaggccctgaaact
ctgaaagatagtagagaagaacaggttaaacaggaatcaatgcaaggaaagaaaagttca
agtctcgtggatatcagagaggaagaatctgagggaggcagtcgcagactctccctccct
ggattgctgtcacaagtttcccccaggctcttaagaaaggctgctcgggtgaaaacgaga
acagtggttctgacccccacatacagtggagaggcagatgcacttctgccttctctgaga
actgaggtgtggacctggggaaaagggaaggaggggcagctggggcatggcgacgtgctg
cccagacttcaaccattgtgtgtcaaatgtctggatggtaaagaaatcatctatctggag
gcaggtagttaccattctcttgcacttactgcaaaatctcaggtttactcatggggaagc
aatacctttggtcagcttgggcattctgattttccaacaacagttcctcgacttataaag
ttaagcagtgaaaatggagtctggaatgtagctgcaggccaggattattccctgttttta
gtggatacagaagatttccagcctggattgtattacagtggccgacaggaccctgaagaa
ggtgccagtcttccagagaatcctagtggtactaagactccaatacttctctcttgtagc
aagcttggatatataagcagagtaacggcaggaaaagataactatcttacattggtagac
aaaaacattatggggtatatcgccagtctccatgagttggctactacagaaagacggttc
tattcaaaactaagtgatatcaagtctcagatactcaggcctcttctcggtttagaaaat
ttgggtactgtgactacagtccaactgttgcaggaggtggcaagccgattcagcaagctg
tgttacttaattggccaacatggagcctcactgagtagcttccttcaaggggtaaaggca
gccaggagtttggtcattctgaagcatgcaagtctcttcttggatagttatacagagtat
tgtatatcaattacaaatttcctggttatgggtggattccaacttcttgctaagcctgcc
attgatttcctaaataaaaaccaggaattgttgcaagatttatcagaggtgaatgatgaa
aatactcaattaatggaaatactgaatacattgtttttcttgccaatcagacgacttcat
aattatgcaaaagttttgctaaagcttgctacttgctttgaagtgacatctccagagtat
cagaaactgcaggattccagttcttgttacgagtctcttgctctccatctcggcaggaaa
agaaaagaagcagagtatacattgggtttctggaagacctttccaggaaaaatgacggat
tccttgaggaagccagagcgccggctgctgtgtgagagcagtaaccgagccctctctctg
cagcatgctggcaggttttctgtgaattggttcattctctttaatgatgccctcgtccat
gcccagttctccacacaccatgtattccctttggccacactgtgggcagagccactttct
gaagaagctggaagtgtgaatggcttgaagataactacccctgaagagcagtttactctc
atatcatcaacaccccaggaaaagactaagtggttacgggctctaagccaagctgtggat
caggctttgagggggacttctgaccttccaccttatggaagtagcagcagtgttcagagg
caggaaccacccatttcacgcagtgccaaatatactttctacaaggatccccgcctaaag
gatgccacttacaacgggcgctggctctcaggaaagcctcatggaagaggggttttgaag
tggcctgatggaaagatgtacactggcatgttcaggaatggcttggaagatgggtatgga
gaatacagaatcccaaacaaggttctgaacaaagaagatcattatgtgggccactggaaa
gaaggaaagatgtgtggccaaggtgtctatagttacgcctctggtgaagtatttgaaggc
tgttttcaagataacatgcgtcatggtcatggtctcctccgaagtggaaaattaacttct
tcttctcccagcatgttcattggccagtgggtgatggataagaaatcaggatatggtgtc
tttgatgatatcacaaggggagaaaaatatatgggaatgtggcaagatgatgtatgccag
gggaatggagtggtagttacccagtttggattatattatgaaggcaacttccacgttaat
aaaatgatgggaaatggggttttactttctgaagatgacactatctatgagggagaattt
tctgatgactggactctaagtggaaagggaacactgactatgccaaatggagattacatt
gaaggctattttaatggagaatggggatctgggataaaaattactggaacttacttcaaa
cctagtctgtatgagactgataaagacagacccaaagttttcaggaagctagggaacttg
gcagtgccaccagatgagaagtggagagcagtgtttgatgagtgttggcatcagctgggc
tgtgagagcccaggccaaggggaagtttggaaagcatgggataatattgctgtggctttg
accatcaatcggcgccagcacaaagacagtccagaaatattaagtcgttcacagactcag
acactagagagtttggaattcattccccaacatgttggtgccttctctgtggagaaatat
gaagacattaagaaatatttaataaaggcctgtgacactccactgcatccactgggcaga
ctggtggagacactagtcgcagtatatagaatgacatacgtaggtgtaggagccaaccgt
cgactactgcaggaggcagtaaaggagattaagtcataccttaagcgacttttccagcta
gtgaggttcttatttcctgaacttcctgaagaaggaagtacaattcctctctctgctcct
ctgccaactgaaaggaaatcattttgcactgggaagtcagattccagatctgaatcgcca
gagccaggttacgtcgtaacaagttctggattactgcttcctgtgctactacctcggctc
tacccaccattgttcatgctctatgccttggataatgatcgtgaggaagacatttattgg
gaatgtgttctgcgtttaaataaacagacagatattgctctcttgggctttcttggagtt
cagaagaaattttggccagtgaccttgtcaatccttggagagagtaaaaaggttttacca
actacgaaagatgcttgttttgcttcagcagtagaatgcctgcagcagatcagcacaacc
tttaccccatcagacaaacttaaggtcatccagcagacttttgaagagatctctcagaac
gtcctggcatcactccaggaagacttcttatggtccatggatgaccttttccccgttttc
ttatatgtggtgctacgggccaggattaggaatttaggctctgaggtgcacctcattgag
gacttgatggacccctatcttcagcatggggaacaaggtataatgttcaccaccttgaag
gcatgttactaccagattcagcgtgagaagcttaactaa
DBGET
integrated database retrieval system
