Dipodomys merriami (Merriam's kangaroo rat): 138811046
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Entry
138811046 CDS
T11079
Symbol
Tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138811046 (Tdrd12)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
138811046 (Tdrd12)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138811046 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138811046
NCBI-ProteinID:
XP_069854649
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MLEILVLKVEDPGCFWVIIKGSGNFSDNEVDYQKLNSAMNDFYDHMCQDIEIKPLILEEG
QVCVVYCQELKCWCRAIIKSIVSSTDHYLAECFLVDFAKFIPVKSKNIRVAVESFMKLPY
RAKKFRLYCTKPVTLHIDLCEDSAQIVPAKKWDSAAIQYFQSVLRAATQVEAKLCAVEED
AFEVYLYATIKNEKVCVNDDLVAKNFAYYVSPMQNKKRDSLEKPTLSIKSTSLSNPAFTL
WPMLWQGKDFQAMKNSHGLNFLAQSLPHSWCKDVAGERGPTAVMLDKAMKCDRDPLRDSP
KRTCEAKQHCISLREGVESSVDWPTKRGITIYADPDIPAASALSQKPNEKPQRLAEKKDY
DEKNVCVKLLQFLNPDPLRIDGISDLQQLQRLTLGTQHPVMLFRNKIEPCLTIDKSPLSA
DLKKALQRKKFSGPSPTESYSWPPIARGCDVVVLSHSGNDPLLYLPPLLTVLQIGGCYKS
LPSRNGPLAVIVCPRWRKAQFIFDLLGDYNMSSRPLHPVLLTIGLHKDEAKNMKLPRGCD
VIITTPHSLLRLLTYQSLLFLRLCHLVLDEVEVLFSEANEQTFAILDNFRKNIEVEERES
VPHQVIAVGVHWSRHIEHLVQEFLNDPYIVITAPEEAALYGSVQQVVHLCLECEKTSTLL
QVLDFMPSQAQKTLIFTCSVAETEIVCKVVESNSVFCLKMHKELVFNLKSVLEQWKKKLS
SGSHIVLASTDDCIPLLAITDATCVVHFSFPASPKVFGGRLYCMSDHFQSFTQQGSPVEC
GDKKTKSVLLLTERNASHAVGVLRYLERADAKIPSELYEFCAGVLEAKEDKKARRPLCKH
LKAFGFCKDKRVCPDRHYVSTELDMPRKLSDQALPVYGYIQIIPSYISNATNYFGRIIDK
HEDLYVTLKAEMNEYFKDSSNKVAVEKVENLGLYGLEEKTLFHRVQVLEMSQKEDTGGLG
SILVTFLDEGRTGLVTKDQLLSLPESFRTLPPQAVEFIVCRVKPADGEMEWNPKVTRYIH
HKIVGKLHDAKVVLALGNTVWIDPMVHVTKLPNLKTSIIDYNVRAEILSTGMGIDNSEHV
QQLKLLCKGTDMPACDGGLGQTTVTSPEKEAAAVSGARQEDAQAPGKSTSSSSSSASASS
MTDSAHHSPDNLWEKADFEFYTESESAPTRDACATASAPPHQKSLHPQIKWFQKEDVVIL
KIQIRDVRDYRCKYFQDRVIFSASVGDKAYLADLELQANIVKDDCKCIIENHEPVITLTK
EKKEPWRGLLKHKVSPPGCGRPSAVPHLPAELYCCVAQNPNVTFDFDHWEDCEEDSPIAK
VAHSRSLWGKVAEVVKNSSSSSEDAGSESE
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatcctggtgctgaaggttgaagatccaggttgtttctgggttattatcaaa
ggatctgggaacttttcagataatgaagtcgactatcagaaattaaatagtgccatgaat
gatttctatgatcacatgtgtcaggatatagaaataaaaccattgatcttggaagaagga
caggtttgcgtggtctactgtcaggagctgaagtgttggtgcagggccattattaagtca
atagtttcttcaacagaccattatctggcagagtgcttccttgtggattttgccaagttt
ataccagtaaaatctaaaaatatcagagttgcagtagaatctttcatgaagcttccatat
agagccaaaaaattcagactttactgcacaaaacctgttacattacacattgacctctgt
gaagacagtgcacaaattgtccctgccaagaagtgggacagtgcagctattcagtacttc
cagagtgttctaagagcagctactcaggttgaggccaaattatgtgctgtggaagaagat
gctttcgaggtttacctctatgcaacaataaaaaatgaaaaggtttgtgtgaatgatgac
ttggtggcaaagaactttgcttattacgtgtcacctatgcagaataaaaagcgtgattct
ttggagaaaccaacactcagtataaagtccacgtccctttccaatccagcgtttactctg
tggccaatgctttggcaaggaaaagactttcaggcaatgaagaattcacatggtctcaat
tttctggcacaatctctcccacattcatggtgcaaggatgttgctggtgagcgagggcca
actgctgtgatgctggataaagctatgaaatgtgacagggatccgttgagagactcacct
aagaggacttgtgaagcaaagcagcactgcatctctctgagagaaggtgttgaatcgtca
gtggactggcctacaaagagaggcatcaccatatatgccgatccagatataccagcagca
agtgctttaagtcagaagccaaatgagaagccacagagattggcagaaaaaaaagactat
gatgagaaaaatgtctgtgtgaagttactgcagtttttaaatcccgatcctttgagaatc
gatggaatctctgatctacagcagttgcagaggttgacattgggcacacagcatcctgtt
atgttattccgaaacaagattgagccctgcctgacgattgacaagtcacccctgtctgca
gacctgaaaaaggctcttcaaagaaagaagttttcaggacctagccccaccgagtcttac
tcttggcctcccatcgcacgtggctgtgatgtagtggtcctttctcactctggaaacgat
cctctgttgtaccttccaccattactaacagttttgcaaattgggggctgctacaaatct
ttaccaagtagaaacgggcctctggccgtcattgtgtgccccaggtggaggaaggctcag
ttcatttttgatttgttgggagactacaacatgtcctccaggccccttcatcctgtctta
ctgacaatcggccttcacaaagatgaagccaagaacatgaagctgcctcgcgggtgcgac
gtaattattaccacaccgcacagcctcctgagactgctcacataccagagcctgctgttt
ctcagactctgtcacctggttttggatgaggtggaagtgttattctctgaggccaatgag
caaacatttgctatattagataacttcagaaaaaacattgaggtagaagaacgggagtct
gtaccccaccaggtcattgcagtcggcgttcactggagccgacacatagaacacctggtc
caggagttcctgaatgacccatacattgtgatcacagcccccgaggaggctgcactctat
ggcagcgtccagcaggtagtccatctttgcctggaatgtgagaaaacctcgactttactc
caagttcttgattttatgccaagtcaggcccagaagaccttgatctttacctgctctgta
gctgaaacagaaatagtgtgtaaggtagtagaaagcaactcagtattttgcttgaaaatg
cacaaagagcttgtttttaacttaaaaagtgtcttagaacagtggaagaagaagttgagt
tctggttctcacattgtattagcctctactgacgactgcatcccactcctggccatcact
gacgccacgtgcgtggtgcacttcagcttccctgcctcacccaaggtttttggaggacgt
ctttattgcatgtctgatcattttcaaagttttactcaacagggttcaccggtagagtgt
ggagataaaaaaaccaagtctgtcttgctgctgactgagaggaatgctagccacgcagtg
ggtgtcctgcgctacttggagcgagcagatgccaaaataccatcggagttatacgagttc
tgtgcaggggtcttggaagccaaagaggacaagaaagccagaagaccactctgcaaacac
ctgaaggctttcggcttctgcaaagacaaaagggtatgtcctgatcgacactatgtcagt
acagagctggacatgccaaggaagttgtctgaccaggctctgccagtgtatgggtacatc
cagataataccttcttacatttcaaatgcaacaaattactttggtcgtatcattgataaa
catgaggatctttatgtcactctgaaggcagaaatgaatgagtattttaaggattctagt
aataaagtagctgttgaaaaggtggagaacttgggattgtatggcttggaagagaagaca
ctttttcacagagttcaggttctggagatgagccagaaagaagacacagggggcctgggg
agcatccttgtgaccttcctggatgaaggcaggacggggctggtgacaaaggaccagctc
ttgagcctcccggaaagcttccgcacgctgcccccacaggctgtggagttcattgtgtgc
cgagtgaaacctgccgacggtgagatggaatggaatccaaaggttactaggtacattcat
cataaaattgttggaaaattgcatgatgcaaaagtagtattggctctggggaatactgtt
tggattgacccaatggtgcatgttacaaaacttccaaacctgaaaacttccatcattgat
tataatgttcgtgcagagattctgtccacggggatgggcatcgataattcagaacacgtg
caacaactgaaattgctttgcaagggaacggacatgccggcttgtgatggtggcctcggc
cagaccacggtgacttccccagagaaagaggctgctgctgtatctggggctcggcaggag
gatgcgcaagcgccagggaagtccacctctagctccagctccagcgccagcgccagctcc
atgactgactctgctcaccacagtccagataacctgtgggagaaagctgactttgaattt
tatacagaatctgaatctgcacccaccagagatgcttgtgctactgcaagtgcacctcca
catcagaaaagcttgcatccacaaataaagtggttccaaaaagaggatgtcgtcatctta
aagatacaaatacgggatgtccgtgattacagatgtaaatactttcaagaccgagtcatt
ttcagcgcctcggtgggagacaaggcgtacctggctgatctggagctgcaggccaacata
gtaaaggacgactgcaagtgcatcattgagaaccatgagcccgttatcacactgaccaag
gagaagaaggagccatggcgtggcctcctcaaacacaaggtgagcccccctggctgcggc
cggccctctgctgtgccacacctacccgctgagctgtactgttgtgttgcacagaaccct
aatgtgacctttgacttcgaccactgggaggactgtgaagaggacagccccatcgccaag
gttgcacattctagaagcctgtggggcaaagtggccgaggtggtgaagaacagcagcagc
tcttcagaggatgcgggaagcgagagtgaatga
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integrated database retrieval system
