Dipodomys merriami (Merriam's kangaroo rat): 138809528
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Entry
138809528 CDS
T11079
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04613
Neutrophil extracellular trap formation
dmer05034
Alcoholism
dmer05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
138809528 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
138809528 (Hdac9)
09165 Substance dependence
05034 Alcoholism
138809528 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138809528 (Hdac9)
Enzymes [BR:
dmer01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138809528 (Hdac9)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138809528 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
PNRC
Motif
Other DBs
NCBI-GeneID:
138809528
NCBI-ProteinID:
XP_069852237
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MSSPVQPDGVAAREQLLAQQRMHSRISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDP
VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ
QELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSA
TKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLR
KTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVTSFKKRMFEVTESSVSSSSPGSGPSS
PNNGPTGNVTENETSVLPPTPHAEQLVSQQRILLHEDSMNLLSLYTSPSLPNITLGLPAV
PSPLSASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHAHVALEGKPNSSHQALLQH
LLLKEQMRQQKLLVTGGVPLHPQSPLATKERISPGIRGSHKLPRHRPLNRTQSAPLPQST
LAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQVDQAMQED
RAPSSDTSTRSDSSTCVDDTLGQVGAVKVKEEPVDSDEDTQIQEMESGEQAAFMQQQPFP
EAPHTRALSGRPAQLAVVGMDGLEKHHRLLSRTQSSPAASMLPLPAVDHPLQPGSATGIA
YDPLMLKHQCICGSSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLIHSE
HHSLLYGTSPLDGQKLDPRILLGDDSQKYFSSLPCGGLGVDSDTIWNELHSSGAARMAVG
CVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILI
VDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTG
GLDPPMGDVEYLEAFRTVVMPVAKEFDPDVVLVSAGFDALEGHTSPLGGYKVTAKCFGHL
TKQLMTLAHGRVALALEGGHDLTAICDASEACVNALLGNELEPLAEDTLHQSPNMNAVAS
LQKIIEIQSKYWKSVRMVAVPRGCALPGTQLQEETETVSALASLTVDVEQPFAQEDSRAA
CEPMEEEPAS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccagtgcagccagatggggtggctgcgcgggagcaactcctggctcagcaa
agaatgcacagtaggatcagctcagtggatgtgaagtcagaggtccctgtgggcctggag
cccatctcacctttagacctaaggacggacctcaggatgatgatgccagtggtggaccct
gttgtccgggagaaacaactgcagcaggaattacttcttattcagcaacagcagcaaatc
cagaagcagcttctgatcgcagagttccagaaacagcatgagaacttgacacgacagcat
caggctcagcttcaggagcacataaagttgcaacaggaacttctagccataaaacagcag
caagaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagag
aggcatcgcagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaaaga
gctgtggcaagcacagaagtaaagcagaagcttcaagaattcctgttgagtaaatcagca
acaaaagacactccaactaatggaaaaaatcattccgtgagccgccatcccaagctctgg
tacacggctgcccaccacacatctttggatcaaagctcaccaccccttagtgggacctct
ccatcctacaaatacaccttgccaggagcacaagatgccaaggatgatttcccactccga
aaaactgcctctgagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagag
aggagaagcagtcccttactcaggcggaaggatggaaatgtcacttcattcaagaagcga
atgtttgaggtgacagaatcctcagtcagtagcagttctcctgggtctggtcccagttca
ccaaacaatgggccaactggaaatgttactgaaaatgaaacttcagttttgccccctact
cctcatgctgagcaactggtttcacagcagcgcatcttactccacgaagattccatgaac
ctgctaagtctctatacctctccttctttgcccaacatcaccttggggctgccggcagtg
ccctcgccactcagtgcttcaaattcacttaaagaaaagcaaaagtgtgagacacagacg
ctcaggcaaggtgttcctcttcctggccagtacgggggcagcatcccagcctcatcaagc
catgcgcatgtcgccctagaggggaagcccaacagcagccaccaggctctcctgcagcat
ttattactgaaagaacaaatgcgacaacaaaagcttcttgtgactggtggcgtcccctta
catcctcagtctccattggcgacaaaagagagaatttcacctggcattcgaggttcccac
aaattgccccgtcacagacctctgaatagaacccagtctgcacctttgcctcagagtaca
ttggctcagctggtcattcagcagcaacaccagcagttcttggagaagcagaaacaatac
cagcagcagatccacatgaacaaactgctttcgaaatctattgaacaactgaagcaacca
ggcagtcaccttgaggaggcagaggaagagcttcaggtcgaccaggcgatgcaggaagac
agagcgccctctagtgacaccagcactaggagcgacagcagtacttgtgtggatgataca
ctgggacaagttggggcggtgaaagtcaaggaggaacccgtggacagtgatgaagatact
cagatccaggaaatggaatctggggagcaggctgcttttatgcaacagcagcccttcccg
gaggccccgcacacacgtgcgctctcagggcgcccggctcagctggctgtggttggcatg
gatggattagagaagcatcatcggctcctctccaggactcagtcttcccctgctgcctcc
atgttacctctcccagcagtggaccaccccctccagcctggctcagcaactggaattgcc
tatgatcccctgatgctgaagcaccagtgcatttgtggcagttccaccacccacccagag
cacgctggaagaatacagagcatctggtcacggctacaagaaactgggctgctaaataaa
tgtgagcgaattcaaggtcgaaaagccagcctggaggaaatacagcttattcattctgaa
catcactcactgttatatggcaccagccccctggatggacagaagctggaccccaggata
cttctaggtgatgattctcaaaagtatttttcctcattaccttgtggtggactgggggtg
gacagtgacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggc
tgtgtcatcgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgtt
gtgaggcccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaat
tcagttgcaattacagccaagtacttgagagaccaactaaatataagcaagatattgatt
gtagatctggatgtgcaccatggaaacggtacacagcaggccttttatgctgaccccagc
atcctgtacatttcactccatcgctatgatgaagggaactttttccctggcagtggagcc
ccaaatgaggttggaacaggccttggagaagggtataatataaatattgcctggacaggt
ggccttgatcctcccatgggagatgtggagtaccttgaagcattcaggactgtcgtaatg
cctgtggccaaagagtttgatccagatgtggtcctggtttccgctggatttgatgcgttg
gaaggccacacctctccattgggggggtacaaagtgactgcaaaatgctttggtcacttg
acgaagcaattgatgacattggcccatgggcgtgtggcgctggctctggaaggaggacac
gacctcacagccatctgtgatgcatcagaagcctgcgtaaatgcccttctaggaaatgag
ctagagccgcttgctgaggacactctccatcaatccccaaacatgaatgctgtcgcttct
ttacagaagatcattgaaattcaaagcaagtactggaagtcagtaaggatggtggctgtg
ccaaggggctgtgctctgcctggtactcagttgcaagaggagacagagaccgtttctgct
ctggcctccctcacggtggatgtggaacaaccctttgctcaggaagacagcagagctgct
tgtgagcccatggaagaggagccggcctcatga
DBGET
integrated database retrieval system
