Dipodomys merriami (Merriam's kangaroo rat): 138810666
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Entry
138810666 CDS
T11079
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03008
Ribosome biogenesis in eukaryotes
dmer03013
Nucleocytoplasmic transport
dmer03015
mRNA surveillance pathway
dmer05014
Amyotrophic lateral sclerosis
dmer05164
Influenza A
dmer05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138810666
03015 mRNA surveillance pathway
138810666
03008 Ribosome biogenesis in eukaryotes
138810666
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138810666
05168 Herpes simplex virus 1 infection
138810666
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138810666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138810666
03009 Ribosome biogenesis [BR:
dmer03009
]
138810666
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138810666
mRNA cycle factors
Stress granule specific factors
138810666
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138810666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
138810666
NCBI-ProteinID:
XP_069853940
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGGNRRSGRGGSGIRTSRLEEDDGDVA
MSDAQDGPRVRYNPYATRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWF
KITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVKDASTASALKAVNYKIQ
DRENRRISIIINSSAPPLTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG
NELKSERELDKIKGLKLEELWLDGNALCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDVEAPTMLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI
PFIPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNAS
PEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTHLKAKGKIPEVAFMK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcgtacaacgagcatgatgaccgtgttagtttccctcagaga
agaaagaagggccggggtcctttccgttggaagtatggtgaaggagggaaccgtcgatct
gggagaggcggttctggtattcgaacttcccgacttgaggaggatgatggagacgtggca
atgagtgatgcccaggatggtcctcgagttcgatacaacccctatgccacccgacctaac
cgtcggggtgatacttggcatgatcgggatcgaattcatgttactgtacgaagggacaga
gctcctccagagagaggaggggcgggcaccagccaagatgggacttcaaaaaactggttc
aagattacaattccttacggcagaaagtatgacaaggcatggctcctgagcatgattcag
agcaaatgcagcgtcccttttacccccattgagtttcattatgagaacacacgggcccag
ttctttgtgaaggacgccagtactgcttctgctttaaaggctgtcaactataagatccag
gatcgagagaaccgaaggatatctatcatcatcaattcctctgctccaccccttactgtt
cagaatgaattgaagcctgagcaagtagagcaactcaagctgattatgagcaaacgatat
gatggttcccagcaagctcttgacctcaagggtctccgttcagacccagatttggtggcc
caaaatattgatgttgtcctgaatcggagaagctgcatggcagctaccctacggatcatt
gaagagaacatccccgagctattgtctttgaacttgagcaacaacaggctatatagactg
gatgacatgtccagcattgtgcagaaggcacccaacctgaagatcctaaatctctctgga
aatgaattgaagtctgagcgggagttggacaagataaaagggctgaagctagaagagttg
tggcttgatggaaatgccctgtgtgacacattccgagaccaatccacttacatcagcgcc
attcgcgaacgatttcccaagctattacgcctggatggccatgagttacccccaccaatt
gcctttgatgttgaagcccccacgatgttaccgccctgcaagggaagctattttggaaca
gaaaacctgaagagtctggtcctgcacttcctgcagcagtactatgcaatttatgactct
ggagaccggcaggggctcttggatgcctaccatgatggggcctgctgctcactgagcatt
cctttcatcccccagaatcctgcccgaagcaacttggcagagtacttcaaggacagcaga
aatgtgaagaagctaaaagaccccaccctgcggttccgtctactgaagcacacacgtctc
aacgttgttgccttccttaatgagttgcccaaaactcagcatgacatcaattcctttgtg
gtagacataagtgcccagacaagtacattgctgtgtttttctgtcaatggggtcttcaaa
gaagtggatgggaaatctagggattctctgcgagcttttaccaggaccttcatcgctgtt
cctgccagcaattcagggctatgtattgtaaacgacgagctgtttgtgcggaatgccagc
cctgaagagatccaaagagccttcgccatgcctgcacccacaccttcctccagcccagtg
cccaccctgtccccggaacagcaggaaatgctgcaagcattctctacacagtctggcatg
aacctggagtggtcccagaagtgccttcaggacaacaactgggactatactagatctgcc
caggccttcactcatctcaaggccaagggtaagatcccagaagtggcattcatgaagtga
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