Dipodomys merriami (Merriam's kangaroo rat): 138810845
Help
Entry
138810845 CDS
T11079
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138810845 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138810845 (Taf5l)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138810845 (Taf5l)
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138810845 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
138810845 (Taf5l)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138810845 (Taf5l)
STAGA complex
138810845 (Taf5l)
TFTC complex
138810845 (Taf5l)
SAGA complex
138810845 (Taf5l)
SLIK complex
138810845 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
PROPPIN
PEP5_VPS11_N
Beta-prop_IP5PC_F
Ge1_WD40
WD_LRWD1
Nbas_N
vATP-synt_AC39
Mala_s_1-like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
138810845
NCBI-ProteinID:
XP_069854275
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQVQVAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANVVSA
APCQAEPQQYEIQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQSSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTVHIHLDVQPAKRTDYQLYASGSSSRSESSGLEPPEMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDSSCIKLWSLRST
KLKSEPHHVDASRIHLACDALEEEEDEDDSVGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
NTCCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtgcgcacggagcaagtccaggtggcagtgtcctgctacctcaagcgccgg
cagtacgtggactcagacggccccctgaagcaaggtctgcgactctcacagaccgctgag
gagatggctgccaacctcacagtccagtcagaatctggttgtgccaatgtggtgtctgca
gccccatgccaggcagaaccccagcaatatgaaatacagtttggacgactgcggagtttt
ctcacagactctgactcccaacacagccatgaagtgatgcctctcctctaccccctcttt
gtctacctccatctcaacctggtccagagcagcccaaagagcactgtggaaagcttctac
agccgcttccatgggatgttcctgcagaacgcaagccagaaggacgtcattgagcagctg
cagaccactcagaccatccaggacatcctgtccaacttcaagctccgggcattcctagac
aacaagtatgtggtccgtctccaagaagacagctacaactacctgatccgctacctccag
agtgacaacaacactgccttgtgcaaggtcctcactgtgcacattcacctggatgtgcag
cctgccaagaggacagactaccagctctatgccagtggcagctcctcccgcagtgagagc
agtggcctggagcccccagagatgcccagccctattctgcagaacgaagctgccttggag
gtcttacaggagagcatcaagcgtgtcaaggacgggcctccctccctcaccaccatctgc
ttctatgccttctataacacagagcagctgctgaacacggcagaaatctctcctgatagc
aagctgcttgctgctgggtttgacagctcctgcatcaagctgtggagcttgcggtccacg
aaactgaagtcagagccccaccatgtagacgcctcccgcatccacctggcttgtgacgct
ctggaggaggaggaggacgaggatgacagcgtgggcacagaaatgaagattctgcggggc
cattgtggaccagtatacagcacacggttccttgcagacagctctgggttgctgtcttgc
tctgaagacatgtctattagatattgggacctcgggagtttcaccaacactgtgttgtac
caagggcacgcctaccctgtgtgggacctggacataagtccgtatagcctgtactttgcc
agcggctcccatgaccgaacagccaggctgtggtcctttgaccggacgtatcccctgagg
atatatgcagggcacctggcagatgtggactgtgtcaaatttcaccctaactcaaactac
ctagccactggctcaactgacaagacagtccggctgtggagtgcccagcaggggaactca
gtgcgactcttcacagggcaccgtggccctgtgctctcccttgccttttctcccaatggt
aagtacttggcctctgcaggcgaggaccagcggctgaagctgtgggacttggcctctggg
actctttttaaagaattgagaggccacacagacagcatcaccagcctggccttcagccca
gacagcggcctggtcgcctctgcctccatggacaactctgtacgtgtctgggacatcagg
aacacatgctgcagtgcgcccgctgacggctcctccagtgagcttgtgggagtgtacaca
gggcaaatgagcaatgtcctgagtgtgcagttcatggcctgcaacctactgctggtgact
ggaatcacacaggaaaatcaagaacactga
DBGET
integrated database retrieval system
