Dipodomys merriami (Merriam's kangaroo rat): 138810667
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Entry
138810667 CDS
T11079
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138810667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138810667
03036 Chromosome and associated proteins [BR:
dmer03036
]
138810667
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138810667
Coactivators
SAGA/TFTC/STAGA complex
138810667
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138810667
STAGA complex
138810667
TFTC complex
138810667
SAGA complex
138810667
SLIK complex
138810667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
138810667
NCBI-ProteinID:
XP_069853941
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MAEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKR
RKLTVEDFNRALRWSSVEAVCGYGSQEVLPMRPAREGELYFPEDREVNLVELALATNIPK
GCAETAVRVHVSYLDGKGNLAPQGSVPNAVSSLTDDLLKYYQQVTRAVLGDDPQLMKVAL
QDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVG
SVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKAQAAEPSRGGPGVRGCRRPDELPWDSLLLQESPSGGGAEPGFGPGLP
LPPGGAGPEDPTPSVTLADTYRELYAFFGDSLATRFGTGQPAPAAPRPPGDKKEPAAAPD
SVRKMPQLTASAMVSPQGDESPRGGGGGGPSASALASEGRPLPRVHRARGAPRQQGPGAG
TRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPMIG
RTGRPARRWALSDYSLYLPL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgagaagagcggcggtttgtggagatcccacgggagtcggtgcggctcatg
gccgagagcacaggcctggagctgagcgatgaagtggcagctttgcttgcggaggatgtg
tgctaccgtctccgagaggctacccagaatagctctcagttcatgaagcacaccaaacgg
cgcaagctgacggtggaggacttcaacagggccctcaggtggagcagtgtggaggctgtg
tgtggatatgggtcccaggaggtgcttcccatgcgccctgccagggagggtgagctctat
tttcctgaagaccgagaggtgaacctggtggagctggcactggccaccaacattcccaaa
ggctgtgctgagacggctgtcagagttcatgtctcctacctggatggcaaaggaaacctg
gcacctcaaggatcagtacccaatgcagtgtcttcactgacagatgacctgctcaagtac
tatcagcaagtaacacgggctgtgctcggggatgacccacagctgatgaaggtggctctg
caggaccttcagacaaactccaagatcgccgcgctcctgccttactttgtttatgtggtc
agtggggtgaagtctgtaagccatgacctagagcagctgcacaggctgctgcaggtggca
cgtagcctggttcggaacccacacctctgcctggggccctacgtccgctccctagtgggc
agtgtcctctactgtgtcctcgagccattagctgcctccatcaatcccctgaatgaccac
tggactctgagggatggagctgccctcctactcagccatatcttctggactcatggggac
ttggtgagtggcctctatcagcagatcctgctttccctgcagaaggtcctggcagaccct
gtgcggcctctctgctctcactatggtgctgtggttgggttgcatgctcttggctggaag
gcagtagaacgagtactgtacccacatctgtccacttactggacaaacttgcaggcagtg
ctggatgattattcggtgtctaatgcccaggtcaaggcagatggccacaaagtgtatggg
gccattctggtggccgtagagcgactgcttaagatgaaggcccaggcagctgagcccagc
cgcggcggccctggggtcaggggctgccggcgaccggacgagctgccgtgggacagcctt
ctcctgcaggagtcgccgtcggggggcggcgcagaaccaggctttgggcccggccttccg
ctgccgccgggaggcgcgggcccggaagacccgactccctccgtgaccctggcggacacc
taccgggagctctacgccttcttcggcgacagcttggccacccgcttcggcaccggccaa
cccgcgcccgcggccccgcggccgcccggggacaagaaggagccggctgccgccccagac
tcggtgcggaaaatgccgcagctgacggccagcgccatggtcagcccgcagggtgacgag
agcccccggggcggcggcggcggcggcccgtcggcctcggcgctggcgtccgagggcagg
ccgctgcctcgcgtgcaccgggctcggggcgcgccgcgccagcagggccccggcgccggc
acccgcgacgtctttcagaagagccgtttcgccccgcgcggcgccccccacttccgcttc
atcatcgcggggcggcaggccgggcggcgctgccgcgggcgcctcttccagactgcgttc
cccgccccgtacgggcccagcccggcgtcccgctacgtgcagaagctgcccatgatcggc
cgcacgggccgcccggcccgccgctgggcgctctcggactactcgctgtacctgccgctg
tga
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