Dipodomys merriami (Merriam's kangaroo rat): 138810375
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Entry
138810375 CDS
T11079
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04270
Vascular smooth muscle contraction
dmer04360
Axon guidance
dmer04611
Platelet activation
dmer04625
C-type lectin receptor signaling pathway
dmer04810
Regulation of actin cytoskeleton
dmer05135
Yersinia infection
dmer05152
Tuberculosis
dmer05163
Human cytomegalovirus infection
dmer05200
Pathways in cancer
dmer05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138810375
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
138810375
04625 C-type lectin receptor signaling pathway
138810375
09153 Circulatory system
04270 Vascular smooth muscle contraction
138810375
09158 Development and regeneration
04360 Axon guidance
138810375
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138810375
05205 Proteoglycans in cancer
138810375
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
138810375
09171 Infectious disease: bacterial
05135 Yersinia infection
138810375
05152 Tuberculosis
138810375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138810375
Membrane trafficking [BR:
dmer04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
138810375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
138810375
NCBI-ProteinID:
XP_069853529
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSAIGHMSPIMSSPHSPG
ASGNMERITSPVLVGEENNVVHNQKVEILRKMLQKEQERLQFLQEDYNRTPAQKLLKEIQ
EARKHIPQLQEQLSKATGSAQDGAVVTPSRPLGDALTVSEPDMDPGDGPYRTDWSGGDTS
RPGSDNADSPKSGLKERIYLEENPEKSESIQDIDAPSLVSSPSTRVAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRAAHLKVSVPEEISVDLEKRRPELIPEDLHRHYIQTMQEKVHPEVQRHL
EDFRQKRSMGLTLADSELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQATEEEK
SSTMQYVILMYMKHLGVRVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKARHPKHMSTASSVSLDPQDSAKLRQTGSANEGADAGF
LPANPMSSVVSGAALPQEGGKENDMGSKQVGETPVSGDSLDGTPRPANTVFDFPPPPLDQ
VQEEECEVERVTEHGTPKPFRKFDSTAFGESQSEDEQFENDLETDPPSWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSEIRKIFSNLEDILQ
LHIGLNEQMKAVRKRSETSVTDEIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPESHPCEGDNDEEEPPRLEVERRDISAPGQQSPDRDLGLEPPLISSKPQCHSLSPG
EKSEADEVFVTAAQLAKEQCAEALKESGGSHELTHADPHLLVSNERWALDALRNLGLLKQ
LLVQQFVLTEKSLQEDWQHFPSHKPVSQGVQADGGVQNSEHIKAINPGDGQVSFTTGTGD
FATCRSPRTSTESSAPPDSVVLASQESQASNILVMDHMILTPAAPATESEGGPDESGEHF
FDAREAHGEDNLPEGDGAETKEEKDVTLRISGNCLILDGYEAVQESSTDEEVMSSFALQP
GLGLPSADSPHLQHPSPQSAHSDGAASPFTPEFLGRRRWGTLEGSCFEIQSPCCTDSQSQ
ILEYIHKIEADLEHLKKVEESYCILCQRLAGSALTEKHSDQS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgaacgcagtaca
tcacatgattttgaccctacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatcggagatatatggtcttgttcagcggtgtgtgatcatccagaaagatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggtgtgcagacaggtgatcggatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaggtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccccttgctgattctgaa
gtagagccatccgccattggacatatgtctcccatcatgtcttcccctcattcacctgga
gcatctgggaacatggagaggatcaccagtcctgtgctggtgggggaagaaaacaatgtg
gttcataaccagaaagtagaaatcttgagaaaaatgttacagaaagaacaggaacggcta
cagttcttgcaggaagactataaccgaacacctgcccagaagttgctaaaagagatccaa
gaggccaggaagcacattcctcagctacaagagcagttatccaaagccacaggctctgcg
caggatggagctgtagtaacaccttccaggcctctaggggatgccctaacagttagtgaa
ccagacatggatcctggagatggaccttataggactgattggagcggtggagatacttct
cggcctggcagtgacaatgcagatagtcctaagagtggtctgaaggagaggatttatctg
gaggaaaacccagagaaaagtgaatcaattcaggacattgatgctccatcgctcgtcagc
agtccttcaacccgtgtcgcacctcatatcattggggcagaggatgatgattttggtact
gaacatgaacagatcaatgggcagtgcagctgcttccagagcattgaactgctgaaatct
cgccctgctcacttggctgttttcttacaccacgtagtttcacaatttgaccccgcaaca
ttgctctgttacctctactcagacctgtataaacagactaattcgaaggaaactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgggctgcgcacctgaaagtctctgtt
cctgaggaaatatctgtggatctagaaaagagaagacctgagcttattcctgaggatcta
catcgccactatatacaaactatgcaagaaaaagtccaccctgaagttcagaggcacttg
gaagattttcggcagaaacgcagtatggggctgaccttggctgacagtgagctgactaaa
cttgatgcagagcgagacaaggaccgggtaactctggagaaggaacgggcatgtgcagag
cagatcgttgctaaaattgaagaagtattgatgactgctcaagctacagaagaagaaaag
agttccacaatgcagtatgtgattctcatgtatatgaagcatttgggagtcagagtgaaa
gaacctcgaaatttggagcacaagcggggtcggattggattcctcccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgaagagaaaggcaagcggaggggattccccagcatc
ctgggacctccaaggagaccaagccggcatgataacagtgcaattggcagggccatggaa
ctacagaaagcacgccaccctaagcacatgtccacagcctcatctgtgagtcttgaccct
caggattcagccaagttgcgccagactgggtcagccaatgaaggagcagatgctggattc
ctgcctgccaatcccatgtcctctgtggtttcaggggctgctctcccccaggaaggaggg
aaagagaatgacatgggatcaaaacaagttggagaaacaccagtatctggagactccttg
gatggcacacctcggcctgccaacactgttttcgatttcccacctcctcccttagaccaa
gtgcaggaggaggaatgtgaagtggaaagagtgacagaacatggaacaccaaagcccttt
cgaaagtttgacagcacagcctttggagaaagtcaaagtgaggatgagcaatttgaaaat
gacctggagactgacccacccagctggcagcagcttgtcagccgagaagtgttactggga
ctgaaaccctctgagatcaaaagacaggaagtgattaatgaattgttctacacagaaaga
gctcatgtccgaacactgaaggttcttgatcaagtgttctatcagcgagtgtccagggaa
ggaattctgtcaccttcagagatacggaagattttttcaaacctggaagatattcttcaa
cttcacattgggttgaatgagcaaatgaaggctgttcgaaaaaggagtgagacctctgtg
acagatgaaattggagaagatttactcacctggttcagtggaccaggagaggagaagttg
aaacacgctgctgctaccttttgcagcaaccagccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcggttccagacttttgtgcaagatgctgagagtaaccctctg
tgtcgccgccttcagctgaaggacatcattcccacccagatgcagaggcttacaaaatac
ccacttcttctggataacatcgccaagtacacagaatggccaacagaaagggaaaaagtg
aagaaagctgcggatcactgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaagcagcgcctagaagattatcagcgtcgccttgatacctccaatctcaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacgaaaagaaagatg
attcatgaagggcccttggtttggaaggtgaatagagataaaagtatcgatctatataca
ttgctgctggaagacatccttgtattgctacagaagcaggatgatagactggtgctgagg
tgtcacagcaagattctggcatccacagctgacagtaaacacactttcagtcctgtcatc
aagctgaacacagtgttagttcgacaagtggcaacagataacaaagccttattcgtcatc
tccatgtcagacaatggagcccaaatttatgaattggtggcacagacagtttctgaaaag
actgtctggcaggaccttatctgccgaatggctgcgtcagtgaaggagcagtctacgaag
ccgatccccctcccggagtcacacccgtgcgaaggagacaatgatgaggaagaaccaccc
agattagaagtggagcgccgtgacatctcagcccctggccagcagagcccagatagagat
ttgggtctagaacctcccttaatctcatcaaaacctcagtgtcattcactgagtcctggt
gagaagtcggaggcagacgaagtgtttgtgactgcagcacagctggcaaaggagcagtgt
gcagaggccctgaaggaaagtggagggagccatgagctcacgcacgcagatccacacctg
ctggtctcaaatgagcggtgggctctggatgcactcaggaatttgggtttgttgaagcaa
ttgctggtacaacagtttgtcttgaccgagaagagccttcaggaggactggcagcacttc
ccaagccacaagccagtgtctcagggggtgcaggcagatggtggagtccagaactcagaa
cacatcaaggccattaatcctggtgatggacaggtgtcctttacaactggaactggtgac
tttgccacttgtcgcagtccacggacttcaactgaatcttctgctcccccagattcagta
gtgttggcatcccaagagagccaggcaagtaacattttagtaatggaccacatgattctg
accccagcagcaccggccacggagtcggaagggggtcctgatgagagtggagagcacttt
tttgatgcccgtgaagcccatggtgaggataacctaccagaaggcgatggagcagagacg
aaggaggagaaggatgttaccttacgcatctcaggaaactgtttaatcctcgatggctat
gaagcggtgcaggagagctccacagatgaggaggtcatgtcgtccttcgccctgcagccc
ggactgggcctgccctctgcggactccccccacttgcagcacccctctccccagagcgct
cattctgatggggcagcttcaccattcaccccggaattcctgggccgtcggcgctggggg
actctggagggctcctgttttgagatccagagtccctgttgtacagattcacagagtcag
atcctggaatatattcataagatagaggctgaccttgaacacctaaagaaggtggaggaa
agctactgcattctttgccaaaggctggctggctcagccctcacagaaaagcactcagat
caaagttaa
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integrated database retrieval system
