KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138809642
Entry
138809642         CDS       T11079                                 
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer02010  ABC transporters
dmer04976  Bile secretion
dmer05206  MicroRNAs in cancer
dmer05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    138809642
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    138809642
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    138809642
  09162 Cancer: specific types
   05226 Gastric cancer
    138809642
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dmer02000]
    138809642
   04147 Exosome [BR:dmer04147]
    138809642
   04090 CD molecules [BR:dmer04090]
    138809642
Enzymes [BR:dmer01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     138809642
Transporters [BR:dmer02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    138809642
Exosome [BR:dmer04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138809642
CD molecules [BR:dmer04090]
 Proteins
  138809642
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 RsgA_GTPase AAA_22 Rad17 AAA_5 Zeta_toxin AAA G-alpha AAA_14 AAA_29 AAA_7 APS_kinase AAA_30 AAA_15 DUF815 nSTAND1 nSTAND3 NTPase_1 DUF2207_C
Other DBs
NCBI-GeneID: 138809642
NCBI-ProteinID: XP_069852497
LinkDB
Position
Unknown
AA seq 1274 aa
MDSTKDGDGAGKNSELNKKSKKKEKKPTVSTFAMFRYAGWLDRLYMILGTLAAVIHGAAL
PIMMLVFGDMTDSFANAGSNLPNATQSNLYFNKTDILEKLEQDMTKYAYYYTGIGAGVLV
AAYIQVSFWCLAAGRQINKIRKEFFHAIMKQEIGWFDVHDVGELNTRLTDDVSKINEGIG
DKIGLFFQAMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAALWAKILSSFTDKELLAY
AKAGAVAEEVLAAIRTVIAFGGQSKELERYNKNLEDAKRIGIRKAITANISIGAAFLLIY
ASYALAFWYGTSLVLSNEYSIGQVLTVFFSVLIGAFSIGQATPNIEAFANARGAAYEVFK
IIDNKPSIDSFSTSGHKPDTIKGNLEFRNIHFSYPSRKEVKILKGLNLKVQSGQTVALVG
NSGCGKSTTVQLIQRLYDPTEGVVSIDGQDIRTINVKYLREIIGVVSQEPVLFATTIAEN
IRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFETLVGERGAQLSGGQKQRIAIARALVR
NPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVIAGFDDGVIV
EKGNHDELMREKGVYYKLVTMQTGGNEIELENDLYGPNGETHNVDMSSKDSRSSLLRRKS
SRRSIHGPQDEERKPSTKEEALDENVPPVSFWRILKLNLTEWPYFVVGIFCAVINGGLQP
AFSIIFSKIVGVFARDDDPETKRNNSNLFSLLFLILGIISFITFFLQGYTFGKAGEILTR
RLRYMVFRSMLRQDVSWFDNPKNTTGALTTRLANDAAQVKGATGSRLAVITQNIANLGTG
IIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGHALKDKKELEGSGKIATEAIENFRT
VVSLTREQKFEQMYSQGLQVPYRNTLKKAHIFGITFSFTQAMMYFSYAACFRFGAYLVAR
ELMVFEDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHVIMLIEKVPEIDSYSTDGL
KPKVLEGNVTFNDVKFNYPTRPDIPVLQGLSLQVKKGQTLALVGSSGCGKSTVVQLLERF
YDPLAGTVLLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRIVSQDEIM
RAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSAL
DTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEYGTHQQLLAQKGI
YFSMVSVQTGVKRQ
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggactccacaaaagacggcgatggagcagggaagaactcagagctcaacaaaaagagt
aagaagaaggaaaaaaaaccaactgtcagtacatttgcaatgtttcgctatgcaggttgg
ctcgacaggctgtatatgatcctgggaactttggctgctgttatccatggagctgcactc
ccaatcatgatgctggtatttggagacatgacagatagctttgcaaatgcaggaagtaat
ttgccaaatgctactcaaagtaatctctatttcaacaaaactgatatcctggaaaaattg
gaacaagacatgaccaagtatgcctattattacactggaattggtgctggcgtgcttgtt
gctgcatacattcaggtgtcattttggtgcttggcagctggaagacaaattaataaaatt
aggaaagagttttttcatgctataatgaaacaagagataggctggtttgatgttcatgac
gtgggagagcttaacacccggctcacagatgatgtctccaaaattaatgaaggaattggt
gacaagattggattgttctttcaagcaatggcaacatttttcactggttttatagtagga
tttacacgtggctggaagctaacccttgtgattttggccatcagccctgttcttggactg
tcagctgctctatgggcaaagatattatcttcatttactgacaaagagctcttggcatat
gcaaaagctggggcagtagctgaagaagtcttagcagccatcagaactgtgattgccttt
ggtggacaaagcaaagaacttgaaaggtacaacaagaatctagaagacgcaaagagaatt
gggataaggaaagctatcacagccaacatttccatcggtgctgctttcctactgatctat
gcatcgtatgctctggctttctggtatgggacctccttggtcctctccaatgaatattct
attggacaagtgctcactgtcttcttttctgtattaattggggcatttagtattggacag
gcaactccaaacattgaagcatttgcaaatgccagaggtgcagcttatgaagtcttcaag
atcattgataataagccaagcatcgacagcttctcaacaagtggacacaaaccagatact
atcaagggaaatttggaattcagaaatattcatttcagttacccatctcgaaaggaagtt
aagatcttgaagggactcaacctgaaggtgcagagtggacagacagtggccctggttggg
aacagtggctgtgggaagagcacgacagtgcagctgatccagaggctctatgatcccaca
gagggcgtggtcagtattgatggacaggacattaggaccataaacgtgaaatatctgcgg
gagatcattggtgtggtgagtcaggaacccgtgttgtttgccaccacaatagcagaaaac
attcgctatggtcgtgaaaatgtcaccatggatgagattgagaaagctgttaaggaagcc
aatgcctatgacttcatcatgaaactgccccataaatttgagaccctggttggagagaga
ggggcccagctgagtggtggacagaagcagagaatcgccatagcacgtgccctggttcgc
aaccctaagatcctcctgctggacgaggccacatcggccttggacacagaaagtgaagct
gtggttcaggtggctctggataaggccagagaagggcggaccaccattgtgatagctcat
cgcttgtctacagttcgtaatgctgatgtcattgctggttttgatgatggtgtcattgtg
gagaaaggaaatcacgatgaactcatgagagagaaaggagtttactacaaacttgtcaca
atgcagacaggaggaaatgaaattgaattagaaaatgacctttatggacctaatggtgaa
actcataacgttgatatgtcctcaaaagactcacgatccagtctattaagaagaaaatca
agtcgcagaagtatccacggtccacaagacgaagaaagaaagcctagtacaaaagaggag
gccctggatgaaaatgtacctccagtttctttctggaggattctaaaactgaatttaact
gagtggccatattttgtggttggtattttttgtgctgttataaatggaggcctacaacca
gcattttcaataatattttcaaagattgtaggggttttcgcaagagatgatgatcctgaa
acaaaacggaacaatagtaacctgttttcacttttatttctcatccttggaattatatca
tttattacatttttccttcagggctacacatttggtaaagctggagaaatcctcaccaga
cggctacggtacatggttttcagatccatgctgagacaggatgtaagctggtttgataac
cccaaaaataccactggagctttgaccaccaggcttgccaatgatgctgcacaagtaaaa
ggggctacaggttccagacttgctgtaattactcagaatattgcaaatcttggaacagga
atcattatatccttaatctatggctggcaattgacacttttgctcctggcaattgtgccc
atcattgcaatcgcaggagttgttgaaatgaaaatgttgtctggacatgcactaaaagat
aagaaagagctagaaggctctgggaagattgccactgaagcaatagaaaacttccgaact
gtggtttctttgactcgggagcagaagtttgaacagatgtattcccagggtttgcaggta
ccatacagaaatactctgaagaaagcacacatctttggaatcacgttctccttcactcag
gcaatgatgtacttttcctatgctgcctgtttccggtttggcgcctacttggtggcccgt
gagctgatggtatttgaagatgttctattagtcttttcagctattgtctttggcgccatg
gcagttggacaggtcagttcctttgctcctgactatgccaaagccaaagtgtcagcatct
catgtcatcatgctcattgaaaaagtccctgagattgacagctacagtacagatggacta
aagccaaaggtgttagaaggaaatgtgacctttaatgacgtgaagttcaactatcccacc
cggccagacatcccagtgcttcagggactgagtctgcaggtgaagaagggccagacgctg
gctctggtgggcagcagcggctgtgggaagagcacggtggtgcagctcctggagcgcttc
tatgacccattggccggcacagtgcttctggatggcaaggaaataaagcagctgaacgtg
cagtggctccgagcacacctgggcattgtgtcgcaggagcccatcctgtttgactgcagc
attgctgagaacatcgcctatggagacaacagccggattgtgtcccaggatgagatcatg
agggcggccaaggaggccaacatacaccagttcattgactcactgcctgataagtacaac
accagagttggagataaaggaactcagctgtctggtggtcagaaacagcgcattgccata
gctcgtgccctggttaggcagcctcatattttgcttttggatgaagccacatcagctcta
gatacagaaagtgaaaaggttgtgcaagaagccctggacaaagccagagaaggccgcacg
tgcattgtgatcgctcaccgcctgtccaccatccagaatgcagacctaattgtggtgatc
cagaatggcaaagtcaaggagtatggcacccaccaacagctgctggcacagaaaggcatc
tatttttccatggtcagtgtccagactggagtgaagcgccagtga

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