Dipodomys merriami (Merriam's kangaroo rat): 138811400
Help
Entry
138811400 CDS
T11079
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138811400
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138811400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
CoV_NSP2_N
Motif
Other DBs
NCBI-GeneID:
138811400
NCBI-ProteinID:
XP_069855242
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MDREDAKEFKERCSQCAAVSWGLTDEGKYYCTSCHNVTERSKEVTDTGAIPNARIKAISR
GQKNKKKLEKGCDWYVCEGFQYILYHQAEALKTLGVGPELKNEVLHNFWKRYLEKSKQAY
CKNPIYTSGRQAKVLEDNLPHSDWASEPELLSDSTWAPESGAESLSDSQTSKHFPSTRAT
QPESVFICSGSLDGVEYSDRKEKGIVKMTVPRTLALCGLALLWQREAIALSDLLRFVEED
HIPYINAYQHFPEEMKLYGRDKGIFTIESWPDYEEIYKNMIEIAIFLDLPRFPDITEDCY
LHPNVLCMKYLMEVNLPDEMHGLTSQVVKMTGIGEVDFLTFDPIAKMKRAVKYDVQAVAV
IVVVLKLLFLLDDNLEWSLSDHAEEYNGMNDEDKPWFNFRKWYQVMKKSFDKKKQDWEEA
RAKYMWKSEKPLYYSHTDRPVAYKRREMVENLQRQFSTLADSTPTIEKKSPSSFQFSWTA
EDTCFHSHRLQGVLLKKGQALVTKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSYQFIIS
AFSFLLRIKTSLLHEEVSLVEKKLFKKKYSEAKQSSSRSKREKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagaggacgcgaaagagtttaaagaacgctgttcccagtgtgctgctgtctcc
tggggtctcactgatgaaggcaaatattactgcacttcttgccacaatgttacagagaga
tctaaggaagttacagacacaggggctattccaaatgccaggataaaagccatcagcagg
gggcagaaaaacaaaaaaaagcttgagaaaggctgtgattggtatgtgtgtgaaggtttt
cagtacatactttatcaccaagcagaagccctgaagaccctcggagtaggcccagagtta
aagaatgaagttttacataatttctggaagcgctaccttgagaagagcaagcaggcatat
tgtaaaaacccaatatataccagtggaaggcaagcgaaggtattagaagataatctgcca
cattcagactgggctagcgagcctgagctgctcagcgactctacctgggctcctgaaagc
ggagccgagtctctgtctgactcccagacctcaaagcatttccccagcaccagagcaaca
caaccagagtctgtgttcatctgttcgggctctcttgatggagtcgagtactcagaccgg
aaggagaagggcatcgtgaagatgactgtgccgcggacgctggctctctgtggtctggct
ctgctgtggcagagagaggcgattgctctttcagatcttctgagatttgttgaagaggac
catattccctacataaatgcttaccagcattttccagaagagatgaaattatatgggcga
gacaaaggaatctttactatagagtcttggcctgactatgaggagatctataaaaacatg
attgaaattgccatatttttagacttgccacgttttccagacataactgaagactgctac
ctccatcccaacgtcttgtgtatgaaatacttaatggaagtcaatctccctgatgaaatg
catggtttaacctcccaagttgtaaaaatgactggaataggagaagtggattttctgaca
tttgatccaatagctaaaatgaaaagggctgttaaatacgatgtgcaagctgtagctgtc
attgttgtagtattaaagctactctttctattggatgacaatttagagtggtctttgtct
gatcatgctgaagagtataatggaatgaatgatgaagataagccatggtttaacttcaga
aagtggtaccaagttatgaagaaaagttttgacaagaagaaacaagactgggaagaagca
agggccaagtacatgtggaaaagcgaaaagccgctgtactactcacacactgacagacca
gtagcttataaaagaagagaaatggtggagaatctacaaagacagtttagtacactggct
gattcaacaccaactattgaaaaaaagtccccttccagcttccagttcagctggactgcg
gaggacacctgtttccacagccatcgcctccagggagtcctgctaaagaaaggccaggcc
ctagtgaccaagaactcattgtattggctcagtacccagaaattctgtaaaagttactgc
aaacatgtgacaacctatgaagagtcaaatttttcactgagttaccagtttataataagt
gcattctccttcttgctgagaataaagacttccttactccatgaagaagtaagcttagta
gaaaaaaaactttttaaaaaaaaatacagtgaagcaaaacagagctcttcaagatccaaa
agagagaaaaaataa
DBGET
integrated database retrieval system
