KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138811248
Entry
138811248         CDS       T11079                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138811248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmer03400]
    138811248
DNA repair and recombination proteins [BR:dmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     138811248
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 138811248
NCBI-ProteinID: XP_069855073
LinkDB
Position
Unknown
AA seq 636 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSLDI
GNDGSAFVEVLVGSSAAGTSEQDYEVLLVTSSFMSPSESRSGSNLNRVRIFGSDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFIRLHSPPDKEETEAPAQKGTVTKLGQFRVKEEDE
SASSLRPGSLFFSRISKASPATSSEPAGPSYAAATLQASSSAAAAAASASPTSKAAGSAS
KPQEPPKGKRKLDLNIEERKAPSKPSAQLLSPTLKKPKLQAPTRAPTAGPVSTPVPASVP
EKPRGEGSKPKVARAGTQELGKVLQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPD
STHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEGGS
DSGSSGDEAPKRPRKRPQTKAKPPQAPEPSSPPKPPTPEMTKAASPGPQEDTDSEEQPAG
QDTGADESGDTEDELRRVAEQREQRQPPASGENGEDPYAGSTDENTDREDDRESPDLPVP
ELPDFFQGKHFFLYGEFPGDERRRLVRYVTAFNGELEDYMSDRVQFVITAQDWHPSFEEA
LMENPSLAFVRPRWIYSCNEKQRLLPHQLYGVVPQA
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgccggagatccgtctccgccacgtcgtgtcctgcagcagccaggactcgacccactgt
gcagaaaacctgctaaaagcagacacttaccggaaatggcgggctgccaaggcaggcgaa
aagactatctccgtggtcctgcagttggagaaggaggagcagatccacagcctggacatt
ggcaatgacggctcggccttcgtggaggtgctggtgggcagctcagcagccgggaccagc
gagcaagactatgaggttctcctggtcacctcgtccttcatgtccccttccgagagtcgc
agtggctccaacctcaaccgcgtccgcatatttgggtctgacaagttggtccgggccgct
gcagagaagcgctgggaccgtgtgaagattgtgtgcagccagccttacagcaaggactcc
ccctacggccttagttttatacggcttcacagccccccagacaaagaggagaccgaggcc
cctgcccagaaggggaccgtgaccaagcttggccagttcagagtgaaggaggaggacgag
agcgccagctccctgcggcccggctccctcttctttagccgcatcagcaaggcgtcccca
gccacctccagcgagcctgccgggcccagctacgctgcagccacactgcaggcctcgagc
tccgccgccgccgccgccgcctccgcttctcccacgtccaaggctgcaggcagcgcctcc
aagcctcaggagccccccaaagggaagaggaagttggatttgaacatagaagaaaggaag
gcccctagcaagccatcagcccagcttttgtcacccaccctcaagaagcccaaattgcaa
gctcccacccgggccccaactgcaggccccgtgtccaccccagtgccggcctctgtacca
gagaagcctcggggagaaggctctaagcccaaggtcgcccgggccggcacgcaggagctg
gggaaggtgcttcagggcgtggtagtggtgctgagcggcttccagaaccccttccgctcc
gagctgcgggacaaggccctggagctgggggccaagtaccggccagactggaccccggac
agcacccacctcatctgtgcctttgccaacacccccaagtacagccaggtcctgggcctg
ggaggccgcattgtgcgcaaagaatgggtgctggactgtcaccgcatgcgccggaggctc
ccctcccgaaggtacctcatggcggggcctggctccagcagtgaggacgaggggggctcc
gacagcggcagcagtggggacgaagcccccaagcgtccccgaaagcgtccacagaccaaa
gctaagcccccccaggcgccagaacccagctcaccccccaagcccccaacccctgaaatg
accaaagcagcctctccaggaccccaggaagatacagatagtgaggagcagccggcagga
caggacaccggggcggacgagtccggggacacggaggatgagctgcggagggtggcagag
cagagggagcagcggcagcccccagcgtccggggagaacggcgaggacccgtacgcgggc
tccacggacgagaacacggaccgtgaagacgacagggagtccccggacctgccggttccc
gagctcccagacttcttccagggcaagcacttcttcctgtacggcgagttccccggggat
gagcgccggaggctcgtccgctacgtcacagccttcaacggggagctcgaggactatatg
agcgaccgagtccagtttgtgatcacagcccaggactggcatcccagcttcgaggaggcc
ctgatggaaaacccttccttggcgttcgtccgtccccgatggatctactcctgcaatgag
aagcagaggttacttcctcaccagctgtacggggtggtgccccaggcctga

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