Dipodomys merriami (Merriam's kangaroo rat): 138811744
Help
Entry
138811744 CDS
T11079
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138811744 (Ddx17)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138811744 (Ddx17)
Spliceosome [BR:
dmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138811744 (Ddx17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138811744
NCBI-ProteinID:
XP_069855633
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRASYANGSGY
GSPNSAFGAQAGQYTYSQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSAGRSSQSSSQQF
SAIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgagatcgagatcgtggcggatttggagca
agaggtggtggtggccttcccccgaagaaattcggtaaccctggggagcgcctacgtaag
aagaagtgggatctgagtgagcttcccaagtttgagaagaacttctatgtagaacatcca
gaagtggccaggctcactccatatgaggttgatgagctacgccgaaagaaggagattaca
gtgagaggtggagatgtttgtcctaaacctgtctttgcctttcatcatgctaatttccca
caatatgtaatggatgtgttgatggatcagcacttcacagaacctactcctatccagtgc
cagggatttccattggctcttagtggccgggatatggtgggcattgctcagaccggttct
ggcaagacattggcgtatttgctgcctgcaattgttcatattaaccaccagccatacttg
gaaagaggagacggcccaatttgtctagtgctggctcccaccagagagcttgctcagcaa
gtacagcaggtagctgatgactatggcaagtgttccaggttgaagagtacatgcatttat
ggaggtgcgcctaaaggtccgcagattcgagatctggaaagaggtgtggagatctgcata
gctactcctggaagactgatagattttctggagtcgggaaagacaaaccttcgccgatgt
acttaccttgtgctggacgaggctgacaggatgcttgatatgggcttcgaaccccagatc
cgtaaaattgttgatcagatcaggcccgatcggcagacactgatgtggagtgcaacatgg
ccaaaggaagtgcgacaacttgctgaggacttcctccgagactacacccagatcaacgtg
ggcaatctggagctgagtgccaaccacaacatccttcagatcgtggatgtctgtatggag
agtgaaaaggaccacaagttgattcaactgatggaggaaataatggctgaaaaggaaaac
aaaacaatcatctttgtggagacaaagaggcgctgtgatgacctcactcgcaggatgcgc
agggacggttggcctgctatgtgtatccatggagacaagagtcaaccagaaagagactgg
gtccttaatgagtttcgttctggaaaggctcccattctcattgccacggatgtagcctcc
cgtgggctagacgtggaagatgtcaagtttgtgatcaactatgactatcctaacagctca
gaggattacgtgcaccgcattggccgaacagcccggagcaccaacaagggcactgcctat
actttcttcaccccagggaacctaaagcaggccagagagctgatcaaagtgctagaagag
gccaatcaggccattaatccaaagctgatgcagctggtggaccacagaggcggcggcggc
ggcgggggaggccgctctcgataccggactacttcttctgccaacaaccccaacctgatg
tatcaggatgaatgtgaccggaggcttcgaggagtcaaagatggtggacggagagattct
gcgagctatcgggatcgcagtgaaaccgatagagccagctatgctaatggcagtggctat
ggaagtccgaattctgcctttggagcccaagcaggccaatatacctacagtcaaggcacc
tatggggcagctgcctatggcaccagtggctatacagcccaggagtatggtgctggtaca
tacggagctagtagcaccacctcagctgggagaagttctcagagctccagccagcagttt
agcgcgataggccggtctgggcagcagccgcagcctctgatgtcacaacagtttgcacag
cctccaggagctaccaacatgataggttacatggggcagacggcctaccagtacccgccc
ccgcccccgcccccgcccccctcgcggaagtga
DBGET
integrated database retrieval system
